RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SND1-IT1Q9HBX3 110 aa2.83□□□□□ -1.96
NIPBL-205ENST00000505998 FAT1Q14517 4588 aa2.82□□□□□ -1.96
NIPBL-205ENST00000505998 LOC110117498A0A087WWA1 95 aa2.82□□□□□ -1.96
NIPBL-205ENST00000505998 H3BQ85 93 aa2.81□□□□□ -1.96
NIPBL-205ENST00000505998 KRTAP10-4P60372 401 aaPredicted RBP2.81□□□□□ -1.96
NIPBL-205ENST00000505998 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
NIPBL-205ENST00000505998 TOMM7Q9P0U1 55 aa2.81□□□□□ -1.96
NIPBL-205ENST00000505998 NCR3O14931 201 aa2.8□□□□□ -1.96
NIPBL-205ENST00000505998 Q8NDZ9 215 aa2.8□□□□□ -1.96
NIPBL-205ENST00000505998 LINC00308Q8TCZ7 52 aa2.8□□□□□ -1.96
NIPBL-205ENST00000505998 ZCCHC13Q8WW36 166 aaKnown RBP2.8□□□□□ -1.96
NIPBL-205ENST00000505998 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
NIPBL-205ENST00000505998 ROMO1P60602 79 aa2.79□□□□□ -1.96
NIPBL-205ENST00000505998 LINC00208Q96KT6 92 aa2.79□□□□□ -1.96
NIPBL-205ENST00000505998 HIGD2AQ9BW72 106 aa2.79□□□□□ -1.96
NIPBL-205ENST00000505998 IGKV2-24A0A0C4DH68 120 aa2.78□□□□□ -1.96
NIPBL-205ENST00000505998 SPRR1AP35321 89 aa2.78□□□□□ -1.96
NIPBL-205ENST00000505998 HAMPP81172 84 aa2.78□□□□□ -1.96
NIPBL-205ENST00000505998 Q6ZQT0 140 aa2.78□□□□□ -1.96
NIPBL-205ENST00000505998 KRTAP13-1Q8IUC0 172 aa2.78□□□□□ -1.96
NIPBL-205ENST00000505998 LINC01558Q9Y6Z2 57 aa2.78□□□□□ -1.96
NIPBL-205ENST00000505998 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.97
NIPBL-205ENST00000505998 IGLV6-57P01721 117 aa2.77□□□□□ -1.97
NIPBL-205ENST00000505998 SRRM2Q9UQ35 2752 aaKnown RBP2.76□□□□□ -1.97
NIPBL-205ENST00000505998 KCNQ1DNQ9H478 68 aa2.76□□□□□ -1.97
NIPBL-205ENST00000505998 TNXBP22105 4242 aa2.75□□□□□ -1.97
NIPBL-205ENST00000505998 LINC00158P58513 81 aa2.75□□□□□ -1.97
NIPBL-205ENST00000505998 PCLOQ9Y6V0 5065 aa2.75□□□□□ -1.97
NIPBL-205ENST00000505998 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
NIPBL-205ENST00000505998 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
NIPBL-205ENST00000505998 H3BPC8 53 aa2.74□□□□□ -1.97
NIPBL-205ENST00000505998 K7ERS5 55 aa2.74□□□□□ -1.97
NIPBL-205ENST00000505998 PSORS1C2Q9UIG4 136 aa2.74□□□□□ -1.97
NIPBL-205ENST00000505998 A0A1W2PNM2 257 aa2.73□□□□□ -1.97
NIPBL-205ENST00000505998 SPAG11AQ6PDA7 123 aa2.73□□□□□ -1.97
NIPBL-205ENST00000505998 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
NIPBL-205ENST00000505998 SMIM11BQ8TCY0 68 aa2.73□□□□□ -1.97
NIPBL-205ENST00000505998 ETDCA0A1B0GVM5 59 aa2.72□□□□□ -1.97
NIPBL-205ENST00000505998 Q5VSD8 79 aa2.72□□□□□ -1.97
NIPBL-205ENST00000505998 CSAG1Q6PB30 78 aa2.72□□□□□ -1.97
NIPBL-205ENST00000505998 FLG2Q5D862 2391 aaPredicted RBP2.72□□□□□ -1.97
NIPBL-205ENST00000505998 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
NIPBL-205ENST00000505998 H0Y9P7 68 aa2.71□□□□□ -1.98
NIPBL-205ENST00000505998 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
NIPBL-205ENST00000505998 Q6ZRX8 168 aa2.71□□□□□ -1.98
NIPBL-205ENST00000505998 A0A087WSZ3 146 aa2.7□□□□□ -1.98
NIPBL-205ENST00000505998 RPL37AP61513 92 aaKnown RBP2.7□□□□□ -1.98
NIPBL-205ENST00000505998 SPINK6Q6UWN8 80 aa2.7□□□□□ -1.98
NIPBL-205ENST00000505998 IGLV5-48A0A075B6I7 105 aa2.69□□□□□ -1.98
NIPBL-205ENST00000505998 SMR3BP02814 79 aaPredicted RBP2.69□□□□□ -1.98
NIPBL-205ENST00000505998 SPRR1BP22528 89 aa2.69□□□□□ -1.98
NIPBL-205ENST00000505998 SPINK7P58062 85 aa2.69□□□□□ -1.98
NIPBL-205ENST00000505998 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.69□□□□□ -1.98
NIPBL-205ENST00000505998 COA5Q86WW8 74 aa2.69□□□□□ -1.98
NIPBL-205ENST00000505998 A8MWP4 228 aa2.68□□□□□ -1.98
NIPBL-205ENST00000505998 COX7BP24311 80 aa2.68□□□□□ -1.98
NIPBL-205ENST00000505998 C1orf137Q5JT78 98 aa2.68□□□□□ -1.98
NIPBL-205ENST00000505998 DMBT1Q9UGM3 2413 aaPredicted RBP2.68□□□□□ -1.98
NIPBL-205ENST00000505998 MT1HL1P0DM35 61 aa2.67□□□□□ -1.98
NIPBL-205ENST00000505998 PRLHP81277 87 aa2.67□□□□□ -1.98
NIPBL-205ENST00000505998 HRES1P13985 223 aa2.66□□□□□ -1.98
NIPBL-205ENST00000505998 LINC00575Q6W349 94 aa2.66□□□□□ -1.98
NIPBL-205ENST00000505998 SPRR4Q96PI1 79 aa2.66□□□□□ -1.98
NIPBL-205ENST00000505998 R4GN34 69 aa2.66□□□□□ -1.98
NIPBL-205ENST00000505998 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
NIPBL-205ENST00000505998 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
NIPBL-205ENST00000505998 UQCR11O14957 56 aa2.64□□□□□ -1.99
NIPBL-205ENST00000505998 P0C880 135 aa2.64□□□□□ -1.99
NIPBL-205ENST00000505998 DMAC1Q96GE9 116 aa2.64□□□□□ -1.99
NIPBL-205ENST00000505998 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
NIPBL-205ENST00000505998 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
NIPBL-205ENST00000505998 Q6ZQY7 126 aa2.62□□□□□ -1.99
NIPBL-205ENST00000505998 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
NIPBL-205ENST00000505998 HERC1Q15751 4861 aa2.6□□□□□ -1.99
NIPBL-205ENST00000505998 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
NIPBL-205ENST00000505998 SSBP3-AS1Q7Z2R9 100 aa2.6□□□□□ -1.99
NIPBL-205ENST00000505998 SPINK1P00995 79 aa2.57□□□□□ -2
NIPBL-205ENST00000505998 A0A1B0GU33 70 aa2.56□□□□□ -2
NIPBL-205ENST00000505998 A0A1B0GU69 56 aa2.55□□□□□ -2
NIPBL-205ENST00000505998 K7EQZ3 153 aa2.53□□□□□ -2
NIPBL-205ENST00000505998 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
NIPBL-205ENST00000505998 DEFB105AQ8NG35 78 aa2.53□□□□□ -2
NIPBL-205ENST00000505998 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
NIPBL-205ENST00000505998 Q96NJ1 140 aa2.52□□□□□ -2.01
NIPBL-205ENST00000505998 MUC17Q685J3 4493 aa2.51□□□□□ -2.01
NIPBL-205ENST00000505998 TPRXLQ17RH7 258 aa2.51□□□□□ -2.01
NIPBL-205ENST00000505998 LINC00472Q9H8W2 130 aa2.51□□□□□ -2.01
NIPBL-205ENST00000505998 LRP2P98164 4655 aa2.5□□□□□ -2.01
NIPBL-205ENST00000505998 A0A0G2JQZ4 141 aa2.5□□□□□ -2.01
NIPBL-205ENST00000505998 TP53AIP1Q9HCN2 124 aa2.5□□□□□ -2.01
NIPBL-205ENST00000505998 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
NIPBL-205ENST00000505998 LPAP08519 4548 aa2.48□□□□□ -2.01
NIPBL-205ENST00000505998 ACYP2P14621 99 aa2.48□□□□□ -2.01
NIPBL-205ENST00000505998 WFDC13Q8IUB5 93 aa2.48□□□□□ -2.01
NIPBL-205ENST00000505998 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
NIPBL-205ENST00000505998 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
NIPBL-205ENST00000505998 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
NIPBL-205ENST00000505998 PCOTHQ58A44 107 aa2.45□□□□□ -2.02
NIPBL-205ENST00000505998 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
NIPBL-205ENST00000505998 RPL37P61927 97 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms