RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PRR15Q8IV56 129 aa2.86□□□□□ -1.95
CDHR3-213ENST00000488386 PRO0461Q9UI25 63 aa2.86□□□□□ -1.95
CDHR3-213ENST00000488386 NDUFS5O43920 106 aa2.84□□□□□ -1.95
CDHR3-213ENST00000488386 Q8N9L7 120 aa2.84□□□□□ -1.95
CDHR3-213ENST00000488386 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
CDHR3-213ENST00000488386 TMEM254Q8TBM7 123 aa2.83□□□□□ -1.96
CDHR3-213ENST00000488386 hDV103S1A0JD37 113 aa2.82□□□□□ -1.96
CDHR3-213ENST00000488386 BPY2O14599 106 aa2.82□□□□□ -1.96
CDHR3-213ENST00000488386 Q5W150 140 aa2.82□□□□□ -1.96
CDHR3-213ENST00000488386 FAM240AA0A1B0GVK7 77 aa2.81□□□□□ -1.96
CDHR3-213ENST00000488386 PCP4L1A6NKN8 68 aa2.81□□□□□ -1.96
CDHR3-213ENST00000488386 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CDHR3-213ENST00000488386 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
CDHR3-213ENST00000488386 HCG22E2RYF7 251 aa2.79□□□□□ -1.96
CDHR3-213ENST00000488386 ACYP1P07311 99 aa2.79□□□□□ -1.96
CDHR3-213ENST00000488386 UBL5Q9BZL1 73 aa2.78□□□□□ -1.96
CDHR3-213ENST00000488386 C4orf26Q17RF5 130 aa2.77□□□□□ -1.97
CDHR3-213ENST00000488386 ETDBQ3ZM63 59 aa2.77□□□□□ -1.97
CDHR3-213ENST00000488386 H1FX-AS1Q4G0G2 97 aa2.77□□□□□ -1.97
CDHR3-213ENST00000488386 CASC2Q6XLA1 102 aa2.77□□□□□ -1.97
CDHR3-213ENST00000488386 LINC00846Q9NV44 126 aa2.77□□□□□ -1.97
CDHR3-213ENST00000488386 ATP5EP2Q5VTU8 51 aa2.76□□□□□ -1.97
CDHR3-213ENST00000488386 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
CDHR3-213ENST00000488386 C7orf65Q6ZTY9 151 aa2.76□□□□□ -1.97
CDHR3-213ENST00000488386 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
CDHR3-213ENST00000488386 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
CDHR3-213ENST00000488386 C5orf47Q569G3 176 aa2.73□□□□□ -1.97
CDHR3-213ENST00000488386 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
CDHR3-213ENST00000488386 J3QR89 54 aa2.72□□□□□ -1.97
CDHR3-213ENST00000488386 A0A1B0GV90 55 aa2.7□□□□□ -1.98
CDHR3-213ENST00000488386 LCE3AQ5TA76 89 aa2.7□□□□□ -1.98
CDHR3-213ENST00000488386 TP53AIP1Q9HCN2 124 aa2.7□□□□□ -1.98
CDHR3-213ENST00000488386 FAM236AA0A1B0GUQ0 79 aa2.69□□□□□ -1.98
CDHR3-213ENST00000488386 FAM236BA0A1B0GV22 79 aa2.69□□□□□ -1.98
CDHR3-213ENST00000488386 LCA10Q71F78 164 aa2.69□□□□□ -1.98
CDHR3-213ENST00000488386 LINC00643Q86TS7 51 aa2.69□□□□□ -1.98
CDHR3-213ENST00000488386 C1orf64Q8NEQ6 169 aa2.69□□□□□ -1.98
CDHR3-213ENST00000488386 S4R3F8 94 aa2.69□□□□□ -1.98
CDHR3-213ENST00000488386 A0A087WVE0 104 aa2.68□□□□□ -1.98
CDHR3-213ENST00000488386 K7ERU9 68 aa2.66□□□□□ -1.98
CDHR3-213ENST00000488386 IMUPQ9GZP8 106 aa2.66□□□□□ -1.98
CDHR3-213ENST00000488386 MT1BP07438 61 aa2.65□□□□□ -1.99
CDHR3-213ENST00000488386 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
CDHR3-213ENST00000488386 CSAG1Q6PB30 78 aa2.64□□□□□ -1.99
CDHR3-213ENST00000488386 CYP4F30PQ9H0H9 118 aa2.64□□□□□ -1.99
CDHR3-213ENST00000488386 ATOX1O00244 68 aa2.63□□□□□ -1.99
CDHR3-213ENST00000488386 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
CDHR3-213ENST00000488386 TRAV22A0A0B4J277 110 aa2.62□□□□□ -1.99
CDHR3-213ENST00000488386 UQCRQO14949 82 aa2.62□□□□□ -1.99
CDHR3-213ENST00000488386 HIST1H4AP62805 103 aaKnown RBP2.62□□□□□ -1.99
CDHR3-213ENST00000488386 Q5VV11 94 aa2.62□□□□□ -1.99
CDHR3-213ENST00000488386 LOC101927531A0A1B0GV80 90 aa2.61□□□□□ -1.99
CDHR3-213ENST00000488386 A6NN06 94 aa2.61□□□□□ -1.99
CDHR3-213ENST00000488386 KLKP1Q107X0 134 aa2.61□□□□□ -1.99
CDHR3-213ENST00000488386 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
CDHR3-213ENST00000488386 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
CDHR3-213ENST00000488386 H3BPC8 53 aa2.6□□□□□ -1.99
CDHR3-213ENST00000488386 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
CDHR3-213ENST00000488386 H0Y9P7 68 aa2.59□□□□□ -1.99
CDHR3-213ENST00000488386 SMIM20Q8N5G0 67 aa2.59□□□□□ -1.99
CDHR3-213ENST00000488386 MUC12Q9UKN1 5478 aa2.56□□□□□ -2
CDHR3-213ENST00000488386 A8MUN3 132 aa2.56□□□□□ -2
CDHR3-213ENST00000488386 MP68P56378 58 aa2.55□□□□□ -2
CDHR3-213ENST00000488386 LINC00208Q96KT6 92 aa2.55□□□□□ -2
CDHR3-213ENST00000488386 NDUFC1O43677 76 aa2.54□□□□□ -2
CDHR3-213ENST00000488386 ADM2Q7Z4H4 148 aa2.54□□□□□ -2
CDHR3-213ENST00000488386 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
CDHR3-213ENST00000488386 NEBP20929 6669 aa2.53□□□□□ -2
CDHR3-213ENST00000488386 MT-ATP8P03928 68 aa2.52□□□□□ -2.01
CDHR3-213ENST00000488386 SCGB1A1P11684 91 aa2.52□□□□□ -2.01
CDHR3-213ENST00000488386 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
CDHR3-213ENST00000488386 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
CDHR3-213ENST00000488386 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
CDHR3-213ENST00000488386 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
CDHR3-213ENST00000488386 KMT2DO14686 5537 aa2.51□□□□□ -2.01
CDHR3-213ENST00000488386 P0C880 135 aa2.5□□□□□ -2.01
CDHR3-213ENST00000488386 H0YAA0 97 aa2.49□□□□□ -2.01
CDHR3-213ENST00000488386 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
CDHR3-213ENST00000488386 MT1XP80297 61 aa2.48□□□□□ -2.01
CDHR3-213ENST00000488386 SEC61GP60059 68 aa2.47□□□□□ -2.01
CDHR3-213ENST00000488386 SERP2Q8N6R1 65 aa2.47□□□□□ -2.01
CDHR3-213ENST00000488386 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
CDHR3-213ENST00000488386 M0QZ58 72 aa2.46□□□□□ -2.02
CDHR3-213ENST00000488386 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
CDHR3-213ENST00000488386 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
CDHR3-213ENST00000488386 R4GN34 69 aa2.45□□□□□ -2.02
CDHR3-213ENST00000488386 CAMK2N1Q7Z7J9 78 aa2.44□□□□□ -2.02
CDHR3-213ENST00000488386 PLAC4Q8WY50 150 aa2.44□□□□□ -2.02
CDHR3-213ENST00000488386 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
CDHR3-213ENST00000488386 ACYP2P14621 99 aa2.42□□□□□ -2.02
CDHR3-213ENST00000488386 COX7CP15954 63 aa2.42□□□□□ -2.02
CDHR3-213ENST00000488386 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
CDHR3-213ENST00000488386 SPRR2EP22531 72 aa2.41□□□□□ -2.02
CDHR3-213ENST00000488386 SPRR2BP35325 72 aa2.41□□□□□ -2.02
CDHR3-213ENST00000488386 SPRR2AP35326 72 aa2.41□□□□□ -2.02
CDHR3-213ENST00000488386 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
CDHR3-213ENST00000488386 KRTAP8-1Q8IUC2 63 aa2.4□□□□□ -2.03
CDHR3-213ENST00000488386 C20orf197Q8N268 126 aa2.4□□□□□ -2.03
CDHR3-213ENST00000488386 SPTSSBQ8NFR3 76 aa2.39□□□□□ -2.03
CDHR3-213ENST00000488386 SNURFQ9Y675 71 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms