RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ARMS2P0C7Q2 107 aa-0.87□□□□□ -2.55
CLK1-209ENST00000472679 SNCAP37840 140 aa-0.87□□□□□ -2.55
CLK1-209ENST00000472679 COPZ1P61923 177 aa-0.87□□□□□ -2.55
CLK1-209ENST00000472679 BAGE3Q86Y29 109 aa-0.87□□□□□ -2.55
CLK1-209ENST00000472679 CTAGE3PQ8IX95 158 aa-0.87□□□□□ -2.55
CLK1-209ENST00000472679 LENEPQ9Y5L5 61 aa-0.87□□□□□ -2.55
CLK1-209ENST00000472679 I3L3M4 83 aa-0.88□□□□□ -2.55
CLK1-209ENST00000472679 BAGE2Q86Y30 109 aa-0.88□□□□□ -2.55
CLK1-209ENST00000472679 Q8N8P6 123 aa-0.88□□□□□ -2.55
CLK1-209ENST00000472679 MGST2Q99735 147 aa-0.88□□□□□ -2.55
CLK1-209ENST00000472679 NMES1Q9C002 83 aa-0.88□□□□□ -2.55
CLK1-209ENST00000472679 SPANXA1Q9NS26 97 aa-0.88□□□□□ -2.55
CLK1-209ENST00000472679 H3BVH4 76 aa-0.89□□□□□ -2.55
CLK1-209ENST00000472679 IL5P05113 134 aa-0.89□□□□□ -2.55
CLK1-209ENST00000472679 FCER1GP30273 86 aa-0.89□□□□□ -2.55
CLK1-209ENST00000472679 RBP2P50120 134 aa-0.89□□□□□ -2.55
CLK1-209ENST00000472679 RRAS2P62070 204 aaPredicted RBP-0.89□□□□□ -2.55
CLK1-209ENST00000472679 DPY30Q9C005 99 aa-0.89□□□□□ -2.55
CLK1-209ENST00000472679 TMEM191AQ9H0A3 160 aa-0.89□□□□□ -2.55
CLK1-209ENST00000472679 A0A087WXM4 84 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 LOC285095A0A1B0GVY8 99 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 F6UZH7 168 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 H3BQ15 152 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 UBE2G1P62253 170 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 SEC11AP67812 179 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 HMGN3Q15651 99 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 SPANXN1Q5VSR9 72 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 RERGLQ9H628 205 aa-0.9□□□□□ -2.55
CLK1-209ENST00000472679 CHKB-CPT1BH3BT56 60 aa-0.91□□□□□ -2.56
CLK1-209ENST00000472679 IGLC2P0DOY2 106 aa-0.91□□□□□ -2.56
CLK1-209ENST00000472679 HIST1H1DP16402 221 aaKnown RBP-0.91□□□□□ -2.56
CLK1-209ENST00000472679 SMCO1Q147U7 214 aa-0.91□□□□□ -2.56
CLK1-209ENST00000472679 RPL7L1Q6DKI1 246 aaKnown RBP-0.91□□□□□ -2.56
CLK1-209ENST00000472679 SFTA2Q6UW10 78 aa-0.91□□□□□ -2.56
CLK1-209ENST00000472679 TSC22D3Q99576 134 aa-0.91□□□□□ -2.56
CLK1-209ENST00000472679 C2orf88Q9BSF0 95 aa-0.91□□□□□ -2.56
CLK1-209ENST00000472679 TPT1P8Q9HAU6 139 aa-0.91□□□□□ -2.56
CLK1-209ENST00000472679 A0A1B0GWA3 101 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 A6NIN4 97 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 LINC00587B1AMM8 73 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 ARPC5O15511 151 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 SMIM13P0DJ93 91 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 C10orf113Q5VZT2 155 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 NCBP2-AS2Q69YL0 99 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 C12orf57Q99622 126 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 ST20Q9HBF5 79 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 PSENENQ9NZ42 101 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 V9GYS6 101 aa-0.92□□□□□ -2.56
CLK1-209ENST00000472679 IFI27P40305 119 aaPredicted RBP-0.93□□□□□ -2.56
CLK1-209ENST00000472679 RPL39P62891 51 aaKnown RBP-0.93□□□□□ -2.56
CLK1-209ENST00000472679 MEIG1Q5JSS6 88 aa-0.93□□□□□ -2.56
CLK1-209ENST00000472679 ZNF720Q7Z2F6 126 aa-0.93□□□□□ -2.56
CLK1-209ENST00000472679 RPL39LQ96EH5 51 aaKnown RBP-0.93□□□□□ -2.56
CLK1-209ENST00000472679 FAM167A-AS1Q96KT0 104 aa-0.93□□□□□ -2.56
CLK1-209ENST00000472679 PDCD10Q9BUL8 212 aa-0.93□□□□□ -2.56
CLK1-209ENST00000472679 SAR1AQ9NR31 198 aa-0.93□□□□□ -2.56
CLK1-209ENST00000472679 TMEM218A2RU14 115 aa-0.94□□□□□ -2.56
CLK1-209ENST00000472679 ATOX1O00244 68 aa-0.94□□□□□ -2.56
CLK1-209ENST00000472679 MRPL54Q6P161 138 aaKnown RBP-0.94□□□□□ -2.56
CLK1-209ENST00000472679 ACBD7Q8N6N7 88 aa-0.94□□□□□ -2.56
CLK1-209ENST00000472679 S100A13Q99584 98 aa-0.94□□□□□ -2.56
CLK1-209ENST00000472679 C20orf78Q9BR46 151 aa-0.94□□□□□ -2.56
CLK1-209ENST00000472679 SPANXDQ9BXN6 97 aa-0.94□□□□□ -2.56
CLK1-209ENST00000472679 CACFD1Q9UGQ2 172 aa-0.94□□□□□ -2.56
CLK1-209ENST00000472679 LEPROTL1O95214 131 aa-0.95□□□□□ -2.56
CLK1-209ENST00000472679 ARPC4P59998 168 aa-0.95□□□□□ -2.56
CLK1-209ENST00000472679 CATR1Q13166 79 aa-0.95□□□□□ -2.56
CLK1-209ENST00000472679 NREPQ16612 68 aa-0.95□□□□□ -2.56
CLK1-209ENST00000472679 PFDN5Q99471 154 aa-0.95□□□□□ -2.56
CLK1-209ENST00000472679 SEC11CQ9BY50 192 aa-0.95□□□□□ -2.56
CLK1-209ENST00000472679 AP4S1Q9Y587 144 aa-0.95□□□□□ -2.56
CLK1-209ENST00000472679 CEBPZOSA8MTT3 80 aa-0.96□□□□□ -2.56
CLK1-209ENST00000472679 MIF4GDA9UHW6 222 aaKnown RBP-0.96□□□□□ -2.56
CLK1-209ENST00000472679 H0Y9P7 68 aa-0.96□□□□□ -2.56
CLK1-209ENST00000472679 SNCGO76070 127 aa-0.96□□□□□ -2.56
CLK1-209ENST00000472679 SNRPFP62306 86 aaKnown RBP-0.96□□□□□ -2.56
CLK1-209ENST00000472679 GSKIPQ9P0R6 139 aa-0.96□□□□□ -2.56
CLK1-209ENST00000472679 IER3IP1Q9Y5U9 82 aa-0.96□□□□□ -2.56
CLK1-209ENST00000472679 A0A1B0GU69 56 aa-0.97□□□□□ -2.56
CLK1-209ENST00000472679 SFT2D2O95562 160 aa-0.97□□□□□ -2.56
CLK1-209ENST00000472679 RPL38P63173 70 aaKnown RBP-0.97□□□□□ -2.56
CLK1-209ENST00000472679 LINC00308Q8TCZ7 52 aa-0.97□□□□□ -2.56
CLK1-209ENST00000472679 S100ZQ8WXG8 99 aa-0.97□□□□□ -2.56
CLK1-209ENST00000472679 LZICQ8WZA0 190 aa-0.97□□□□□ -2.56
CLK1-209ENST00000472679 TMEM167BQ9NRX6 74 aa-0.97□□□□□ -2.56
CLK1-209ENST00000472679 MYMXA0A1B0GTQ4 84 aa-0.98□□□□□ -2.57
CLK1-209ENST00000472679 R4GMQ9 66 aa-0.98□□□□□ -2.57
CLK1-209ENST00000472679 IGIPA6NJ69 53 aa-0.99□□□□□ -2.57
CLK1-209ENST00000472679 SELENOWP63302 87 aa-0.99□□□□□ -2.57
CLK1-209ENST00000472679 SMIM3Q9BZL3 60 aa-0.99□□□□□ -2.57
CLK1-209ENST00000472679 PAIP2BQ9ULR5 123 aaKnown RBP-0.99□□□□□ -2.57
CLK1-209ENST00000472679 IGLC3P0DOY3 106 aa-1□□□□□ -2.57
CLK1-209ENST00000472679 TMEM170BQ5T4T1 132 aa-1□□□□□ -2.57
CLK1-209ENST00000472679 RPL13AP3Q6NVV1 102 aa-1□□□□□ -2.57
CLK1-209ENST00000472679 UQCR11O14957 56 aa-1.01□□□□□ -2.57
CLK1-209ENST00000472679 RPS25P62851 125 aaKnown RBP-1.01□□□□□ -2.57
CLK1-209ENST00000472679 ANP32BQ92688 251 aaKnown RBP-1.01□□□□□ -2.57
CLK1-209ENST00000472679 SMIM6P0DI80 62 aa-1.02□□□□□ -2.57
CLK1-209ENST00000472679 PPP3R1P63098 170 aa-1.02□□□□□ -2.57
CLK1-209ENST00000472679 SMIM4Q8WVI0 70 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms