RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MT1BP07438 61 aa5.3□□□□□ -1.56
VTI1A-208ENST00000494728 ACYP1P07311 99 aa5.29□□□□□ -1.56
VTI1A-208ENST00000494728 NEBP20929 6669 aa5.28□□□□□ -1.56
VTI1A-208ENST00000494728 FAM240AA0A1B0GVK7 77 aa5.26□□□□□ -1.57
VTI1A-208ENST00000494728 LCA10Q71F78 164 aa5.26□□□□□ -1.57
VTI1A-208ENST00000494728 S4R3F8 94 aa5.25□□□□□ -1.57
VTI1A-208ENST00000494728 FAM236AA0A1B0GUQ0 79 aa5.24□□□□□ -1.57
VTI1A-208ENST00000494728 FAM236BA0A1B0GV22 79 aa5.24□□□□□ -1.57
VTI1A-208ENST00000494728 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
VTI1A-208ENST00000494728 C1orf64Q8NEQ6 169 aa5.23□□□□□ -1.57
VTI1A-208ENST00000494728 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
VTI1A-208ENST00000494728 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
VTI1A-208ENST00000494728 HIST1H4AP62805 103 aaKnown RBP5.22□□□□□ -1.57
VTI1A-208ENST00000494728 ATP5EP2Q5VTU8 51 aa5.22□□□□□ -1.57
VTI1A-208ENST00000494728 H3BS24 57 aa5.21□□□□□ -1.58
VTI1A-208ENST00000494728 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
VTI1A-208ENST00000494728 A6NN06 94 aa5.19□□□□□ -1.58
VTI1A-208ENST00000494728 Q5VV11 94 aa5.19□□□□□ -1.58
VTI1A-208ENST00000494728 CSAG1Q6PB30 78 aa5.19□□□□□ -1.58
VTI1A-208ENST00000494728 A0A087WVE0 104 aa5.18□□□□□ -1.58
VTI1A-208ENST00000494728 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
VTI1A-208ENST00000494728 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
VTI1A-208ENST00000494728 J3QR89 54 aa5.14□□□□□ -1.59
VTI1A-208ENST00000494728 KLKP1Q107X0 134 aa5.14□□□□□ -1.59
VTI1A-208ENST00000494728 TRAV22A0A0B4J277 110 aa5.13□□□□□ -1.59
VTI1A-208ENST00000494728 CYP4F30PQ9H0H9 118 aa5.13□□□□□ -1.59
VTI1A-208ENST00000494728 KMT2DO14686 5537 aa5.09□□□□□ -1.59
VTI1A-208ENST00000494728 H0Y9P7 68 aa5.08□□□□□ -1.6
VTI1A-208ENST00000494728 UQCRQO14949 82 aa5.08□□□□□ -1.6
VTI1A-208ENST00000494728 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
VTI1A-208ENST00000494728 MDN1Q9NU22 5596 aa5.06□□□□□ -1.6
VTI1A-208ENST00000494728 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
VTI1A-208ENST00000494728 ATOX1O00244 68 aa5.04□□□□□ -1.6
VTI1A-208ENST00000494728 K7ERU9 68 aa5.01□□□□□ -1.61
VTI1A-208ENST00000494728 LINC00208Q96KT6 92 aa5.01□□□□□ -1.61
VTI1A-208ENST00000494728 OCR1Q9BZK8 76 aa5.01□□□□□ -1.61
VTI1A-208ENST00000494728 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
VTI1A-208ENST00000494728 SCGB1A1P11684 91 aa4.99□□□□□ -1.61
VTI1A-208ENST00000494728 MP68P56378 58 aa4.99□□□□□ -1.61
VTI1A-208ENST00000494728 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
VTI1A-208ENST00000494728 MT-ATP8P03928 68 aa4.97□□□□□ -1.61
VTI1A-208ENST00000494728 IMUPQ9GZP8 106 aa4.97□□□□□ -1.61
VTI1A-208ENST00000494728 H0YAA0 97 aa4.96□□□□□ -1.62
VTI1A-208ENST00000494728 NDUFC1O43677 76 aa4.94□□□□□ -1.62
VTI1A-208ENST00000494728 MT1XP80297 61 aa4.93□□□□□ -1.62
VTI1A-208ENST00000494728 ADM2Q7Z4H4 148 aa4.93□□□□□ -1.62
VTI1A-208ENST00000494728 H3BPC8 53 aa4.9□□□□□ -1.63
VTI1A-208ENST00000494728 A8MUN3 132 aa4.89□□□□□ -1.63
VTI1A-208ENST00000494728 P0C880 135 aa4.86□□□□□ -1.63
VTI1A-208ENST00000494728 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
VTI1A-208ENST00000494728 TRAV7A0A075B6U4 112 aa4.85□□□□□ -1.63
VTI1A-208ENST00000494728 SMIM20Q8N5G0 67 aa4.85□□□□□ -1.63
VTI1A-208ENST00000494728 SPRR2EP22531 72 aa4.81□□□□□ -1.64
VTI1A-208ENST00000494728 SPRR2BP35325 72 aa4.81□□□□□ -1.64
VTI1A-208ENST00000494728 SPRR2AP35326 72 aa4.81□□□□□ -1.64
VTI1A-208ENST00000494728 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
VTI1A-208ENST00000494728 DMAC1Q96GE9 116 aa4.8□□□□□ -1.64
VTI1A-208ENST00000494728 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
VTI1A-208ENST00000494728 KRTAP12-2P59991 146 aa4.78□□□□□ -1.64
VTI1A-208ENST00000494728 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
VTI1A-208ENST00000494728 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
VTI1A-208ENST00000494728 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
VTI1A-208ENST00000494728 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
VTI1A-208ENST00000494728 R4GN34 69 aa4.78□□□□□ -1.64
VTI1A-208ENST00000494728 M0QZ58 72 aa4.77□□□□□ -1.65
VTI1A-208ENST00000494728 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
VTI1A-208ENST00000494728 C20orf197Q8N268 126 aa4.73□□□□□ -1.65
VTI1A-208ENST00000494728 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
VTI1A-208ENST00000494728 ACYP2P14621 99 aa4.71□□□□□ -1.66
VTI1A-208ENST00000494728 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
VTI1A-208ENST00000494728 LINC01554Q52M75 96 aa4.71□□□□□ -1.66
VTI1A-208ENST00000494728 CHKB-CPT1BH3BT56 60 aa4.67□□□□□ -1.66
VTI1A-208ENST00000494728 SPRR2DP22532 72 aa4.65□□□□□ -1.67
VTI1A-208ENST00000494728 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
VTI1A-208ENST00000494728 SPANXA2-OT1Q8N9U9 137 aa4.64□□□□□ -1.67
VTI1A-208ENST00000494728 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
VTI1A-208ENST00000494728 COX7CP15954 63 aa4.63□□□□□ -1.67
VTI1A-208ENST00000494728 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
VTI1A-208ENST00000494728 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
VTI1A-208ENST00000494728 ANAPC13Q9BS18 74 aa4.56□□□□□ -1.68
VTI1A-208ENST00000494728 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
VTI1A-208ENST00000494728 COA5Q86WW8 74 aa4.54□□□□□ -1.68
VTI1A-208ENST00000494728 H7BZZ5 65 aa4.53□□□□□ -1.68
VTI1A-208ENST00000494728 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
VTI1A-208ENST00000494728 CCDC179H3BU77 68 aa4.46□□□□□ -1.7
VTI1A-208ENST00000494728 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
VTI1A-208ENST00000494728 SEC61GP60059 68 aa4.41□□□□□ -1.7
VTI1A-208ENST00000494728 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
VTI1A-208ENST00000494728 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
VTI1A-208ENST00000494728 MT1EP04732 61 aa4.37□□□□□ -1.71
VTI1A-208ENST00000494728 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
VTI1A-208ENST00000494728 ATP5EP56381 51 aaPredicted RBP4.34□□□□□ -1.71
VTI1A-208ENST00000494728 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
VTI1A-208ENST00000494728 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
VTI1A-208ENST00000494728 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
VTI1A-208ENST00000494728 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
VTI1A-208ENST00000494728 A0A0D9SG42 100 aa4.31□□□□□ -1.72
VTI1A-208ENST00000494728 A0A1B0GU33 70 aa4.31□□□□□ -1.72
VTI1A-208ENST00000494728 A0A1B0GU69 56 aa4.31□□□□□ -1.72
VTI1A-208ENST00000494728 TMEM258P61165 79 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms