RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
DDX56-212ENST00000485367 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
DDX56-212ENST00000485367 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
DDX56-212ENST00000485367 MUC2Q02817 5179 aa6.02□□□□□ -1.45
DDX56-212ENST00000485367 SPINK1P00995 79 aa6.01□□□□□ -1.45
DDX56-212ENST00000485367 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
DDX56-212ENST00000485367 Q5W150 140 aa6.01□□□□□ -1.45
DDX56-212ENST00000485367 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
DDX56-212ENST00000485367 A0A1B0GU69 56 aa6□□□□□ -1.45
DDX56-212ENST00000485367 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
DDX56-212ENST00000485367 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
DDX56-212ENST00000485367 UQCR11O14957 56 aa5.96□□□□□ -1.46
DDX56-212ENST00000485367 RPS29P62273 56 aaKnown RBP5.95□□□□□ -1.46
DDX56-212ENST00000485367 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
DDX56-212ENST00000485367 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
DDX56-212ENST00000485367 ROMO1P60602 79 aa5.89□□□□□ -1.47
DDX56-212ENST00000485367 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
DDX56-212ENST00000485367 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
DDX56-212ENST00000485367 IGKV2D-30A0A075B6S6 120 aa5.83□□□□□ -1.48
DDX56-212ENST00000485367 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
DDX56-212ENST00000485367 XP32Q5T750 250 aa5.83□□□□□ -1.48
DDX56-212ENST00000485367 LCE2AQ5TA79 106 aaPredicted RBP5.83□□□□□ -1.48
DDX56-212ENST00000485367 KRTAP16-1A8MUX0 517 aa5.82□□□□□ -1.48
DDX56-212ENST00000485367 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
DDX56-212ENST00000485367 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
DDX56-212ENST00000485367 A8MUU9 505 aa5.73□□□□□ -1.49
DDX56-212ENST00000485367 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
DDX56-212ENST00000485367 P0C880 135 aa5.67□□□□□ -1.5
DDX56-212ENST00000485367 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
DDX56-212ENST00000485367 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
DDX56-212ENST00000485367 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
DDX56-212ENST00000485367 H0YAA0 97 aa5.62□□□□□ -1.51
DDX56-212ENST00000485367 A0A1B0GU33 70 aa5.6□□□□□ -1.51
DDX56-212ENST00000485367 MT1HP80294 61 aa5.59□□□□□ -1.51
DDX56-212ENST00000485367 H1FX-AS1Q4G0G2 97 aa5.58□□□□□ -1.52
DDX56-212ENST00000485367 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
DDX56-212ENST00000485367 K7ERS5 55 aa5.57□□□□□ -1.52
DDX56-212ENST00000485367 COX6B2Q6YFQ2 88 aa5.56□□□□□ -1.52
DDX56-212ENST00000485367 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
DDX56-212ENST00000485367 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
DDX56-212ENST00000485367 M0R2T5 61 aa5.52□□□□□ -1.53
DDX56-212ENST00000485367 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
DDX56-212ENST00000485367 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
DDX56-212ENST00000485367 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
DDX56-212ENST00000485367 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
DDX56-212ENST00000485367 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
DDX56-212ENST00000485367 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
DDX56-212ENST00000485367 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
DDX56-212ENST00000485367 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
DDX56-212ENST00000485367 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
DDX56-212ENST00000485367 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
DDX56-212ENST00000485367 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
DDX56-212ENST00000485367 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
DDX56-212ENST00000485367 CRIPTQ9P021 101 aa5.33□□□□□ -1.56
DDX56-212ENST00000485367 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
DDX56-212ENST00000485367 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
DDX56-212ENST00000485367 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
DDX56-212ENST00000485367 MT2AP02795 61 aa5.21□□□□□ -1.57
DDX56-212ENST00000485367 S4R3F8 94 aa5.21□□□□□ -1.58
DDX56-212ENST00000485367 A0A0D9SG42 100 aa5.19□□□□□ -1.58
DDX56-212ENST00000485367 USH2AO75445 5202 aa5.18□□□□□ -1.58
DDX56-212ENST00000485367 MT1FP04733 61 aa5.17□□□□□ -1.58
DDX56-212ENST00000485367 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
DDX56-212ENST00000485367 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
DDX56-212ENST00000485367 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
DDX56-212ENST00000485367 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
DDX56-212ENST00000485367 LCE2BO14633 110 aa5.1□□□□□ -1.59
DDX56-212ENST00000485367 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
DDX56-212ENST00000485367 M0QZ58 72 aa5.09□□□□□ -1.59
DDX56-212ENST00000485367 KRTAP12-1P59990 96 aa5.09□□□□□ -1.6
DDX56-212ENST00000485367 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
DDX56-212ENST00000485367 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
DDX56-212ENST00000485367 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
DDX56-212ENST00000485367 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
DDX56-212ENST00000485367 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
DDX56-212ENST00000485367 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
DDX56-212ENST00000485367 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
DDX56-212ENST00000485367 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
DDX56-212ENST00000485367 R4GN34 69 aa4.83□□□□□ -1.64
DDX56-212ENST00000485367 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
DDX56-212ENST00000485367 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
DDX56-212ENST00000485367 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
DDX56-212ENST00000485367 MT1BP07438 61 aa4.73□□□□□ -1.65
DDX56-212ENST00000485367 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
DDX56-212ENST00000485367 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
DDX56-212ENST00000485367 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
DDX56-212ENST00000485367 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
DDX56-212ENST00000485367 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
DDX56-212ENST00000485367 NEBP20929 6669 aa4.62□□□□□ -1.67
DDX56-212ENST00000485367 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
DDX56-212ENST00000485367 INE1O15225 51 aa4.54□□□□□ -1.68
DDX56-212ENST00000485367 TNP1P09430 55 aa4.52□□□□□ -1.69
DDX56-212ENST00000485367 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
DDX56-212ENST00000485367 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
DDX56-212ENST00000485367 MT1XP80297 61 aa4.43□□□□□ -1.7
DDX56-212ENST00000485367 KMT2DO14686 5537 aa4.42□□□□□ -1.7
DDX56-212ENST00000485367 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
DDX56-212ENST00000485367 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
DDX56-212ENST00000485367 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
DDX56-212ENST00000485367 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms