RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 NDUFS5O43920 106 aa2.59□□□□□ -1.99
SF3A3-207ENST00000488934 SPINK7P58062 85 aa2.58□□□□□ -2
SF3A3-207ENST00000488934 PRO0461Q9UI25 63 aa2.58□□□□□ -2
SF3A3-207ENST00000488934 CASC2Q6XLA1 102 aa2.57□□□□□ -2
SF3A3-207ENST00000488934 LINC00846Q9NV44 126 aa2.57□□□□□ -2
SF3A3-207ENST00000488934 HRES1P13985 223 aa2.56□□□□□ -2
SF3A3-207ENST00000488934 WFDC13Q8IUB5 93 aa2.56□□□□□ -2
SF3A3-207ENST00000488934 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
SF3A3-207ENST00000488934 HCG22E2RYF7 251 aa2.55□□□□□ -2
SF3A3-207ENST00000488934 CXCL6P80162 114 aa2.55□□□□□ -2
SF3A3-207ENST00000488934 C7orf65Q6ZTY9 151 aa2.55□□□□□ -2
SF3A3-207ENST00000488934 ACYP1P07311 99 aa2.54□□□□□ -2
SF3A3-207ENST00000488934 ETDBQ3ZM63 59 aa2.54□□□□□ -2
SF3A3-207ENST00000488934 LCE3AQ5TA76 89 aa2.54□□□□□ -2
SF3A3-207ENST00000488934 Q8N9L7 120 aa2.54□□□□□ -2
SF3A3-207ENST00000488934 ATP5EP2Q5VTU8 51 aa2.53□□□□□ -2
SF3A3-207ENST00000488934 TP53AIP1Q9HCN2 124 aa2.53□□□□□ -2
SF3A3-207ENST00000488934 FAM240AA0A1B0GVK7 77 aa2.52□□□□□ -2.01
SF3A3-207ENST00000488934 Q5W150 140 aa2.5□□□□□ -2.01
SF3A3-207ENST00000488934 H1FX-AS1Q4G0G2 97 aa2.49□□□□□ -2.01
SF3A3-207ENST00000488934 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
SF3A3-207ENST00000488934 TRAV22A0A0B4J277 110 aa2.47□□□□□ -2.01
SF3A3-207ENST00000488934 J3QR89 54 aa2.47□□□□□ -2.01
SF3A3-207ENST00000488934 HIST1H4AP62805 103 aaKnown RBP2.47□□□□□ -2.01
SF3A3-207ENST00000488934 ATOX1O00244 68 aa2.46□□□□□ -2.02
SF3A3-207ENST00000488934 MT2AP02795 61 aa2.46□□□□□ -2.02
SF3A3-207ENST00000488934 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
SF3A3-207ENST00000488934 LINC00643Q86TS7 51 aa2.46□□□□□ -2.02
SF3A3-207ENST00000488934 LOC101927531A0A1B0GV80 90 aa2.45□□□□□ -2.02
SF3A3-207ENST00000488934 C4orf26Q17RF5 130 aa2.45□□□□□ -2.02
SF3A3-207ENST00000488934 A0A1B0GV90 55 aa2.44□□□□□ -2.02
SF3A3-207ENST00000488934 UQCRQO14949 82 aa2.44□□□□□ -2.02
SF3A3-207ENST00000488934 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
SF3A3-207ENST00000488934 MT1FP04733 61 aa2.43□□□□□ -2.02
SF3A3-207ENST00000488934 C1orf64Q8NEQ6 169 aa2.43□□□□□ -2.02
SF3A3-207ENST00000488934 S4R3F8 94 aa2.43□□□□□ -2.02
SF3A3-207ENST00000488934 CYP4F30PQ9H0H9 118 aa2.42□□□□□ -2.02
SF3A3-207ENST00000488934 H0Y9P7 68 aa2.41□□□□□ -2.02
SF3A3-207ENST00000488934 MP68P56378 58 aa2.41□□□□□ -2.02
SF3A3-207ENST00000488934 CSAG1Q6PB30 78 aa2.41□□□□□ -2.02
SF3A3-207ENST00000488934 C5orf47Q569G3 176 aa2.4□□□□□ -2.03
SF3A3-207ENST00000488934 SYNE2Q8WXH0 6885 aaKnown RBP2.39□□□□□ -2.03
SF3A3-207ENST00000488934 A0A087WVE0 104 aa2.39□□□□□ -2.03
SF3A3-207ENST00000488934 FAM236AA0A1B0GUQ0 79 aa2.39□□□□□ -2.03
SF3A3-207ENST00000488934 FAM236BA0A1B0GV22 79 aa2.39□□□□□ -2.03
SF3A3-207ENST00000488934 A8MUN3 132 aa2.39□□□□□ -2.03
SF3A3-207ENST00000488934 H3BPC8 53 aa2.38□□□□□ -2.03
SF3A3-207ENST00000488934 SCGB1A1P11684 91 aa2.38□□□□□ -2.03
SF3A3-207ENST00000488934 LCA10Q71F78 164 aa2.38□□□□□ -2.03
SF3A3-207ENST00000488934 USH2AO75445 5202 aa2.38□□□□□ -2.03
SF3A3-207ENST00000488934 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
SF3A3-207ENST00000488934 K7ERU9 68 aa2.37□□□□□ -2.03
SF3A3-207ENST00000488934 LINC00208Q96KT6 92 aa2.37□□□□□ -2.03
SF3A3-207ENST00000488934 IMUPQ9GZP8 106 aa2.37□□□□□ -2.03
SF3A3-207ENST00000488934 NDUFC1O43677 76 aa2.36□□□□□ -2.03
SF3A3-207ENST00000488934 FCGBPQ9Y6R7 5405 aaPredicted RBP2.36□□□□□ -2.03
SF3A3-207ENST00000488934 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
SF3A3-207ENST00000488934 SMIM20Q8N5G0 67 aa2.35□□□□□ -2.03
SF3A3-207ENST00000488934 KLKP1Q107X0 134 aa2.34□□□□□ -2.03
SF3A3-207ENST00000488934 CRIPTQ9P021 101 aa2.34□□□□□ -2.03
SF3A3-207ENST00000488934 H0YAA0 97 aa2.33□□□□□ -2.04
SF3A3-207ENST00000488934 KRTAP19-6Q3LI70 58 aa2.32□□□□□ -2.04
SF3A3-207ENST00000488934 Q5VV11 94 aa2.31□□□□□ -2.04
SF3A3-207ENST00000488934 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
SF3A3-207ENST00000488934 C20orf197Q8N268 126 aa2.3□□□□□ -2.04
SF3A3-207ENST00000488934 DMAC1Q96GE9 116 aa2.3□□□□□ -2.04
SF3A3-207ENST00000488934 SPRR2GQ9BYE4 73 aa2.3□□□□□ -2.04
SF3A3-207ENST00000488934 MT-ATP8P03928 68 aa2.29□□□□□ -2.04
SF3A3-207ENST00000488934 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
SF3A3-207ENST00000488934 SPTSSBQ8NFR3 76 aa2.28□□□□□ -2.04
SF3A3-207ENST00000488934 NEBP20929 6669 aa2.27□□□□□ -2.05
SF3A3-207ENST00000488934 ACYP2P14621 99 aa2.27□□□□□ -2.05
SF3A3-207ENST00000488934 KRTAP19-8Q3LI54 63 aa2.27□□□□□ -2.05
SF3A3-207ENST00000488934 ADM2Q7Z4H4 148 aa2.27□□□□□ -2.05
SF3A3-207ENST00000488934 A6NN06 94 aa2.26□□□□□ -2.05
SF3A3-207ENST00000488934 R4GN34 69 aa2.25□□□□□ -2.05
SF3A3-207ENST00000488934 CHKB-CPT1BH3BT56 60 aa2.24□□□□□ -2.05
SF3A3-207ENST00000488934 MT1BP07438 61 aa2.24□□□□□ -2.05
SF3A3-207ENST00000488934 SERP2Q8N6R1 65 aa2.24□□□□□ -2.05
SF3A3-207ENST00000488934 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
SF3A3-207ENST00000488934 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
SF3A3-207ENST00000488934 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
SF3A3-207ENST00000488934 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
SF3A3-207ENST00000488934 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
SF3A3-207ENST00000488934 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
SF3A3-207ENST00000488934 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
SF3A3-207ENST00000488934 SNURFQ9Y675 71 aa2.21□□□□□ -2.06
SF3A3-207ENST00000488934 M0QZ58 72 aa2.2□□□□□ -2.06
SF3A3-207ENST00000488934 P0C880 135 aa2.19□□□□□ -2.06
SF3A3-207ENST00000488934 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
SF3A3-207ENST00000488934 COX7CP15954 63 aa2.18□□□□□ -2.06
SF3A3-207ENST00000488934 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
SF3A3-207ENST00000488934 SEC61GP60059 68 aa2.16□□□□□ -2.06
SF3A3-207ENST00000488934 LINC01554Q52M75 96 aa2.16□□□□□ -2.06
SF3A3-207ENST00000488934 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
SF3A3-207ENST00000488934 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
SF3A3-207ENST00000488934 COA5Q86WW8 74 aa2.14□□□□□ -2.07
SF3A3-207ENST00000488934 ANAPC13Q9BS18 74 aa2.13□□□□□ -2.07
SF3A3-207ENST00000488934 SERP1Q9Y6X1 66 aa2.13□□□□□ -2.07
SF3A3-207ENST00000488934 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms