RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
SNRPD3-205ENST00000468770 TMEM258P61165 79 aa3.41□□□□□ -1.86
SNRPD3-205ENST00000468770 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
SNRPD3-205ENST00000468770 A0A087WVE0 104 aa3.4□□□□□ -1.87
SNRPD3-205ENST00000468770 SEC61GP60059 68 aa3.4□□□□□ -1.87
SNRPD3-205ENST00000468770 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
SNRPD3-205ENST00000468770 V9GYY9 64 aa3.4□□□□□ -1.87
SNRPD3-205ENST00000468770 TRAV7A0A075B6U4 112 aa3.39□□□□□ -1.87
SNRPD3-205ENST00000468770 C4orf26Q17RF5 130 aa3.39□□□□□ -1.87
SNRPD3-205ENST00000468770 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
SNRPD3-205ENST00000468770 NDUFC1O43677 76 aa3.37□□□□□ -1.87
SNRPD3-205ENST00000468770 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
SNRPD3-205ENST00000468770 C20orf197Q8N268 126 aa3.35□□□□□ -1.87
SNRPD3-205ENST00000468770 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
SNRPD3-205ENST00000468770 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
SNRPD3-205ENST00000468770 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
SNRPD3-205ENST00000468770 C1orf64Q8NEQ6 169 aa3.33□□□□□ -1.88
SNRPD3-205ENST00000468770 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
SNRPD3-205ENST00000468770 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
SNRPD3-205ENST00000468770 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
SNRPD3-205ENST00000468770 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
SNRPD3-205ENST00000468770 S4R3F8 94 aa3.32□□□□□ -1.88
SNRPD3-205ENST00000468770 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
SNRPD3-205ENST00000468770 SERP1Q9Y6X1 66 aa3.31□□□□□ -1.88
SNRPD3-205ENST00000468770 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
SNRPD3-205ENST00000468770 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
SNRPD3-205ENST00000468770 MP68P56378 58 aa3.3□□□□□ -1.88
SNRPD3-205ENST00000468770 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
SNRPD3-205ENST00000468770 LCA10Q71F78 164 aa3.29□□□□□ -1.88
SNRPD3-205ENST00000468770 SNURFQ9Y675 71 aa3.29□□□□□ -1.88
SNRPD3-205ENST00000468770 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
SNRPD3-205ENST00000468770 CYP4F30PQ9H0H9 118 aa3.28□□□□□ -1.88
SNRPD3-205ENST00000468770 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
SNRPD3-205ENST00000468770 LOC101927531A0A1B0GV80 90 aa3.25□□□□□ -1.89
SNRPD3-205ENST00000468770 H3BPC8 53 aa3.25□□□□□ -1.89
SNRPD3-205ENST00000468770 H7BZZ5 65 aa3.25□□□□□ -1.89
SNRPD3-205ENST00000468770 BRK1Q8WUW1 75 aa3.25□□□□□ -1.89
SNRPD3-205ENST00000468770 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
SNRPD3-205ENST00000468770 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
SNRPD3-205ENST00000468770 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
SNRPD3-205ENST00000468770 Q5VV11 94 aa3.23□□□□□ -1.89
SNRPD3-205ENST00000468770 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
SNRPD3-205ENST00000468770 A6NN06 94 aa3.22□□□□□ -1.89
SNRPD3-205ENST00000468770 CYSTM1Q9H1C7 97 aa3.22□□□□□ -1.89
SNRPD3-205ENST00000468770 H0Y9P7 68 aa3.21□□□□□ -1.9
SNRPD3-205ENST00000468770 MT1BP07438 61 aa3.21□□□□□ -1.9
SNRPD3-205ENST00000468770 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
SNRPD3-205ENST00000468770 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
SNRPD3-205ENST00000468770 LINC00208Q96KT6 92 aa3.2□□□□□ -1.9
SNRPD3-205ENST00000468770 CRIPTQ9P021 101 aa3.19□□□□□ -1.9
SNRPD3-205ENST00000468770 A8MUN3 132 aa3.16□□□□□ -1.9
SNRPD3-205ENST00000468770 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
SNRPD3-205ENST00000468770 H0YAA0 97 aa3.15□□□□□ -1.91
SNRPD3-205ENST00000468770 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
SNRPD3-205ENST00000468770 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
SNRPD3-205ENST00000468770 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
SNRPD3-205ENST00000468770 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
SNRPD3-205ENST00000468770 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
SNRPD3-205ENST00000468770 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
SNRPD3-205ENST00000468770 Q1T7F1 81 aa3.09□□□□□ -1.91
SNRPD3-205ENST00000468770 CHKB-CPT1BH3BT56 60 aa3.08□□□□□ -1.92
SNRPD3-205ENST00000468770 NEBP20929 6669 aa3.08□□□□□ -1.92
SNRPD3-205ENST00000468770 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
SNRPD3-205ENST00000468770 ACYP2P14621 99 aa3.07□□□□□ -1.92
SNRPD3-205ENST00000468770 COA5Q86WW8 74 aa3.06□□□□□ -1.92
SNRPD3-205ENST00000468770 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
SNRPD3-205ENST00000468770 PRO2289Q9P1D8 64 aa3.06□□□□□ -1.92
SNRPD3-205ENST00000468770 R4GN34 69 aa3.06□□□□□ -1.92
SNRPD3-205ENST00000468770 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
SNRPD3-205ENST00000468770 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
SNRPD3-205ENST00000468770 PSPHP1O15172 72 aa3.04□□□□□ -1.92
SNRPD3-205ENST00000468770 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
SNRPD3-205ENST00000468770 P0C880 135 aa3.03□□□□□ -1.92
SNRPD3-205ENST00000468770 M0QZ58 72 aa3.02□□□□□ -1.93
SNRPD3-205ENST00000468770 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
SNRPD3-205ENST00000468770 KMT2DO14686 5537 aa3.02□□□□□ -1.93
SNRPD3-205ENST00000468770 A6NED7 52 aa3.01□□□□□ -1.93
SNRPD3-205ENST00000468770 MT1XP80297 61 aa3.01□□□□□ -1.93
SNRPD3-205ENST00000468770 H3BS24 57 aa3□□□□□ -1.93
SNRPD3-205ENST00000468770 LINC01554Q52M75 96 aa3□□□□□ -1.93
SNRPD3-205ENST00000468770 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
SNRPD3-205ENST00000468770 LINC01558Q9Y6Z2 57 aa2.99□□□□□ -1.93
SNRPD3-205ENST00000468770 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
SNRPD3-205ENST00000468770 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
SNRPD3-205ENST00000468770 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
SNRPD3-205ENST00000468770 A0A1B0GU69 56 aa2.96□□□□□ -1.94
SNRPD3-205ENST00000468770 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
SNRPD3-205ENST00000468770 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
SNRPD3-205ENST00000468770 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
SNRPD3-205ENST00000468770 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
SNRPD3-205ENST00000468770 SPRR2EP22531 72 aa2.93□□□□□ -1.94
SNRPD3-205ENST00000468770 SPRR2BP35325 72 aa2.93□□□□□ -1.94
SNRPD3-205ENST00000468770 SPRR2AP35326 72 aa2.93□□□□□ -1.94
SNRPD3-205ENST00000468770 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
SNRPD3-205ENST00000468770 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
SNRPD3-205ENST00000468770 UQCR11O14957 56 aa2.9□□□□□ -1.95
SNRPD3-205ENST00000468770 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
SNRPD3-205ENST00000468770 MIR22HGQ0VDD5 57 aa2.87□□□□□ -1.95
SNRPD3-205ENST00000468770 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
SNRPD3-205ENST00000468770 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms