RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
USP11-207ENST00000478596 HRES1P13985 223 aa7.29□□□□□ -1.24
USP11-207ENST00000478596 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
USP11-207ENST00000478596 C1orf64Q8NEQ6 169 aa7.29□□□□□ -1.24
USP11-207ENST00000478596 H3BPC8 53 aa7.25□□□□□ -1.25
USP11-207ENST00000478596 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
USP11-207ENST00000478596 CYP4F30PQ9H0H9 118 aa7.23□□□□□ -1.25
USP11-207ENST00000478596 SERP2Q8N6R1 65 aa7.22□□□□□ -1.25
USP11-207ENST00000478596 C4orf26Q17RF5 130 aa7.21□□□□□ -1.26
USP11-207ENST00000478596 MPLKIPQ8TAP9 179 aa7.18□□□□□ -1.26
USP11-207ENST00000478596 ANAPC13Q9BS18 74 aa7.18□□□□□ -1.26
USP11-207ENST00000478596 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
USP11-207ENST00000478596 SNURFQ9Y675 71 aa7.15□□□□□ -1.26
USP11-207ENST00000478596 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
USP11-207ENST00000478596 COX7CP15954 63 aa7.12□□□□□ -1.27
USP11-207ENST00000478596 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
USP11-207ENST00000478596 A8MUN3 132 aa7.02□□□□□ -1.29
USP11-207ENST00000478596 S4R3F8 94 aa7.02□□□□□ -1.29
USP11-207ENST00000478596 MDN1Q9NU22 5596 aa7.01□□□□□ -1.29
USP11-207ENST00000478596 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
USP11-207ENST00000478596 NDUFC1O43677 76 aa6.97□□□□□ -1.29
USP11-207ENST00000478596 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
USP11-207ENST00000478596 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
USP11-207ENST00000478596 KMT2DO14686 5537 aa6.97□□□□□ -1.29
USP11-207ENST00000478596 CCDC179H3BU77 68 aa6.95□□□□□ -1.3
USP11-207ENST00000478596 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
USP11-207ENST00000478596 LCA10Q71F78 164 aa6.92□□□□□ -1.3
USP11-207ENST00000478596 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
USP11-207ENST00000478596 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
USP11-207ENST00000478596 ACYP2P14621 99 aa6.9□□□□□ -1.3
USP11-207ENST00000478596 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
USP11-207ENST00000478596 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
USP11-207ENST00000478596 H7BZZ5 65 aa6.88□□□□□ -1.31
USP11-207ENST00000478596 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
USP11-207ENST00000478596 SPTSSBQ8NFR3 76 aa6.81□□□□□ -1.32
USP11-207ENST00000478596 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
USP11-207ENST00000478596 TMEM258P61165 79 aa6.76□□□□□ -1.33
USP11-207ENST00000478596 COA5Q86WW8 74 aa6.76□□□□□ -1.33
USP11-207ENST00000478596 KRTAP3-3Q9BYR6 98 aa6.76□□□□□ -1.33
USP11-207ENST00000478596 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
USP11-207ENST00000478596 A6NN06 94 aa6.74□□□□□ -1.33
USP11-207ENST00000478596 PCP4P48539 62 aa6.74□□□□□ -1.33
USP11-207ENST00000478596 KRTAP2-2Q9BYT5 123 aa6.71□□□□□ -1.34
USP11-207ENST00000478596 KRTAP2-1Q9BYU5 128 aa6.71□□□□□ -1.34
USP11-207ENST00000478596 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
USP11-207ENST00000478596 H0YAA0 97 aa6.61□□□□□ -1.35
USP11-207ENST00000478596 SPRR2EP22531 72 aa6.55□□□□□ -1.36
USP11-207ENST00000478596 SPRR2BP35325 72 aa6.55□□□□□ -1.36
USP11-207ENST00000478596 SPRR2AP35326 72 aa6.55□□□□□ -1.36
USP11-207ENST00000478596 SEC61GP60059 68 aa6.55□□□□□ -1.36
USP11-207ENST00000478596 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
USP11-207ENST00000478596 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
USP11-207ENST00000478596 MT1BP07438 61 aa6.52□□□□□ -1.37
USP11-207ENST00000478596 P0C880 135 aa6.49□□□□□ -1.37
USP11-207ENST00000478596 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
USP11-207ENST00000478596 SPRR2FQ96RM1 72 aa6.47□□□□□ -1.37
USP11-207ENST00000478596 R4GN34 69 aa6.47□□□□□ -1.37
USP11-207ENST00000478596 A0A1B0GU69 56 aa6.44□□□□□ -1.38
USP11-207ENST00000478596 M0QZ58 72 aa6.44□□□□□ -1.38
USP11-207ENST00000478596 Q5VV11 94 aa6.44□□□□□ -1.38
USP11-207ENST00000478596 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
USP11-207ENST00000478596 PRR15LQ9BU68 103 aa6.42□□□□□ -1.38
USP11-207ENST00000478596 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.38
USP11-207ENST00000478596 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
USP11-207ENST00000478596 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
USP11-207ENST00000478596 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
USP11-207ENST00000478596 SPRR2DP22532 72 aa6.35□□□□□ -1.39
USP11-207ENST00000478596 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
USP11-207ENST00000478596 A0A1B0GU33 70 aa6.31□□□□□ -1.4
USP11-207ENST00000478596 V9GYY9 64 aa6.31□□□□□ -1.4
USP11-207ENST00000478596 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
USP11-207ENST00000478596 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
USP11-207ENST00000478596 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
USP11-207ENST00000478596 PSPHP1O15172 72 aa6.22□□□□□ -1.41
USP11-207ENST00000478596 Q1T7F1 81 aa6.22□□□□□ -1.41
USP11-207ENST00000478596 KRTAP13-4Q3LI77 160 aa6.22□□□□□ -1.41
USP11-207ENST00000478596 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
USP11-207ENST00000478596 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
USP11-207ENST00000478596 A0A0D9SG42 100 aa6.21□□□□□ -1.42
USP11-207ENST00000478596 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
USP11-207ENST00000478596 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.42
USP11-207ENST00000478596 UQCR11O14957 56 aa6.15□□□□□ -1.42
USP11-207ENST00000478596 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
USP11-207ENST00000478596 A6NED7 52 aa6.08□□□□□ -1.44
USP11-207ENST00000478596 A8MU10 97 aa6.08□□□□□ -1.44
USP11-207ENST00000478596 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
USP11-207ENST00000478596 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
USP11-207ENST00000478596 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
USP11-207ENST00000478596 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
USP11-207ENST00000478596 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
USP11-207ENST00000478596 KRTAP12-2P59991 146 aa5.96□□□□□ -1.46
USP11-207ENST00000478596 K7ERS5 55 aa5.95□□□□□ -1.46
USP11-207ENST00000478596 MT1XP80297 61 aa5.92□□□□□ -1.46
USP11-207ENST00000478596 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
USP11-207ENST00000478596 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
USP11-207ENST00000478596 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
USP11-207ENST00000478596 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
USP11-207ENST00000478596 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
USP11-207ENST00000478596 AHNAK2Q8IVF2 5795 aa5.82□□□□□ -1.48
USP11-207ENST00000478596 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms