RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 H7BZZ5 65 aa6.31□□□□□ -1.4
R3HDM1-213ENST00000463230 KLKP1Q107X0 134 aa6.3□□□□□ -1.4
R3HDM1-213ENST00000463230 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
R3HDM1-213ENST00000463230 MT1FP04733 61 aa6.28□□□□□ -1.4
R3HDM1-213ENST00000463230 C4orf26Q17RF5 130 aa6.28□□□□□ -1.4
R3HDM1-213ENST00000463230 TRAV22A0A0B4J277 110 aa6.27□□□□□ -1.41
R3HDM1-213ENST00000463230 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
R3HDM1-213ENST00000463230 LOC101927531A0A1B0GV80 90 aa6.25□□□□□ -1.41
R3HDM1-213ENST00000463230 CYP4F30PQ9H0H9 118 aa6.23□□□□□ -1.41
R3HDM1-213ENST00000463230 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
R3HDM1-213ENST00000463230 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
R3HDM1-213ENST00000463230 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-213ENST00000463230 NDUFC1O43677 76 aa6.18□□□□□ -1.42
R3HDM1-213ENST00000463230 S4R3F8 94 aa6.18□□□□□ -1.42
R3HDM1-213ENST00000463230 H0Y9P7 68 aa6.17□□□□□ -1.42
R3HDM1-213ENST00000463230 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
R3HDM1-213ENST00000463230 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
R3HDM1-213ENST00000463230 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.43
R3HDM1-213ENST00000463230 SERP1Q9Y6X1 66 aa6.15□□□□□ -1.43
R3HDM1-213ENST00000463230 C5orf47Q569G3 176 aa6.13□□□□□ -1.43
R3HDM1-213ENST00000463230 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
R3HDM1-213ENST00000463230 MP68P56378 58 aa6.11□□□□□ -1.43
R3HDM1-213ENST00000463230 LINC00208Q96KT6 92 aa6.11□□□□□ -1.43
R3HDM1-213ENST00000463230 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-213ENST00000463230 LCA10Q71F78 164 aa6.1□□□□□ -1.43
R3HDM1-213ENST00000463230 USH2AO75445 5202 aa6.1□□□□□ -1.43
R3HDM1-213ENST00000463230 H3BPC8 53 aa6.09□□□□□ -1.44
R3HDM1-213ENST00000463230 A8MUN3 132 aa6.07□□□□□ -1.44
R3HDM1-213ENST00000463230 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
R3HDM1-213ENST00000463230 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
R3HDM1-213ENST00000463230 SMIM26A0A096LP01 95 aa6.02□□□□□ -1.45
R3HDM1-213ENST00000463230 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
R3HDM1-213ENST00000463230 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
R3HDM1-213ENST00000463230 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
R3HDM1-213ENST00000463230 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
R3HDM1-213ENST00000463230 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
R3HDM1-213ENST00000463230 H0YAA0 97 aa5.95□□□□□ -1.46
R3HDM1-213ENST00000463230 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
R3HDM1-213ENST00000463230 CRIPTQ9P021 101 aa5.94□□□□□ -1.46
R3HDM1-213ENST00000463230 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
R3HDM1-213ENST00000463230 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
R3HDM1-213ENST00000463230 DMAC1Q96GE9 116 aa5.9□□□□□ -1.46
R3HDM1-213ENST00000463230 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.47
R3HDM1-213ENST00000463230 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-213ENST00000463230 KRTAP19-8Q3LI54 63 aa5.88□□□□□ -1.47
R3HDM1-213ENST00000463230 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-213ENST00000463230 Q5VV11 94 aa5.86□□□□□ -1.47
R3HDM1-213ENST00000463230 COA5Q86WW8 74 aa5.86□□□□□ -1.47
R3HDM1-213ENST00000463230 PSPHP1O15172 72 aa5.84□□□□□ -1.47
R3HDM1-213ENST00000463230 Q1T7F1 81 aa5.83□□□□□ -1.48
R3HDM1-213ENST00000463230 MT1BP07438 61 aa5.82□□□□□ -1.48
R3HDM1-213ENST00000463230 ADM2Q7Z4H4 148 aa5.8□□□□□ -1.48
R3HDM1-213ENST00000463230 BRK1Q8WUW1 75 aa5.8□□□□□ -1.48
R3HDM1-213ENST00000463230 ACYP2P14621 99 aa5.79□□□□□ -1.48
R3HDM1-213ENST00000463230 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
R3HDM1-213ENST00000463230 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
R3HDM1-213ENST00000463230 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
R3HDM1-213ENST00000463230 V9GYY9 64 aa5.72□□□□□ -1.49
R3HDM1-213ENST00000463230 A6NN06 94 aa5.71□□□□□ -1.49
R3HDM1-213ENST00000463230 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.49
R3HDM1-213ENST00000463230 A8MU10 97 aa5.68□□□□□ -1.5
R3HDM1-213ENST00000463230 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
R3HDM1-213ENST00000463230 CHKB-CPT1BH3BT56 60 aa5.68□□□□□ -1.5
R3HDM1-213ENST00000463230 R4GN34 69 aa5.66□□□□□ -1.5
R3HDM1-213ENST00000463230 P0C880 135 aa5.66□□□□□ -1.5
R3HDM1-213ENST00000463230 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
R3HDM1-213ENST00000463230 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-213ENST00000463230 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
R3HDM1-213ENST00000463230 M0QZ58 72 aa5.61□□□□□ -1.51
R3HDM1-213ENST00000463230 A6NED7 52 aa5.6□□□□□ -1.51
R3HDM1-213ENST00000463230 KRTAP6-3Q3LI67 103 aa5.59□□□□□ -1.51
R3HDM1-213ENST00000463230 PLAC4Q8WY50 150 aa5.59□□□□□ -1.52
R3HDM1-213ENST00000463230 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
R3HDM1-213ENST00000463230 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
R3HDM1-213ENST00000463230 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
R3HDM1-213ENST00000463230 A0A1B0GU69 56 aa5.51□□□□□ -1.53
R3HDM1-213ENST00000463230 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
R3HDM1-213ENST00000463230 MT1XP80297 61 aa5.48□□□□□ -1.53
R3HDM1-213ENST00000463230 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
R3HDM1-213ENST00000463230 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
R3HDM1-213ENST00000463230 KRTAP12-2P59991 146 aa5.4□□□□□ -1.55
R3HDM1-213ENST00000463230 KRTAP5-9P26371 169 aa5.39□□□□□ -1.55
R3HDM1-213ENST00000463230 UQCR11O14957 56 aa5.36□□□□□ -1.55
R3HDM1-213ENST00000463230 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
R3HDM1-213ENST00000463230 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
R3HDM1-213ENST00000463230 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
R3HDM1-213ENST00000463230 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
R3HDM1-213ENST00000463230 NEBP20929 6669 aa5.3□□□□□ -1.56
R3HDM1-213ENST00000463230 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
R3HDM1-213ENST00000463230 NDUFAF8A1L188 74 aa5.27□□□□□ -1.57
R3HDM1-213ENST00000463230 A0A1B0GU33 70 aa5.27□□□□□ -1.57
R3HDM1-213ENST00000463230 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
R3HDM1-213ENST00000463230 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
R3HDM1-213ENST00000463230 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
R3HDM1-213ENST00000463230 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
R3HDM1-213ENST00000463230 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
R3HDM1-213ENST00000463230 KMT2DO14686 5537 aa5.17□□□□□ -1.58
R3HDM1-213ENST00000463230 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
R3HDM1-213ENST00000463230 A0A0D9SG42 100 aa5.17□□□□□ -1.58
R3HDM1-213ENST00000463230 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms