RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 LINC00208Q96KT6 92 aa3.61□□□□□ -1.83
CDC7-203ENST00000428239 A6NED7 52 aa3.6□□□□□ -1.83
CDC7-203ENST00000428239 NDUFC1O43677 76 aa3.6□□□□□ -1.83
CDC7-203ENST00000428239 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
CDC7-203ENST00000428239 PSPHP1O15172 72 aa3.59□□□□□ -1.83
CDC7-203ENST00000428239 SNURFQ9Y675 71 aa3.59□□□□□ -1.83
CDC7-203ENST00000428239 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.84
CDC7-203ENST00000428239 LOC101927531A0A1B0GV80 90 aa3.58□□□□□ -1.84
CDC7-203ENST00000428239 TRAV7A0A075B6U4 112 aa3.57□□□□□ -1.84
CDC7-203ENST00000428239 HRES1P13985 223 aa3.57□□□□□ -1.84
CDC7-203ENST00000428239 CYP4F30PQ9H0H9 118 aa3.54□□□□□ -1.84
CDC7-203ENST00000428239 OCR1Q9BZK8 76 aa3.54□□□□□ -1.84
CDC7-203ENST00000428239 Q5VV11 94 aa3.52□□□□□ -1.85
CDC7-203ENST00000428239 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
CDC7-203ENST00000428239 FAT4Q6V0I7 4981 aa3.51□□□□□ -1.85
CDC7-203ENST00000428239 H1FX-AS1Q4G0G2 97 aa3.51□□□□□ -1.85
CDC7-203ENST00000428239 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
CDC7-203ENST00000428239 MT1HP80294 61 aa3.5□□□□□ -1.85
CDC7-203ENST00000428239 H3BPC8 53 aa3.49□□□□□ -1.85
CDC7-203ENST00000428239 LCE2CQ5TA81 110 aa3.49□□□□□ -1.85
CDC7-203ENST00000428239 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
CDC7-203ENST00000428239 S4R3F8 94 aa3.47□□□□□ -1.85
CDC7-203ENST00000428239 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
CDC7-203ENST00000428239 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
CDC7-203ENST00000428239 LCE2DQ5TA82 110 aaPredicted RBP3.44□□□□□ -1.86
CDC7-203ENST00000428239 CSAG1Q6PB30 78 aa3.44□□□□□ -1.86
CDC7-203ENST00000428239 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
CDC7-203ENST00000428239 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
CDC7-203ENST00000428239 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
CDC7-203ENST00000428239 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
CDC7-203ENST00000428239 KRTAP3-1Q9BYR8 98 aa3.4□□□□□ -1.87
CDC7-203ENST00000428239 ACYP2P14621 99 aa3.39□□□□□ -1.87
CDC7-203ENST00000428239 ROMO1P60602 79 aa3.39□□□□□ -1.87
CDC7-203ENST00000428239 LORP23490 312 aaPredicted RBP3.36□□□□□ -1.87
CDC7-203ENST00000428239 DMAC1Q96GE9 116 aa3.36□□□□□ -1.87
CDC7-203ENST00000428239 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.87
CDC7-203ENST00000428239 MT2AP02795 61 aa3.32□□□□□ -1.88
CDC7-203ENST00000428239 P0C880 135 aa3.32□□□□□ -1.88
CDC7-203ENST00000428239 SPANXA2-OT1Q8N9U9 137 aa3.31□□□□□ -1.88
CDC7-203ENST00000428239 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
CDC7-203ENST00000428239 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
CDC7-203ENST00000428239 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
CDC7-203ENST00000428239 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
CDC7-203ENST00000428239 MT1FP04733 61 aa3.29□□□□□ -1.88
CDC7-203ENST00000428239 COA5Q86WW8 74 aa3.29□□□□□ -1.88
CDC7-203ENST00000428239 LCE2BO14633 110 aa3.26□□□□□ -1.89
CDC7-203ENST00000428239 K7ERS5 55 aa3.25□□□□□ -1.89
CDC7-203ENST00000428239 R4GN34 69 aa3.25□□□□□ -1.89
CDC7-203ENST00000428239 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
CDC7-203ENST00000428239 LINC01558Q9Y6Z2 57 aa3.23□□□□□ -1.89
CDC7-203ENST00000428239 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
CDC7-203ENST00000428239 M0QZ58 72 aa3.22□□□□□ -1.89
CDC7-203ENST00000428239 H0YAA0 97 aa3.19□□□□□ -1.9
CDC7-203ENST00000428239 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
CDC7-203ENST00000428239 CRIPTQ9P021 101 aa3.18□□□□□ -1.9
CDC7-203ENST00000428239 A0A1B0GU69 56 aa3.17□□□□□ -1.9
CDC7-203ENST00000428239 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
CDC7-203ENST00000428239 CRCT1Q9UGL9 99 aa3.17□□□□□ -1.9
CDC7-203ENST00000428239 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
CDC7-203ENST00000428239 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
CDC7-203ENST00000428239 A0A0D9SG42 100 aa3.13□□□□□ -1.91
CDC7-203ENST00000428239 KRTAP19-1Q8IUB9 90 aa3.12□□□□□ -1.91
CDC7-203ENST00000428239 A0A1B0GU33 70 aa3.11□□□□□ -1.91
CDC7-203ENST00000428239 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
CDC7-203ENST00000428239 SPRR2GQ9BYE4 73 aa3.11□□□□□ -1.91
CDC7-203ENST00000428239 USH2AO75445 5202 aa3.09□□□□□ -1.91
CDC7-203ENST00000428239 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
CDC7-203ENST00000428239 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
CDC7-203ENST00000428239 UQCR11O14957 56 aa3.05□□□□□ -1.92
CDC7-203ENST00000428239 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
CDC7-203ENST00000428239 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
CDC7-203ENST00000428239 MT1BP07438 61 aa3.03□□□□□ -1.92
CDC7-203ENST00000428239 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
CDC7-203ENST00000428239 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
CDC7-203ENST00000428239 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
CDC7-203ENST00000428239 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
CDC7-203ENST00000428239 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
CDC7-203ENST00000428239 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
CDC7-203ENST00000428239 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
CDC7-203ENST00000428239 KRTAP12-1P59990 96 aa2.9□□□□□ -1.94
CDC7-203ENST00000428239 KRTAP12-2P59991 146 aa2.9□□□□□ -1.94
CDC7-203ENST00000428239 MT1XP80297 61 aa2.9□□□□□ -1.95
CDC7-203ENST00000428239 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
CDC7-203ENST00000428239 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
CDC7-203ENST00000428239 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
CDC7-203ENST00000428239 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
CDC7-203ENST00000428239 TNP1P09430 55 aa2.81□□□□□ -1.96
CDC7-203ENST00000428239 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
CDC7-203ENST00000428239 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.96
CDC7-203ENST00000428239 KRTAP10-12P60413 245 aa2.78□□□□□ -1.97
CDC7-203ENST00000428239 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
CDC7-203ENST00000428239 KRTAP4-8Q9BYQ9 185 aa2.77□□□□□ -1.97
CDC7-203ENST00000428239 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
CDC7-203ENST00000428239 KMT2DO14686 5537 aa2.75□□□□□ -1.97
CDC7-203ENST00000428239 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
CDC7-203ENST00000428239 SPRR2EP22531 72 aa2.68□□□□□ -1.98
CDC7-203ENST00000428239 SPRR2BP35325 72 aa2.68□□□□□ -1.98
CDC7-203ENST00000428239 SPRR2AP35326 72 aa2.68□□□□□ -1.98
CDC7-203ENST00000428239 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
CDC7-203ENST00000428239 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms