RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 CXCL6P80162 114 aa3.95□□□□□ -1.78
LRCH3-219ENST00000494069 F8W1H4 67 aa3.94□□□□□ -1.78
LRCH3-219ENST00000494069 C5orf47Q569G3 176 aa3.94□□□□□ -1.78
LRCH3-219ENST00000494069 A0A1B0GV90 55 aa3.9□□□□□ -1.79
LRCH3-219ENST00000494069 C1orf64Q8NEQ6 169 aa3.9□□□□□ -1.79
LRCH3-219ENST00000494069 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
LRCH3-219ENST00000494069 S4R3F8 94 aa3.89□□□□□ -1.79
LRCH3-219ENST00000494069 NEBP20929 6669 aa3.88□□□□□ -1.79
LRCH3-219ENST00000494069 LCA10Q71F78 164 aa3.88□□□□□ -1.79
LRCH3-219ENST00000494069 FAM236AA0A1B0GUQ0 79 aa3.87□□□□□ -1.79
LRCH3-219ENST00000494069 FAM236BA0A1B0GV22 79 aa3.87□□□□□ -1.79
LRCH3-219ENST00000494069 MT1BP07438 61 aa3.86□□□□□ -1.79
LRCH3-219ENST00000494069 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
LRCH3-219ENST00000494069 A0A087WVE0 104 aa3.85□□□□□ -1.79
LRCH3-219ENST00000494069 CSAG1Q6PB30 78 aa3.85□□□□□ -1.79
LRCH3-219ENST00000494069 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
LRCH3-219ENST00000494069 CYP4F30PQ9H0H9 118 aa3.84□□□□□ -1.79
LRCH3-219ENST00000494069 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
LRCH3-219ENST00000494069 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
LRCH3-219ENST00000494069 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
LRCH3-219ENST00000494069 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
LRCH3-219ENST00000494069 ACYP1P07311 99 aa3.81□□□□□ -1.8
LRCH3-219ENST00000494069 Q5VV11 94 aa3.81□□□□□ -1.8
LRCH3-219ENST00000494069 A6NN06 94 aa3.8□□□□□ -1.8
LRCH3-219ENST00000494069 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
LRCH3-219ENST00000494069 FAM240AA0A1B0GVK7 77 aa3.79□□□□□ -1.8
LRCH3-219ENST00000494069 J3QR89 54 aa3.79□□□□□ -1.8
LRCH3-219ENST00000494069 KLKP1Q107X0 134 aa3.79□□□□□ -1.8
LRCH3-219ENST00000494069 LOC101927531A0A1B0GV80 90 aa3.77□□□□□ -1.81
LRCH3-219ENST00000494069 HIST1H4AP62805 103 aaKnown RBP3.76□□□□□ -1.81
LRCH3-219ENST00000494069 KRTAP10-5P60370 271 aa3.75□□□□□ -1.81
LRCH3-219ENST00000494069 H0Y9P7 68 aa3.74□□□□□ -1.81
LRCH3-219ENST00000494069 UQCRQO14949 82 aa3.74□□□□□ -1.81
LRCH3-219ENST00000494069 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
LRCH3-219ENST00000494069 K7ERU9 68 aa3.73□□□□□ -1.81
LRCH3-219ENST00000494069 ATP5EP2Q5VTU8 51 aa3.73□□□□□ -1.81
LRCH3-219ENST00000494069 KMT2DO14686 5537 aa3.71□□□□□ -1.82
LRCH3-219ENST00000494069 NDUFC1O43677 76 aa3.7□□□□□ -1.82
LRCH3-219ENST00000494069 LINC00643Q86TS7 51 aa3.7□□□□□ -1.82
LRCH3-219ENST00000494069 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
LRCH3-219ENST00000494069 ATOX1O00244 68 aa3.69□□□□□ -1.82
LRCH3-219ENST00000494069 LINC00208Q96KT6 92 aa3.69□□□□□ -1.82
LRCH3-219ENST00000494069 CRIPTQ9P021 101 aa3.69□□□□□ -1.82
LRCH3-219ENST00000494069 ADM2Q7Z4H4 148 aa3.68□□□□□ -1.82
LRCH3-219ENST00000494069 H0YAA0 97 aa3.67□□□□□ -1.82
LRCH3-219ENST00000494069 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
LRCH3-219ENST00000494069 A8MUN3 132 aa3.64□□□□□ -1.83
LRCH3-219ENST00000494069 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
LRCH3-219ENST00000494069 MP68P56378 58 aa3.62□□□□□ -1.83
LRCH3-219ENST00000494069 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
LRCH3-219ENST00000494069 P0C880 135 aa3.61□□□□□ -1.83
LRCH3-219ENST00000494069 MT1XP80297 61 aa3.6□□□□□ -1.83
LRCH3-219ENST00000494069 MT-ATP8P03928 68 aa3.58□□□□□ -1.84
LRCH3-219ENST00000494069 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
LRCH3-219ENST00000494069 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
LRCH3-219ENST00000494069 DMAC1Q96GE9 116 aa3.56□□□□□ -1.84
LRCH3-219ENST00000494069 H3BPC8 53 aa3.55□□□□□ -1.84
LRCH3-219ENST00000494069 SCGB1A1P11684 91 aa3.55□□□□□ -1.84
LRCH3-219ENST00000494069 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
LRCH3-219ENST00000494069 R4GN34 69 aa3.55□□□□□ -1.84
LRCH3-219ENST00000494069 M0QZ58 72 aa3.54□□□□□ -1.84
LRCH3-219ENST00000494069 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
LRCH3-219ENST00000494069 SMIM20Q8N5G0 67 aa3.53□□□□□ -1.84
LRCH3-219ENST00000494069 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
LRCH3-219ENST00000494069 LINC01554Q52M75 96 aa3.51□□□□□ -1.85
LRCH3-219ENST00000494069 C20orf197Q8N268 126 aa3.5□□□□□ -1.85
LRCH3-219ENST00000494069 SPRR2EP22531 72 aa3.49□□□□□ -1.85
LRCH3-219ENST00000494069 SPRR2BP35325 72 aa3.49□□□□□ -1.85
LRCH3-219ENST00000494069 SPRR2AP35326 72 aa3.49□□□□□ -1.85
LRCH3-219ENST00000494069 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
LRCH3-219ENST00000494069 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
LRCH3-219ENST00000494069 TRAV7A0A075B6U4 112 aa3.47□□□□□ -1.85
LRCH3-219ENST00000494069 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
LRCH3-219ENST00000494069 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
LRCH3-219ENST00000494069 MT3P25713 68 aa3.46□□□□□ -1.86
LRCH3-219ENST00000494069 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
LRCH3-219ENST00000494069 ACYP2P14621 99 aa3.45□□□□□ -1.86
LRCH3-219ENST00000494069 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
LRCH3-219ENST00000494069 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
LRCH3-219ENST00000494069 SNURFQ9Y675 71 aa3.41□□□□□ -1.86
LRCH3-219ENST00000494069 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
LRCH3-219ENST00000494069 CHKB-CPT1BH3BT56 60 aa3.39□□□□□ -1.87
LRCH3-219ENST00000494069 COX7CP15954 63 aa3.39□□□□□ -1.87
LRCH3-219ENST00000494069 ANAPC13Q9BS18 74 aa3.39□□□□□ -1.87
LRCH3-219ENST00000494069 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
LRCH3-219ENST00000494069 SPRR2DP22532 72 aa3.36□□□□□ -1.87
LRCH3-219ENST00000494069 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
LRCH3-219ENST00000494069 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
LRCH3-219ENST00000494069 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
LRCH3-219ENST00000494069 SPANXA2-OT1Q8N9U9 137 aa3.32□□□□□ -1.88
LRCH3-219ENST00000494069 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
LRCH3-219ENST00000494069 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
LRCH3-219ENST00000494069 H7BZZ5 65 aa3.28□□□□□ -1.88
LRCH3-219ENST00000494069 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
LRCH3-219ENST00000494069 CCDC179H3BU77 68 aa3.27□□□□□ -1.89
LRCH3-219ENST00000494069 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
LRCH3-219ENST00000494069 COA5Q86WW8 74 aa3.26□□□□□ -1.89
LRCH3-219ENST00000494069 CYSTM1Q9H1C7 97 aa3.25□□□□□ -1.89
LRCH3-219ENST00000494069 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
LRCH3-219ENST00000494069 A0A0D9SG42 100 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms