RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	KRTAP2-3	P0C7H8	128 aa		4.81	□□□□□ -1.64
HMGN1-215	ENST00000485550	KRTAP2-4	Q9BYR9	128 aa		4.81	□□□□□ -1.64
HMGN1-215	ENST00000485550	C1orf64	Q8NEQ6	169 aa		4.79	□□□□□ -1.64
HMGN1-215	ENST00000485550	UBL5	Q9BZL1	73 aa		4.79	□□□□□ -1.64
HMGN1-215	ENST00000485550		S4R3F8	94 aa		4.79	□□□□□ -1.64
HMGN1-215	ENST00000485550	KMT2D	O14686	5537 aa		4.77	□□□□□ -1.65
HMGN1-215	ENST00000485550	CSAG1	Q6PB30	78 aa		4.77	□□□□□ -1.65
HMGN1-215	ENST00000485550	LOC105371267	A0A1B0GV96	52 aa		4.76	□□□□□ -1.65
HMGN1-215	ENST00000485550	MT1B	P07438	61 aa		4.76	□□□□□ -1.65
HMGN1-215	ENST00000485550	LCE1A	Q5T7P2	110 aa		4.76	□□□□□ -1.65
HMGN1-215	ENST00000485550	LCA10	Q71F78	164 aa		4.76	□□□□□ -1.65
HMGN1-215	ENST00000485550		Q5VV11	94 aa		4.75	□□□□□ -1.65
HMGN1-215	ENST00000485550	MDN1	Q9NU22	5596 aa		4.75	□□□□□ -1.65
HMGN1-215	ENST00000485550	PRO0461	Q9UI25	63 aa		4.74	□□□□□ -1.65
HMGN1-215	ENST00000485550	SPRR2G	Q9BYE4	73 aa		4.72	□□□□□ -1.65
HMGN1-215	ENST00000485550		K7EP34	96 aa		4.71	□□□□□ -1.66
HMGN1-215	ENST00000485550	KRTAP19-8	Q3LI54	63 aa		4.71	□□□□□ -1.66
HMGN1-215	ENST00000485550	KRTAP10-5	P60370	271 aa		4.7	□□□□□ -1.66
HMGN1-215	ENST00000485550	COL5A1-AS1	Q5SY13	56 aa		4.7	□□□□□ -1.66
HMGN1-215	ENST00000485550	TP53AIP1	Q9HCN2	124 aa		4.7	□□□□□ -1.66
HMGN1-215	ENST00000485550	KLKP1	Q107X0	134 aa		4.69	□□□□□ -1.66
HMGN1-215	ENST00000485550		A0A087WVE0	104 aa		4.67	□□□□□ -1.66
HMGN1-215	ENST00000485550	SPRR2E	P22531	72 aa		4.66	□□□□□ -1.66
HMGN1-215	ENST00000485550	SPRR2B	P35325	72 aa		4.66	□□□□□ -1.66
HMGN1-215	ENST00000485550	SPRR2A	P35326	72 aa		4.66	□□□□□ -1.66
HMGN1-215	ENST00000485550	CYP4F30P	Q9H0H9	118 aa		4.66	□□□□□ -1.66
HMGN1-215	ENST00000485550	KRTAP2-2	Q9BYT5	123 aa		4.64	□□□□□ -1.67
HMGN1-215	ENST00000485550	KRTAP2-1	Q9BYU5	128 aa		4.64	□□□□□ -1.67
HMGN1-215	ENST00000485550	ETDB	Q3ZM63	59 aa		4.63	□□□□□ -1.67
HMGN1-215	ENST00000485550	GTF2H5	Q6ZYL4	71 aa		4.62	□□□□□ -1.67
HMGN1-215	ENST00000485550	SPRR2F	Q96RM1	72 aa		4.62	□□□□□ -1.67
HMGN1-215	ENST00000485550	IMUP	Q9GZP8	106 aa		4.62	□□□□□ -1.67
HMGN1-215	ENST00000485550		F8W1H4	67 aa		4.61	□□□□□ -1.67
HMGN1-215	ENST00000485550	TRAV22	A0A0B4J277	110 aa		4.6	□□□□□ -1.67
HMGN1-215	ENST00000485550	KRTAP10-7	P60409	375 aa	Predicted RBP	4.59	□□□□□ -1.67
HMGN1-215	ENST00000485550	LOC101927531	A0A1B0GV80	90 aa		4.58	□□□□□ -1.68
HMGN1-215	ENST00000485550	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.58	□□□□□ -1.68
HMGN1-215	ENST00000485550	CRIPT	Q9P021	101 aa		4.58	□□□□□ -1.68
HMGN1-215	ENST00000485550	KRTAP5-11	Q6L8G4	156 aa		4.56	□□□□□ -1.68
HMGN1-215	ENST00000485550	PCP4L1	A6NKN8	68 aa		4.55	□□□□□ -1.68
HMGN1-215	ENST00000485550	NDUFC1	O43677	76 aa		4.55	□□□□□ -1.68
HMGN1-215	ENST00000485550	HIST1H4A	P62805	103 aa	Known RBP	4.54	□□□□□ -1.68
HMGN1-215	ENST00000485550		H0Y9P7	68 aa		4.53	□□□□□ -1.68
HMGN1-215	ENST00000485550	UQCRQ	O14949	82 aa		4.52	□□□□□ -1.69
HMGN1-215	ENST00000485550	ADM2	Q7Z4H4	148 aa		4.51	□□□□□ -1.69
HMGN1-215	ENST00000485550	ACYP1	P07311	99 aa		4.5	□□□□□ -1.69
HMGN1-215	ENST00000485550	SPRR2D	P22532	72 aa		4.5	□□□□□ -1.69
HMGN1-215	ENST00000485550		H0YAA0	97 aa		4.49	□□□□□ -1.69
HMGN1-215	ENST00000485550	ATOX1	O00244	68 aa		4.49	□□□□□ -1.69
HMGN1-215	ENST00000485550		A8MUN3	132 aa		4.47	□□□□□ -1.69
HMGN1-215	ENST00000485550	ATP5EP2	Q5VTU8	51 aa		4.47	□□□□□ -1.69
HMGN1-215	ENST00000485550	KRTAP8-1	Q8IUC2	63 aa		4.46	□□□□□ -1.7
HMGN1-215	ENST00000485550	LINC00208	Q96KT6	92 aa		4.46	□□□□□ -1.7
HMGN1-215	ENST00000485550	FAM240A	A0A1B0GVK7	77 aa		4.45	□□□□□ -1.7
HMGN1-215	ENST00000485550	MT1X	P80297	61 aa		4.43	□□□□□ -1.7
HMGN1-215	ENST00000485550	PLAC4	Q8WY50	150 aa		4.43	□□□□□ -1.7
HMGN1-215	ENST00000485550	PRO2289	Q9P1D8	64 aa		4.42	□□□□□ -1.7
HMGN1-215	ENST00000485550		P0C880	135 aa		4.4	□□□□□ -1.71
HMGN1-215	ENST00000485550	LINC00643	Q86TS7	51 aa		4.4	□□□□□ -1.71
HMGN1-215	ENST00000485550	MP68	P56378	58 aa		4.39	□□□□□ -1.71
HMGN1-215	ENST00000485550		R4GN34	69 aa		4.39	□□□□□ -1.71
HMGN1-215	ENST00000485550	OCR1	Q9BZK8	76 aa		4.37	□□□□□ -1.71
HMGN1-215	ENST00000485550		M0QZ58	72 aa		4.36	□□□□□ -1.71
HMGN1-215	ENST00000485550	GPR98	Q8WXG9	6306 aa		4.35	□□□□□ -1.71
HMGN1-215	ENST00000485550	LINC01554	Q52M75	96 aa		4.35	□□□□□ -1.71
HMGN1-215	ENST00000485550	C20orf197	Q8N268	126 aa		4.32	□□□□□ -1.72
HMGN1-215	ENST00000485550	KRTAP12-2	P59991	146 aa		4.31	□□□□□ -1.72
HMGN1-215	ENST00000485550	DMAC1	Q96GE9	116 aa		4.3	□□□□□ -1.72
HMGN1-215	ENST00000485550		H3BPC8	53 aa		4.28	□□□□□ -1.72
HMGN1-215	ENST00000485550	LCE1E	Q5T753	118 aa		4.28	□□□□□ -1.72
HMGN1-215	ENST00000485550	SCGB1A1	P11684	91 aa		4.27	□□□□□ -1.73
HMGN1-215	ENST00000485550		A0A1B0GV90	55 aa		4.26	□□□□□ -1.73
HMGN1-215	ENST00000485550	DST	Q03001	7570 aa	Known RBP	4.21	□□□□□ -1.74
HMGN1-215	ENST00000485550	MT-ATP8	P03928	68 aa		4.2	□□□□□ -1.74
HMGN1-215	ENST00000485550	TRAV7	A0A075B6U4	112 aa		4.19	□□□□□ -1.74
HMGN1-215	ENST00000485550	ACYP2	P14621	99 aa		4.19	□□□□□ -1.74
HMGN1-215	ENST00000485550	KRTAP10-12	P60413	245 aa		4.19	□□□□□ -1.74
HMGN1-215	ENST00000485550		J3QR89	54 aa		4.18	□□□□□ -1.74
HMGN1-215	ENST00000485550	SVIP	Q8NHG7	77 aa		4.16	□□□□□ -1.74
HMGN1-215	ENST00000485550	PCP4	P48539	62 aa		4.15	□□□□□ -1.75
HMGN1-215	ENST00000485550	MT3	P25713	68 aa		4.14	□□□□□ -1.75
HMGN1-215	ENST00000485550	SPTSSB	Q8NFR3	76 aa		4.14	□□□□□ -1.75
HMGN1-215	ENST00000485550	CHKB-CPT1B	H3BT56	60 aa		4.13	□□□□□ -1.75
HMGN1-215	ENST00000485550		A0A0A0MQY5	61 aa		4.08	□□□□□ -1.76
HMGN1-215	ENST00000485550	SNURF	Q9Y675	71 aa		4.08	□□□□□ -1.76
HMGN1-215	ENST00000485550	KRTAP13-4	Q3LI77	160 aa		4.06	□□□□□ -1.76
HMGN1-215	ENST00000485550	SMIM20	Q8N5G0	67 aa		4.06	□□□□□ -1.76
HMGN1-215	ENST00000485550	CAMK2N1	Q7Z7J9	78 aa		4.03	□□□□□ -1.76
HMGN1-215	ENST00000485550	MT4	P47944	62 aa		4	□□□□□ -1.77
HMGN1-215	ENST00000485550	KRTAP5-1	Q6L8H4	278 aa		3.99	□□□□□ -1.77
HMGN1-215	ENST00000485550	KRTAP5-10	Q6L8G5	202 aa		3.98	□□□□□ -1.77
HMGN1-215	ENST00000485550		K7ERU9	68 aa		3.97	□□□□□ -1.77
HMGN1-215	ENST00000485550	SPANXA2-OT1	Q8N9U9	137 aa		3.97	□□□□□ -1.77
HMGN1-215	ENST00000485550		A0A0D9SG42	100 aa		3.96	□□□□□ -1.78
HMGN1-215	ENST00000485550	KRTAP19-7	Q3SYF9	63 aa		3.96	□□□□□ -1.78
HMGN1-215	ENST00000485550	MT1E	P04732	61 aa		3.94	□□□□□ -1.78
HMGN1-215	ENST00000485550	HMCN1	Q96RW7	5635 aa		3.93	□□□□□ -1.78
HMGN1-215	ENST00000485550	KRTAP19-3	Q7Z4W3	81 aa		3.92	□□□□□ -1.78
HMGN1-215	ENST00000485550	COA5	Q86WW8	74 aa		3.91	□□□□□ -1.78
HMGN1-215	ENST00000485550	AHNAK2	Q8IVF2	5795 aa		3.91	□□□□□ -1.78

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