RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
APOBEC3C-202ENST00000428892 ATP11AUNQ6ZP68 121 aa5.62□□□□□ -1.51
APOBEC3C-202ENST00000428892 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
APOBEC3C-202ENST00000428892 TMEM258P61165 79 aa5.61□□□□□ -1.51
APOBEC3C-202ENST00000428892 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
APOBEC3C-202ENST00000428892 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
APOBEC3C-202ENST00000428892 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
APOBEC3C-202ENST00000428892 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
APOBEC3C-202ENST00000428892 USH2AO75445 5202 aa5.59□□□□□ -1.51
APOBEC3C-202ENST00000428892 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
APOBEC3C-202ENST00000428892 H7BZZ5 65 aa5.57□□□□□ -1.52
APOBEC3C-202ENST00000428892 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
APOBEC3C-202ENST00000428892 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
APOBEC3C-202ENST00000428892 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
APOBEC3C-202ENST00000428892 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
APOBEC3C-202ENST00000428892 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
APOBEC3C-202ENST00000428892 FAM236DA0A1B0GTK5 79 aa5.54□□□□□ -1.52
APOBEC3C-202ENST00000428892 FAM236CP0DP71 79 aa5.54□□□□□ -1.52
APOBEC3C-202ENST00000428892 Q5W150 140 aa5.52□□□□□ -1.53
APOBEC3C-202ENST00000428892 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
APOBEC3C-202ENST00000428892 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
APOBEC3C-202ENST00000428892 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
APOBEC3C-202ENST00000428892 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
APOBEC3C-202ENST00000428892 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
APOBEC3C-202ENST00000428892 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
APOBEC3C-202ENST00000428892 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
APOBEC3C-202ENST00000428892 HRES1P13985 223 aa5.46□□□□□ -1.54
APOBEC3C-202ENST00000428892 RPS28P62857 69 aaKnown RBP5.45□□□□□ -1.54
APOBEC3C-202ENST00000428892 IGKV2D-30A0A075B6S6 120 aa5.44□□□□□ -1.54
APOBEC3C-202ENST00000428892 SERP1Q9Y6X1 66 aa5.44□□□□□ -1.54
APOBEC3C-202ENST00000428892 C7orf65Q6ZTY9 151 aa5.43□□□□□ -1.54
APOBEC3C-202ENST00000428892 MT2AP02795 61 aa5.42□□□□□ -1.54
APOBEC3C-202ENST00000428892 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
APOBEC3C-202ENST00000428892 SPINK7P58062 85 aa5.39□□□□□ -1.55
APOBEC3C-202ENST00000428892 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
APOBEC3C-202ENST00000428892 MT1FP04733 61 aa5.38□□□□□ -1.55
APOBEC3C-202ENST00000428892 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
APOBEC3C-202ENST00000428892 ACYP2P14621 99 aa5.35□□□□□ -1.55
APOBEC3C-202ENST00000428892 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
APOBEC3C-202ENST00000428892 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
APOBEC3C-202ENST00000428892 A8MUN3 132 aa5.3□□□□□ -1.56
APOBEC3C-202ENST00000428892 COA5Q86WW8 74 aa5.3□□□□□ -1.56
APOBEC3C-202ENST00000428892 CHKB-CPT1BH3BT56 60 aa5.29□□□□□ -1.56
APOBEC3C-202ENST00000428892 C4orf26Q17RF5 130 aa5.27□□□□□ -1.57
APOBEC3C-202ENST00000428892 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
APOBEC3C-202ENST00000428892 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
APOBEC3C-202ENST00000428892 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
APOBEC3C-202ENST00000428892 V9GYY9 64 aa5.24□□□□□ -1.57
APOBEC3C-202ENST00000428892 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
APOBEC3C-202ENST00000428892 SPTSSBQ8NFR3 76 aa5.21□□□□□ -1.58
APOBEC3C-202ENST00000428892 H1FX-AS1Q4G0G2 97 aa5.19□□□□□ -1.58
APOBEC3C-202ENST00000428892 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
APOBEC3C-202ENST00000428892 Q1T7F1 81 aa5.17□□□□□ -1.58
APOBEC3C-202ENST00000428892 NEBP20929 6669 aa5.14□□□□□ -1.59
APOBEC3C-202ENST00000428892 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
APOBEC3C-202ENST00000428892 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
APOBEC3C-202ENST00000428892 SEC61GP60059 68 aa5.08□□□□□ -1.6
APOBEC3C-202ENST00000428892 S4R3F8 94 aa5.08□□□□□ -1.6
APOBEC3C-202ENST00000428892 PSPHP1O15172 72 aa5.07□□□□□ -1.6
APOBEC3C-202ENST00000428892 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
APOBEC3C-202ENST00000428892 A0A1B0GU69 56 aa5.06□□□□□ -1.6
APOBEC3C-202ENST00000428892 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
APOBEC3C-202ENST00000428892 LCA10Q71F78 164 aa5.01□□□□□ -1.61
APOBEC3C-202ENST00000428892 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
APOBEC3C-202ENST00000428892 A6NN06 94 aa5□□□□□ -1.61
APOBEC3C-202ENST00000428892 Q5VV11 94 aa4.99□□□□□ -1.61
APOBEC3C-202ENST00000428892 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
APOBEC3C-202ENST00000428892 A6NED7 52 aa4.96□□□□□ -1.62
APOBEC3C-202ENST00000428892 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
APOBEC3C-202ENST00000428892 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
APOBEC3C-202ENST00000428892 BRK1Q8WUW1 75 aa4.93□□□□□ -1.62
APOBEC3C-202ENST00000428892 UQCR11O14957 56 aa4.91□□□□□ -1.62
APOBEC3C-202ENST00000428892 A0A1B0GU33 70 aa4.88□□□□□ -1.63
APOBEC3C-202ENST00000428892 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
APOBEC3C-202ENST00000428892 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
APOBEC3C-202ENST00000428892 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
APOBEC3C-202ENST00000428892 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
APOBEC3C-202ENST00000428892 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
APOBEC3C-202ENST00000428892 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
APOBEC3C-202ENST00000428892 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
APOBEC3C-202ENST00000428892 H0YAA0 97 aa4.83□□□□□ -1.64
APOBEC3C-202ENST00000428892 MT1BP07438 61 aa4.83□□□□□ -1.64
APOBEC3C-202ENST00000428892 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
APOBEC3C-202ENST00000428892 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
APOBEC3C-202ENST00000428892 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
APOBEC3C-202ENST00000428892 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
APOBEC3C-202ENST00000428892 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
APOBEC3C-202ENST00000428892 KMT2DO14686 5537 aa4.8□□□□□ -1.64
APOBEC3C-202ENST00000428892 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
APOBEC3C-202ENST00000428892 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
APOBEC3C-202ENST00000428892 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
APOBEC3C-202ENST00000428892 P0C880 135 aa4.77□□□□□ -1.65
APOBEC3C-202ENST00000428892 M0QZ58 72 aa4.75□□□□□ -1.65
APOBEC3C-202ENST00000428892 MT3P25713 68 aa4.74□□□□□ -1.65
APOBEC3C-202ENST00000428892 K7ERS5 55 aa4.72□□□□□ -1.65
APOBEC3C-202ENST00000428892 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
APOBEC3C-202ENST00000428892 A8MU10 97 aa4.71□□□□□ -1.66
APOBEC3C-202ENST00000428892 SPRR2EP22531 72 aa4.71□□□□□ -1.66
APOBEC3C-202ENST00000428892 SPRR2BP35325 72 aa4.71□□□□□ -1.66
APOBEC3C-202ENST00000428892 SPRR2AP35326 72 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms