RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MMP24-AS1A0A0U1RRL7 71 aa2.12□□□□□ -2.07
CLK1-203ENST00000409769 C8orf87E5RJ46 101 aa2.12□□□□□ -2.07
CLK1-203ENST00000409769 NDUFB1O75438 58 aa2.12□□□□□ -2.07
CLK1-203ENST00000409769 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
CLK1-203ENST00000409769 A0A087WVE0 104 aa2.11□□□□□ -2.07
CLK1-203ENST00000409769 A0A0U1RQV1 116 aa2.11□□□□□ -2.07
CLK1-203ENST00000409769 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
CLK1-203ENST00000409769 LINC00313P59037 77 aa2.11□□□□□ -2.07
CLK1-203ENST00000409769 TPRXLQ17RH7 258 aa2.11□□□□□ -2.07
CLK1-203ENST00000409769 C8orf17Q9NRJ1 99 aa2.11□□□□□ -2.07
CLK1-203ENST00000409769 hDV103S1A0JD37 113 aa2.1□□□□□ -2.07
CLK1-203ENST00000409769 HIST1H4AP62805 103 aaKnown RBP2.1□□□□□ -2.07
CLK1-203ENST00000409769 TMEM254Q8TBM7 123 aa2.1□□□□□ -2.07
CLK1-203ENST00000409769 C20orf166-AS1Q96NR2 134 aa2.1□□□□□ -2.07
CLK1-203ENST00000409769 C9orf92A6NGG3 77 aa2.09□□□□□ -2.07
CLK1-203ENST00000409769 CASC2Q6XLA1 102 aa2.09□□□□□ -2.07
CLK1-203ENST00000409769 WFDC13Q8IUB5 93 aa2.09□□□□□ -2.07
CLK1-203ENST00000409769 MRPL34Q9BQ48 92 aaKnown RBP2.09□□□□□ -2.07
CLK1-203ENST00000409769 A8MUU9 505 aa2.08□□□□□ -2.08
CLK1-203ENST00000409769 FAM236AA0A1B0GUQ0 79 aa2.07□□□□□ -2.08
CLK1-203ENST00000409769 FAM236BA0A1B0GV22 79 aa2.07□□□□□ -2.08
CLK1-203ENST00000409769 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
CLK1-203ENST00000409769 SCGB1A1P11684 91 aa2.06□□□□□ -2.08
CLK1-203ENST00000409769 TP53AIP1Q9HCN2 124 aa2.05□□□□□ -2.08
CLK1-203ENST00000409769 ATOX1O00244 68 aa2.04□□□□□ -2.08
CLK1-203ENST00000409769 UQCRQO14949 82 aa2.04□□□□□ -2.08
CLK1-203ENST00000409769 NDUFS5O43920 106 aa2.04□□□□□ -2.08
CLK1-203ENST00000409769 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
CLK1-203ENST00000409769 TRAV7A0A075B6U4 112 aa2.03□□□□□ -2.08
CLK1-203ENST00000409769 PCOTHQ58A44 107 aa2.03□□□□□ -2.08
CLK1-203ENST00000409769 SMIM20Q8N5G0 67 aa2.03□□□□□ -2.08
CLK1-203ENST00000409769 TRAV22A0A0B4J277 110 aa2.02□□□□□ -2.09
CLK1-203ENST00000409769 ATP11AUNQ6ZP68 121 aa2.02□□□□□ -2.09
CLK1-203ENST00000409769 SERP2Q8N6R1 65 aa2.02□□□□□ -2.09
CLK1-203ENST00000409769 KRTAP4-1Q9BYQ7 146 aa2.02□□□□□ -2.09
CLK1-203ENST00000409769 H0Y9P7 68 aa2.01□□□□□ -2.09
CLK1-203ENST00000409769 LOC101927531A0A1B0GV80 90 aa2□□□□□ -2.09
CLK1-203ENST00000409769 H3BPC8 53 aa2□□□□□ -2.09
CLK1-203ENST00000409769 COX7CP15954 63 aa2□□□□□ -2.09
CLK1-203ENST00000409769 ANAPC13Q9BS18 74 aa2□□□□□ -2.09
CLK1-203ENST00000409769 UBR4Q5T4S7 5183 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 HRES1P13985 223 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 MP68P56378 58 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 SPINK7P58062 85 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 KLKP1Q107X0 134 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 C7orf65Q6ZTY9 151 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 SPANXA2-OT1Q8N9U9 137 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 LINC00208Q96KT6 92 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 CYP4F30PQ9H0H9 118 aa1.99□□□□□ -2.09
CLK1-203ENST00000409769 KRTAP19-2Q3LHN2 52 aa1.98□□□□□ -2.09
CLK1-203ENST00000409769 C1orf64Q8NEQ6 169 aa1.98□□□□□ -2.09
CLK1-203ENST00000409769 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
CLK1-203ENST00000409769 CCDC179H3BU77 68 aa1.97□□□□□ -2.09
CLK1-203ENST00000409769 C20orf197Q8N268 126 aa1.97□□□□□ -2.09
CLK1-203ENST00000409769 CYSTM1Q9H1C7 97 aa1.97□□□□□ -2.09
CLK1-203ENST00000409769 SNURFQ9Y675 71 aa1.97□□□□□ -2.09
CLK1-203ENST00000409769 RNF213Q63HN8 5207 aa1.96□□□□□ -2.09
CLK1-203ENST00000409769 MUC2Q02817 5179 aa1.96□□□□□ -2.1
CLK1-203ENST00000409769 H7BZZ5 65 aa1.95□□□□□ -2.1
CLK1-203ENST00000409769 FLGP20930 4061 aaPredicted RBP1.94□□□□□ -2.1
CLK1-203ENST00000409769 NDUFC1O43677 76 aa1.94□□□□□ -2.1
CLK1-203ENST00000409769 C4orf26Q17RF5 130 aa1.94□□□□□ -2.1
CLK1-203ENST00000409769 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
CLK1-203ENST00000409769 COX6B2Q6YFQ2 88 aa1.94□□□□□ -2.1
CLK1-203ENST00000409769 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
CLK1-203ENST00000409769 DMAC1Q96GE9 116 aa1.93□□□□□ -2.1
CLK1-203ENST00000409769 RBM12B-AS1Q9P1G2 102 aa1.92□□□□□ -2.1
CLK1-203ENST00000409769 A8MUN3 132 aa1.91□□□□□ -2.1
CLK1-203ENST00000409769 TMEM258P61165 79 aa1.9□□□□□ -2.11
CLK1-203ENST00000409769 H1FX-AS1Q4G0G2 97 aa1.9□□□□□ -2.11
CLK1-203ENST00000409769 FAM236DA0A1B0GTK5 79 aa1.89□□□□□ -2.11
CLK1-203ENST00000409769 FAM236CP0DP71 79 aa1.89□□□□□ -2.11
CLK1-203ENST00000409769 ATP5EP56381 51 aaPredicted RBP1.89□□□□□ -2.11
CLK1-203ENST00000409769 MT1HP80294 61 aa1.89□□□□□ -2.11
CLK1-203ENST00000409769 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
CLK1-203ENST00000409769 P0C880 135 aa1.88□□□□□ -2.11
CLK1-203ENST00000409769 ACYP2P14621 99 aa1.88□□□□□ -2.11
CLK1-203ENST00000409769 LCA10Q71F78 164 aa1.88□□□□□ -2.11
CLK1-203ENST00000409769 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
CLK1-203ENST00000409769 COA5Q86WW8 74 aa1.87□□□□□ -2.11
CLK1-203ENST00000409769 S4R3F8 94 aa1.87□□□□□ -2.11
CLK1-203ENST00000409769 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
CLK1-203ENST00000409769 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
CLK1-203ENST00000409769 CSAG1Q6PB30 78 aa1.83□□□□□ -2.12
CLK1-203ENST00000409769 SERP1Q9Y6X1 66 aa1.83□□□□□ -2.12
CLK1-203ENST00000409769 H0YAA0 97 aa1.82□□□□□ -2.12
CLK1-203ENST00000409769 RPS28P62857 69 aaKnown RBP1.82□□□□□ -2.12
CLK1-203ENST00000409769 SMIM26A0A096LP01 95 aa1.81□□□□□ -2.12
CLK1-203ENST00000409769 M0R2T5 61 aa1.81□□□□□ -2.12
CLK1-203ENST00000409769 SPTSSBQ8NFR3 76 aa1.81□□□□□ -2.12
CLK1-203ENST00000409769 MT2AP02795 61 aa1.8□□□□□ -2.12
CLK1-203ENST00000409769 MT1FP04733 61 aa1.79□□□□□ -2.12
CLK1-203ENST00000409769 LINC01558Q9Y6Z2 57 aa1.78□□□□□ -2.12
CLK1-203ENST00000409769 Q1T7F1 81 aa1.77□□□□□ -2.13
CLK1-203ENST00000409769 ADM2Q7Z4H4 148 aa1.77□□□□□ -2.13
CLK1-203ENST00000409769 A0A1B0GU69 56 aa1.75□□□□□ -2.13
CLK1-203ENST00000409769 LUZP6Q538Z0 58 aa1.75□□□□□ -2.13
CLK1-203ENST00000409769 CRIPTQ9P021 101 aa1.75□□□□□ -2.13
CLK1-203ENST00000409769 V9GYY9 64 aa1.75□□□□□ -2.13
CLK1-203ENST00000409769 SPRR2GQ9BYE4 73 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms