RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
HDAC3-203ENST00000467533 S4R3F8 94 aa4.3□□□□□ -1.72
HDAC3-203ENST00000467533 FAM240AA0A1B0GVK7 77 aa4.29□□□□□ -1.72
HDAC3-203ENST00000467533 LCA10Q71F78 164 aa4.29□□□□□ -1.72
HDAC3-203ENST00000467533 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
HDAC3-203ENST00000467533 C7orf65Q6ZTY9 151 aa4.28□□□□□ -1.72
HDAC3-203ENST00000467533 Q6ZVQ6 151 aa4.28□□□□□ -1.72
HDAC3-203ENST00000467533 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
HDAC3-203ENST00000467533 K7ERU9 68 aa4.27□□□□□ -1.73
HDAC3-203ENST00000467533 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
HDAC3-203ENST00000467533 MT1XP80297 61 aa4.27□□□□□ -1.73
HDAC3-203ENST00000467533 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
HDAC3-203ENST00000467533 NREPQ16612 68 aa4.26□□□□□ -1.73
HDAC3-203ENST00000467533 UBL5Q9BZL1 73 aa4.26□□□□□ -1.73
HDAC3-203ENST00000467533 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
HDAC3-203ENST00000467533 NDUFS5O43920 106 aa4.23□□□□□ -1.73
HDAC3-203ENST00000467533 SEC61GP60059 68 aa4.23□□□□□ -1.73
HDAC3-203ENST00000467533 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
HDAC3-203ENST00000467533 BPY2O14599 106 aa4.2□□□□□ -1.74
HDAC3-203ENST00000467533 LINC00643Q86TS7 51 aa4.2□□□□□ -1.74
HDAC3-203ENST00000467533 TMEM254Q8TBM7 123 aa4.2□□□□□ -1.74
HDAC3-203ENST00000467533 CXCL6P80162 114 aa4.19□□□□□ -1.74
HDAC3-203ENST00000467533 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
HDAC3-203ENST00000467533 ATP5EP2Q5VTU8 51 aa4.19□□□□□ -1.74
HDAC3-203ENST00000467533 MMP24-AS1A0A0U1RRL7 71 aa4.17□□□□□ -1.74
HDAC3-203ENST00000467533 Q5W150 140 aa4.15□□□□□ -1.75
HDAC3-203ENST00000467533 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
HDAC3-203ENST00000467533 KRTAP3-1Q9BYR8 98 aa4.15□□□□□ -1.75
HDAC3-203ENST00000467533 K7EQZ3 153 aa4.14□□□□□ -1.75
HDAC3-203ENST00000467533 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
HDAC3-203ENST00000467533 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
HDAC3-203ENST00000467533 hDV103S1A0JD37 113 aa4.13□□□□□ -1.75
HDAC3-203ENST00000467533 Q8N9L7 120 aa4.12□□□□□ -1.75
HDAC3-203ENST00000467533 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
HDAC3-203ENST00000467533 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
HDAC3-203ENST00000467533 A8MUN3 132 aa4.11□□□□□ -1.75
HDAC3-203ENST00000467533 HIST1H4AP62805 103 aaKnown RBP4.11□□□□□ -1.75
HDAC3-203ENST00000467533 MT-ATP8P03928 68 aa4.1□□□□□ -1.75
HDAC3-203ENST00000467533 V9GYY9 64 aa4.1□□□□□ -1.75
HDAC3-203ENST00000467533 MT4P47944 62 aa4.09□□□□□ -1.75
HDAC3-203ENST00000467533 HCG22E2RYF7 251 aa4.08□□□□□ -1.76
HDAC3-203ENST00000467533 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
HDAC3-203ENST00000467533 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
HDAC3-203ENST00000467533 KRTAP3-3Q9BYR6 98 aa4.08□□□□□ -1.76
HDAC3-203ENST00000467533 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
HDAC3-203ENST00000467533 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
HDAC3-203ENST00000467533 A0A087WVE0 104 aa4.06□□□□□ -1.76
HDAC3-203ENST00000467533 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
HDAC3-203ENST00000467533 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
HDAC3-203ENST00000467533 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
HDAC3-203ENST00000467533 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
HDAC3-203ENST00000467533 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
HDAC3-203ENST00000467533 PRO0628Q9UI54 55 aa4.01□□□□□ -1.77
HDAC3-203ENST00000467533 UQCRQO14949 82 aa3.98□□□□□ -1.77
HDAC3-203ENST00000467533 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
HDAC3-203ENST00000467533 H0YAA0 97 aa3.97□□□□□ -1.77
HDAC3-203ENST00000467533 ATOX1O00244 68 aa3.97□□□□□ -1.77
HDAC3-203ENST00000467533 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
HDAC3-203ENST00000467533 ADM2Q7Z4H4 148 aa3.96□□□□□ -1.78
HDAC3-203ENST00000467533 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
HDAC3-203ENST00000467533 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
HDAC3-203ENST00000467533 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
HDAC3-203ENST00000467533 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
HDAC3-203ENST00000467533 SERP2Q8N6R1 65 aa3.92□□□□□ -1.78
HDAC3-203ENST00000467533 H0Y9P7 68 aa3.91□□□□□ -1.78
HDAC3-203ENST00000467533 H3BPC8 53 aa3.91□□□□□ -1.78
HDAC3-203ENST00000467533 MP68P56378 58 aa3.91□□□□□ -1.78
HDAC3-203ENST00000467533 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
HDAC3-203ENST00000467533 R4GN34 69 aa3.91□□□□□ -1.78
HDAC3-203ENST00000467533 LOC101927531A0A1B0GV80 90 aa3.9□□□□□ -1.79
HDAC3-203ENST00000467533 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.79
HDAC3-203ENST00000467533 NDUFC1O43677 76 aa3.88□□□□□ -1.79
HDAC3-203ENST00000467533 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
HDAC3-203ENST00000467533 COX7CP15954 63 aa3.87□□□□□ -1.79
HDAC3-203ENST00000467533 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
HDAC3-203ENST00000467533 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
HDAC3-203ENST00000467533 M0QZ58 72 aa3.86□□□□□ -1.79
HDAC3-203ENST00000467533 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
HDAC3-203ENST00000467533 C20orf197Q8N268 126 aa3.84□□□□□ -1.79
HDAC3-203ENST00000467533 MT1EP04732 61 aa3.83□□□□□ -1.8
HDAC3-203ENST00000467533 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
HDAC3-203ENST00000467533 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
HDAC3-203ENST00000467533 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
HDAC3-203ENST00000467533 SNURFQ9Y675 71 aa3.81□□□□□ -1.8
HDAC3-203ENST00000467533 H3BS24 57 aa3.79□□□□□ -1.8
HDAC3-203ENST00000467533 CCDC179H3BU77 68 aa3.79□□□□□ -1.8
HDAC3-203ENST00000467533 P0C880 135 aa3.77□□□□□ -1.81
HDAC3-203ENST00000467533 TMEM258P61165 79 aa3.77□□□□□ -1.81
HDAC3-203ENST00000467533 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
HDAC3-203ENST00000467533 SPANXA2-OT1Q8N9U9 137 aa3.75□□□□□ -1.81
HDAC3-203ENST00000467533 H7BZZ5 65 aa3.74□□□□□ -1.81
HDAC3-203ENST00000467533 MT1GP13640 62 aa3.73□□□□□ -1.81
HDAC3-203ENST00000467533 DMAC1Q96GE9 116 aa3.72□□□□□ -1.81
HDAC3-203ENST00000467533 ACYP2P14621 99 aa3.69□□□□□ -1.82
HDAC3-203ENST00000467533 MT1MQ8N339 61 aa3.69□□□□□ -1.82
HDAC3-203ENST00000467533 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
HDAC3-203ENST00000467533 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
HDAC3-203ENST00000467533 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
HDAC3-203ENST00000467533 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
HDAC3-203ENST00000467533 SERP1Q9Y6X1 66 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms