RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PPP1R1CQ8WVI7 109 aa0.67□□□□□ -2.3
HMGB3P12-201ENST00000438745 NDUFC2O95298 119 aa0.66□□□□□ -2.3
HMGB3P12-201ENST00000438745 MPC2O95563 127 aa0.66□□□□□ -2.3
HMGB3P12-201ENST00000438745 IL7P13232 177 aa0.66□□□□□ -2.3
HMGB3P12-201ENST00000438745 PRELID3AQ96N28 172 aa0.66□□□□□ -2.3
HMGB3P12-201ENST00000438745 GNG13Q9P2W3 67 aa0.66□□□□□ -2.3
HMGB3P12-201ENST00000438745 H3BUT2 72 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 M0QZ58 72 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 S100A8P05109 93 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 NPC2P61916 151 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 TEN1Q86WV5 123 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 Q8N8P6 123 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 FAM213BQ8TBF2 198 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 MANBALQ9NQG1 85 aa0.65□□□□□ -2.31
HMGB3P12-201ENST00000438745 MYMXA0A1B0GTQ4 84 aa0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 TAX1BP3O14907 124 aa0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 IGLC3P0DOY3 106 aa0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 ADCYAP1P18509 176 aa0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 MRPL54Q6P161 138 aaKnown RBP0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 SMIM20Q8N5G0 67 aa0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 SNHG12Q9BXW3 62 aa0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 Q9H521 79 aa0.64□□□□□ -2.31
HMGB3P12-201ENST00000438745 K7EMI3 77 aa0.63□□□□□ -2.31
HMGB3P12-201ENST00000438745 SPANXDQ9BXN6 97 aa0.63□□□□□ -2.31
HMGB3P12-201ENST00000438745 NAT8BQ9UHF3 227 aa0.63□□□□□ -2.31
HMGB3P12-201ENST00000438745 TRBV7-6A0A0J9YX20 115 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 A0A1W2PPM0 123 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 hDV103S1A0JD37 113 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 LINC01549A6NIU2 74 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 HBDP02042 147 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 Q6ZQY7 126 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 RAB37Q96AX2 223 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 ORMDL1Q9P0S3 153 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 LAMTOR2Q9Y2Q5 125 aa0.62□□□□□ -2.31
HMGB3P12-201ENST00000438745 A0A0D9SG42 100 aa0.61□□□□□ -2.31
HMGB3P12-201ENST00000438745 TMEM256-PLSCR3K7ERE1 68 aa0.61□□□□□ -2.31
HMGB3P12-201ENST00000438745 LYRM1O43325 122 aa0.61□□□□□ -2.31
HMGB3P12-201ENST00000438745 MT-ATP8P03928 68 aa0.61□□□□□ -2.31
HMGB3P12-201ENST00000438745 LINC00472Q9H8W2 130 aa0.61□□□□□ -2.31
HMGB3P12-201ENST00000438745 SPANXCQ9NY87 97 aa0.61□□□□□ -2.31
HMGB3P12-201ENST00000438745 V9GYH0 126 aa0.61□□□□□ -2.31
HMGB3P12-201ENST00000438745 UMAD1C9J7I0 102 aa0.6□□□□□ -2.31
HMGB3P12-201ENST00000438745 NDUFB1O75438 58 aa0.6□□□□□ -2.31
HMGB3P12-201ENST00000438745 ROMO1P60602 79 aa0.6□□□□□ -2.31
HMGB3P12-201ENST00000438745 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
HMGB3P12-201ENST00000438745 BAGE3Q86Y29 109 aa0.6□□□□□ -2.31
HMGB3P12-201ENST00000438745 MUSTN1Q8IVN3 82 aa0.6□□□□□ -2.31
HMGB3P12-201ENST00000438745 hADV29S1A0JD25 119 aa0.59□□□□□ -2.31
HMGB3P12-201ENST00000438745 MT1AP04731 61 aa0.59□□□□□ -2.31
HMGB3P12-201ENST00000438745 LINC00575Q6W349 94 aa0.59□□□□□ -2.31
HMGB3P12-201ENST00000438745 C20orf197Q8N268 126 aa0.59□□□□□ -2.31
HMGB3P12-201ENST00000438745 BATF3Q9NR55 127 aa0.59□□□□□ -2.31
HMGB3P12-201ENST00000438745 LINC01546A6NGU7 62 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 HCG22E2RYF7 251 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 F8W1H4 67 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 NDUFC1O43677 76 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 TRGC2P03986 189 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 PPDPFLQ8WWR9 84 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 SMCO4Q9NRQ5 59 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 V9GYV3 84 aa0.58□□□□□ -2.32
HMGB3P12-201ENST00000438745 A0A087WVE0 104 aa0.57□□□□□ -2.32
HMGB3P12-201ENST00000438745 K7ERJ3 54 aa0.57□□□□□ -2.32
HMGB3P12-201ENST00000438745 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
HMGB3P12-201ENST00000438745 C12orf57Q99622 126 aa0.57□□□□□ -2.32
HMGB3P12-201ENST00000438745 SMIM7Q9BQ49 75 aa0.57□□□□□ -2.32
HMGB3P12-201ENST00000438745 SMIM27A0A1W2PRY6 76 aa0.56□□□□□ -2.32
HMGB3P12-201ENST00000438745 H3BMG7 143 aa0.56□□□□□ -2.32
HMGB3P12-201ENST00000438745 J3KT08 172 aa0.56□□□□□ -2.32
HMGB3P12-201ENST00000438745 TRACP01848 142 aa0.56□□□□□ -2.32
HMGB3P12-201ENST00000438745 TCTE3Q8IZS6 198 aa0.56□□□□□ -2.32
HMGB3P12-201ENST00000438745 LINC00308Q8TCZ7 52 aa0.56□□□□□ -2.32
HMGB3P12-201ENST00000438745 CHCHD1Q96BP2 118 aaKnown RBP0.56□□□□□ -2.32
HMGB3P12-201ENST00000438745 TRBV7-4A0A0J9YYF1 115 aa0.55□□□□□ -2.32
HMGB3P12-201ENST00000438745 A0A1B0GV72 72 aa0.55□□□□□ -2.32
HMGB3P12-201ENST00000438745 ADIRFQ15847 76 aa0.55□□□□□ -2.32
HMGB3P12-201ENST00000438745 MRPL34Q9BQ48 92 aaKnown RBP0.55□□□□□ -2.32
HMGB3P12-201ENST00000438745 ARPC5O15511 151 aa0.54□□□□□ -2.32
HMGB3P12-201ENST00000438745 SMIM11BQ8TCY0 68 aa0.54□□□□□ -2.32
HMGB3P12-201ENST00000438745 VPS25Q9BRG1 176 aa0.54□□□□□ -2.32
HMGB3P12-201ENST00000438745 KANTRA0A1W2PQU2 76 aa0.53□□□□□ -2.32
HMGB3P12-201ENST00000438745 HIST1H2BKO60814 126 aa0.53□□□□□ -2.32
HMGB3P12-201ENST00000438745 SNCGO76070 127 aa0.53□□□□□ -2.32
HMGB3P12-201ENST00000438745 CCKP06307 115 aa0.53□□□□□ -2.32
HMGB3P12-201ENST00000438745 HIST1H2BJP06899 126 aa0.53□□□□□ -2.32
HMGB3P12-201ENST00000438745 FABP2P12104 132 aa0.53□□□□□ -2.32
HMGB3P12-201ENST00000438745 COX7CP15954 63 aa0.53□□□□□ -2.32
HMGB3P12-201ENST00000438745 COPS9Q8WXC6 57 aa0.52□□□□□ -2.33
HMGB3P12-201ENST00000438745 HSPB8Q9UJY1 196 aa0.52□□□□□ -2.33
HMGB3P12-201ENST00000438745 TSTD3H0UI37 97 aa0.51□□□□□ -2.33
HMGB3P12-201ENST00000438745 JMJD7-PLA2G4BH0Y9G9 81 aa0.51□□□□□ -2.33
HMGB3P12-201ENST00000438745 IFITM1P13164 125 aa0.51□□□□□ -2.33
HMGB3P12-201ENST00000438745 PLNP26678 52 aa0.51□□□□□ -2.33
HMGB3P12-201ENST00000438745 PMCHL1Q16048 86 aa0.51□□□□□ -2.33
HMGB3P12-201ENST00000438745 S100ZQ8WXG8 99 aa0.51□□□□□ -2.33
HMGB3P12-201ENST00000438745 MMP24-AS1A0A0U1RRL7 71 aa0.5□□□□□ -2.33
HMGB3P12-201ENST00000438745 LOC105371267A0A1B0GV96 52 aa0.5□□□□□ -2.33
HMGB3P12-201ENST00000438745 MIR22HGQ0VDD5 57 aa0.5□□□□□ -2.33
HMGB3P12-201ENST00000438745 IFI27L1Q96BM0 104 aa0.5□□□□□ -2.33
HMGB3P12-201ENST00000438745 FABP4P15090 132 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms