RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
SRSF4-204ENST00000489898 OCR1Q9BZK8 76 aa5.63□□□□□ -1.51
SRSF4-204ENST00000489898 C5orf47Q569G3 176 aa5.61□□□□□ -1.51
SRSF4-204ENST00000489898 Q5W150 140 aa5.59□□□□□ -1.51
SRSF4-204ENST00000489898 TRAV22A0A0B4J277 110 aa5.58□□□□□ -1.52
SRSF4-204ENST00000489898 H0Y9P7 68 aa5.58□□□□□ -1.52
SRSF4-204ENST00000489898 H3BPC8 53 aa5.58□□□□□ -1.52
SRSF4-204ENST00000489898 NDUFC1O43677 76 aa5.58□□□□□ -1.52
SRSF4-204ENST00000489898 KLKP1Q107X0 134 aa5.56□□□□□ -1.52
SRSF4-204ENST00000489898 SNURFQ9Y675 71 aa5.56□□□□□ -1.52
SRSF4-204ENST00000489898 TMEM258P61165 79 aa5.53□□□□□ -1.52
SRSF4-204ENST00000489898 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
SRSF4-204ENST00000489898 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
SRSF4-204ENST00000489898 H1FX-AS1Q4G0G2 97 aa5.5□□□□□ -1.53
SRSF4-204ENST00000489898 LOC101927531A0A1B0GV80 90 aa5.49□□□□□ -1.53
SRSF4-204ENST00000489898 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
SRSF4-204ENST00000489898 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
SRSF4-204ENST00000489898 C7orf65Q6ZTY9 151 aa5.47□□□□□ -1.53
SRSF4-204ENST00000489898 IGKV2D-30A0A075B6S6 120 aa5.46□□□□□ -1.54
SRSF4-204ENST00000489898 H7BZZ5 65 aa5.46□□□□□ -1.54
SRSF4-204ENST00000489898 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
SRSF4-204ENST00000489898 CYSTM1Q9H1C7 97 aa5.44□□□□□ -1.54
SRSF4-204ENST00000489898 MT1BP07438 61 aa5.42□□□□□ -1.54
SRSF4-204ENST00000489898 C4orf26Q17RF5 130 aa5.42□□□□□ -1.54
SRSF4-204ENST00000489898 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
SRSF4-204ENST00000489898 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
SRSF4-204ENST00000489898 CYP4F30PQ9H0H9 118 aa5.36□□□□□ -1.55
SRSF4-204ENST00000489898 NEBP20929 6669 aa5.36□□□□□ -1.55
SRSF4-204ENST00000489898 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
SRSF4-204ENST00000489898 KRTAP6-3Q3LI67 103 aa5.35□□□□□ -1.55
SRSF4-204ENST00000489898 SERP1Q9Y6X1 66 aa5.35□□□□□ -1.55
SRSF4-204ENST00000489898 SPRR2GQ9BYE4 73 aa5.34□□□□□ -1.55
SRSF4-204ENST00000489898 LCA10Q71F78 164 aa5.33□□□□□ -1.56
SRSF4-204ENST00000489898 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
SRSF4-204ENST00000489898 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
SRSF4-204ENST00000489898 S4R3F8 94 aa5.28□□□□□ -1.56
SRSF4-204ENST00000489898 CHKB-CPT1BH3BT56 60 aa5.26□□□□□ -1.57
SRSF4-204ENST00000489898 ACYP2P14621 99 aa5.26□□□□□ -1.57
SRSF4-204ENST00000489898 A8MUN3 132 aa5.24□□□□□ -1.57
SRSF4-204ENST00000489898 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
SRSF4-204ENST00000489898 COA5Q86WW8 74 aa5.23□□□□□ -1.57
SRSF4-204ENST00000489898 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
SRSF4-204ENST00000489898 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
SRSF4-204ENST00000489898 KMT2DO14686 5537 aa5.22□□□□□ -1.57
SRSF4-204ENST00000489898 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
SRSF4-204ENST00000489898 Q5VV11 94 aa5.2□□□□□ -1.58
SRSF4-204ENST00000489898 CSAG1Q6PB30 78 aa5.19□□□□□ -1.58
SRSF4-204ENST00000489898 A6NN06 94 aa5.18□□□□□ -1.58
SRSF4-204ENST00000489898 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
SRSF4-204ENST00000489898 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
SRSF4-204ENST00000489898 V9GYY9 64 aa5.16□□□□□ -1.58
SRSF4-204ENST00000489898 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
SRSF4-204ENST00000489898 H0YAA0 97 aa5.09□□□□□ -1.59
SRSF4-204ENST00000489898 Q1T7F1 81 aa5.06□□□□□ -1.6
SRSF4-204ENST00000489898 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
SRSF4-204ENST00000489898 MT1XP80297 61 aa5.05□□□□□ -1.6
SRSF4-204ENST00000489898 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
SRSF4-204ENST00000489898 SEC61GP60059 68 aa5.04□□□□□ -1.6
SRSF4-204ENST00000489898 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
SRSF4-204ENST00000489898 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
SRSF4-204ENST00000489898 A0A1B0GU69 56 aa5□□□□□ -1.61
SRSF4-204ENST00000489898 PSPHP1O15172 72 aa4.99□□□□□ -1.61
SRSF4-204ENST00000489898 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
SRSF4-204ENST00000489898 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
SRSF4-204ENST00000489898 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
SRSF4-204ENST00000489898 P0C880 135 aa4.94□□□□□ -1.62
SRSF4-204ENST00000489898 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
SRSF4-204ENST00000489898 A6NED7 52 aa4.91□□□□□ -1.62
SRSF4-204ENST00000489898 H3BS24 57 aa4.91□□□□□ -1.62
SRSF4-204ENST00000489898 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
SRSF4-204ENST00000489898 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
SRSF4-204ENST00000489898 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
SRSF4-204ENST00000489898 UQCR11O14957 56 aa4.85□□□□□ -1.63
SRSF4-204ENST00000489898 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
SRSF4-204ENST00000489898 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
SRSF4-204ENST00000489898 A0A1B0GU33 70 aa4.8□□□□□ -1.64
SRSF4-204ENST00000489898 SPRR2EP22531 72 aa4.8□□□□□ -1.64
SRSF4-204ENST00000489898 SPRR2BP35325 72 aa4.8□□□□□ -1.64
SRSF4-204ENST00000489898 SPRR2AP35326 72 aa4.8□□□□□ -1.64
SRSF4-204ENST00000489898 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
SRSF4-204ENST00000489898 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
SRSF4-204ENST00000489898 M0QZ58 72 aa4.78□□□□□ -1.64
SRSF4-204ENST00000489898 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
SRSF4-204ENST00000489898 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
SRSF4-204ENST00000489898 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
SRSF4-204ENST00000489898 R4GN34 69 aa4.78□□□□□ -1.64
SRSF4-204ENST00000489898 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
SRSF4-204ENST00000489898 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
SRSF4-204ENST00000489898 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
SRSF4-204ENST00000489898 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
SRSF4-204ENST00000489898 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
SRSF4-204ENST00000489898 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
SRSF4-204ENST00000489898 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
SRSF4-204ENST00000489898 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
SRSF4-204ENST00000489898 K7ERS5 55 aa4.69□□□□□ -1.66
SRSF4-204ENST00000489898 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
SRSF4-204ENST00000489898 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
SRSF4-204ENST00000489898 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
SRSF4-204ENST00000489898 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
SRSF4-204ENST00000489898 SPRR2DP22532 72 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms