RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 Q96NJ1 140 aa4.76□□□□□ -1.65
CDK13-205ENST00000484589 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
CDK13-205ENST00000484589 RNF213Q63HN8 5207 aa4.76□□□□□ -1.65
CDK13-205ENST00000484589 MUC2Q02817 5179 aa4.75□□□□□ -1.65
CDK13-205ENST00000484589 LINC00472Q9H8W2 130 aa4.73□□□□□ -1.65
CDK13-205ENST00000484589 LINC00846Q9NV44 126 aa4.72□□□□□ -1.65
CDK13-205ENST00000484589 XP32Q5T750 250 aa4.71□□□□□ -1.66
CDK13-205ENST00000484589 SPANXA2-OT1Q8N9U9 137 aa4.7□□□□□ -1.66
CDK13-205ENST00000484589 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
CDK13-205ENST00000484589 IGKV4-1P06312 121 aa4.69□□□□□ -1.66
CDK13-205ENST00000484589 KRTAP13-3Q3SY46 172 aa4.69□□□□□ -1.66
CDK13-205ENST00000484589 NREPQ16612 68 aa4.69□□□□□ -1.66
CDK13-205ENST00000484589 TPRXLQ17RH7 258 aa4.66□□□□□ -1.66
CDK13-205ENST00000484589 DSCR10P59022 87 aa4.65□□□□□ -1.67
CDK13-205ENST00000484589 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
CDK13-205ENST00000484589 Q8N9L7 120 aa4.64□□□□□ -1.67
CDK13-205ENST00000484589 UBL5Q9BZL1 73 aa4.63□□□□□ -1.67
CDK13-205ENST00000484589 K7EQZ3 153 aa4.63□□□□□ -1.67
CDK13-205ENST00000484589 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
CDK13-205ENST00000484589 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
CDK13-205ENST00000484589 A0A1B0GU33 70 aa4.61□□□□□ -1.67
CDK13-205ENST00000484589 MUC17Q685J3 4493 aa4.61□□□□□ -1.67
CDK13-205ENST00000484589 Q5W150 140 aa4.58□□□□□ -1.68
CDK13-205ENST00000484589 NDUFB1O75438 58 aa4.58□□□□□ -1.68
CDK13-205ENST00000484589 SPINK7P58062 85 aa4.57□□□□□ -1.68
CDK13-205ENST00000484589 MMP24-AS1A0A0U1RRL7 71 aa4.56□□□□□ -1.68
CDK13-205ENST00000484589 LINC00208Q96KT6 92 aa4.56□□□□□ -1.68
CDK13-205ENST00000484589 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
CDK13-205ENST00000484589 RPL37P61927 97 aaKnown RBP4.54□□□□□ -1.68
CDK13-205ENST00000484589 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
CDK13-205ENST00000484589 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
CDK13-205ENST00000484589 FAT4Q6V0I7 4981 aa4.53□□□□□ -1.68
CDK13-205ENST00000484589 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
CDK13-205ENST00000484589 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
CDK13-205ENST00000484589 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
CDK13-205ENST00000484589 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
CDK13-205ENST00000484589 H0Y9P7 68 aa4.49□□□□□ -1.69
CDK13-205ENST00000484589 UQCR11O14957 56 aa4.48□□□□□ -1.69
CDK13-205ENST00000484589 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.69
CDK13-205ENST00000484589 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
CDK13-205ENST00000484589 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
CDK13-205ENST00000484589 R4GN34 69 aa4.39□□□□□ -1.71
CDK13-205ENST00000484589 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
CDK13-205ENST00000484589 KRTAP19-2Q3LHN2 52 aa4.37□□□□□ -1.71
CDK13-205ENST00000484589 COA5Q86WW8 74 aa4.36□□□□□ -1.71
CDK13-205ENST00000484589 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
CDK13-205ENST00000484589 IGKV2D-30A0A075B6S6 120 aa4.35□□□□□ -1.71
CDK13-205ENST00000484589 IGKV2-30P06310 120 aa4.35□□□□□ -1.71
CDK13-205ENST00000484589 HRES1P13985 223 aa4.34□□□□□ -1.71
CDK13-205ENST00000484589 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
CDK13-205ENST00000484589 A0A1B0GU69 56 aa4.25□□□□□ -1.73
CDK13-205ENST00000484589 MT1HP80294 61 aa4.24□□□□□ -1.73
CDK13-205ENST00000484589 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
CDK13-205ENST00000484589 ACYP2P14621 99 aa4.16□□□□□ -1.74
CDK13-205ENST00000484589 M0R2T5 61 aa4.16□□□□□ -1.74
CDK13-205ENST00000484589 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
CDK13-205ENST00000484589 KRTAP10-6P60371 365 aaPredicted RBP4.11□□□□□ -1.75
CDK13-205ENST00000484589 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
CDK13-205ENST00000484589 S4R3F8 94 aa4.08□□□□□ -1.76
CDK13-205ENST00000484589 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
CDK13-205ENST00000484589 INE1O15225 51 aa4.02□□□□□ -1.77
CDK13-205ENST00000484589 MT2AP02795 61 aa4.02□□□□□ -1.77
CDK13-205ENST00000484589 MT1FP04733 61 aa4.01□□□□□ -1.77
CDK13-205ENST00000484589 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
CDK13-205ENST00000484589 USH2AO75445 5202 aa3.99□□□□□ -1.77
CDK13-205ENST00000484589 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
CDK13-205ENST00000484589 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
CDK13-205ENST00000484589 CRIPTQ9P021 101 aa3.94□□□□□ -1.78
CDK13-205ENST00000484589 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
CDK13-205ENST00000484589 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
CDK13-205ENST00000484589 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
CDK13-205ENST00000484589 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
CDK13-205ENST00000484589 H0YAA0 97 aa3.88□□□□□ -1.79
CDK13-205ENST00000484589 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
CDK13-205ENST00000484589 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
CDK13-205ENST00000484589 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
CDK13-205ENST00000484589 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
CDK13-205ENST00000484589 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
CDK13-205ENST00000484589 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
CDK13-205ENST00000484589 M0QZ58 72 aa3.75□□□□□ -1.81
CDK13-205ENST00000484589 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
CDK13-205ENST00000484589 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
CDK13-205ENST00000484589 MT1BP07438 61 aa3.74□□□□□ -1.81
CDK13-205ENST00000484589 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
CDK13-205ENST00000484589 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
CDK13-205ENST00000484589 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
CDK13-205ENST00000484589 PP632Q6XCG6 107 aa3.71□□□□□ -1.81
CDK13-205ENST00000484589 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.82
CDK13-205ENST00000484589 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
CDK13-205ENST00000484589 LCE5AQ5TCM9 118 aa3.66□□□□□ -1.82
CDK13-205ENST00000484589 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.82
CDK13-205ENST00000484589 A0A0D9SG42 100 aa3.64□□□□□ -1.83
CDK13-205ENST00000484589 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
CDK13-205ENST00000484589 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
CDK13-205ENST00000484589 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
CDK13-205ENST00000484589 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
CDK13-205ENST00000484589 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
CDK13-205ENST00000484589 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
CDK13-205ENST00000484589 KMT2DO14686 5537 aa3.59□□□□□ -1.83
CDK13-205ENST00000484589 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms