RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 V9GYY9 64 aa4.38□□□□□ -1.71
NIF3L1-203ENST00000409129 NREPQ16612 68 aa4.37□□□□□ -1.71
NIF3L1-203ENST00000409129 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
NIF3L1-203ENST00000409129 A0A1B0GW54 56 aa4.35□□□□□ -1.71
NIF3L1-203ENST00000409129 ACYP1P07311 99 aa4.35□□□□□ -1.71
NIF3L1-203ENST00000409129 COX7CP15954 63 aa4.35□□□□□ -1.71
NIF3L1-203ENST00000409129 IGKV3D-7A0A0C4DH55 119 aa4.34□□□□□ -1.71
NIF3L1-203ENST00000409129 Q6ZVQ6 151 aa4.33□□□□□ -1.72
NIF3L1-203ENST00000409129 FAM236AA0A1B0GUQ0 79 aa4.32□□□□□ -1.72
NIF3L1-203ENST00000409129 FAM236BA0A1B0GV22 79 aa4.32□□□□□ -1.72
NIF3L1-203ENST00000409129 K7EQZ3 153 aa4.32□□□□□ -1.72
NIF3L1-203ENST00000409129 ATOX1O00244 68 aa4.32□□□□□ -1.72
NIF3L1-203ENST00000409129 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
NIF3L1-203ENST00000409129 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
NIF3L1-203ENST00000409129 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
NIF3L1-203ENST00000409129 BPY2O14599 106 aa4.3□□□□□ -1.72
NIF3L1-203ENST00000409129 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
NIF3L1-203ENST00000409129 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
NIF3L1-203ENST00000409129 Q8N9L7 120 aa4.3□□□□□ -1.72
NIF3L1-203ENST00000409129 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
NIF3L1-203ENST00000409129 KMT2DO14686 5537 aa4.29□□□□□ -1.72
NIF3L1-203ENST00000409129 TMEM254Q8TBM7 123 aa4.28□□□□□ -1.72
NIF3L1-203ENST00000409129 MRPL34Q9BQ48 92 aaKnown RBP4.28□□□□□ -1.72
NIF3L1-203ENST00000409129 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
NIF3L1-203ENST00000409129 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
NIF3L1-203ENST00000409129 UBL5Q9BZL1 73 aa4.27□□□□□ -1.73
NIF3L1-203ENST00000409129 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
NIF3L1-203ENST00000409129 NDUFS5O43920 106 aa4.25□□□□□ -1.73
NIF3L1-203ENST00000409129 HIST1H4AP62805 103 aaKnown RBP4.25□□□□□ -1.73
NIF3L1-203ENST00000409129 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
NIF3L1-203ENST00000409129 SERP2Q8N6R1 65 aa4.25□□□□□ -1.73
NIF3L1-203ENST00000409129 SERP1Q9Y6X1 66 aa4.25□□□□□ -1.73
NIF3L1-203ENST00000409129 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
NIF3L1-203ENST00000409129 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
NIF3L1-203ENST00000409129 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
NIF3L1-203ENST00000409129 CASC2Q6XLA1 102 aa4.22□□□□□ -1.73
NIF3L1-203ENST00000409129 Q5W150 140 aa4.21□□□□□ -1.74
NIF3L1-203ENST00000409129 C7orf65Q6ZTY9 151 aa4.21□□□□□ -1.74
NIF3L1-203ENST00000409129 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
NIF3L1-203ENST00000409129 ATP5EP56381 51 aaPredicted RBP4.18□□□□□ -1.74
NIF3L1-203ENST00000409129 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
NIF3L1-203ENST00000409129 A6NN06 94 aa4.16□□□□□ -1.74
NIF3L1-203ENST00000409129 CXCL6P80162 114 aa4.16□□□□□ -1.74
NIF3L1-203ENST00000409129 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
NIF3L1-203ENST00000409129 NDUFC1O43677 76 aa4.14□□□□□ -1.75
NIF3L1-203ENST00000409129 MT1BP07438 61 aa4.14□□□□□ -1.75
NIF3L1-203ENST00000409129 ATP5EP2Q5VTU8 51 aa4.13□□□□□ -1.75
NIF3L1-203ENST00000409129 Q5VV11 94 aa4.13□□□□□ -1.75
NIF3L1-203ENST00000409129 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
NIF3L1-203ENST00000409129 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
NIF3L1-203ENST00000409129 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
NIF3L1-203ENST00000409129 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
NIF3L1-203ENST00000409129 S4R3F8 94 aa4.11□□□□□ -1.75
NIF3L1-203ENST00000409129 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
NIF3L1-203ENST00000409129 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
NIF3L1-203ENST00000409129 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
NIF3L1-203ENST00000409129 TRAV7A0A075B6U4 112 aa4.09□□□□□ -1.75
NIF3L1-203ENST00000409129 A0A087WVE0 104 aa4.09□□□□□ -1.75
NIF3L1-203ENST00000409129 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
NIF3L1-203ENST00000409129 H7BZZ5 65 aa4.08□□□□□ -1.76
NIF3L1-203ENST00000409129 KLKP1Q107X0 134 aa4.08□□□□□ -1.76
NIF3L1-203ENST00000409129 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
NIF3L1-203ENST00000409129 LCA10Q71F78 164 aa4.08□□□□□ -1.76
NIF3L1-203ENST00000409129 C1orf64Q8NEQ6 169 aa4.08□□□□□ -1.76
NIF3L1-203ENST00000409129 SPRR2EP22531 72 aa4.07□□□□□ -1.76
NIF3L1-203ENST00000409129 SPRR2BP35325 72 aa4.07□□□□□ -1.76
NIF3L1-203ENST00000409129 SPRR2AP35326 72 aa4.07□□□□□ -1.76
NIF3L1-203ENST00000409129 C20orf197Q8N268 126 aa4.07□□□□□ -1.76
NIF3L1-203ENST00000409129 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
NIF3L1-203ENST00000409129 TRAV22A0A0B4J277 110 aa4.03□□□□□ -1.76
NIF3L1-203ENST00000409129 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
NIF3L1-203ENST00000409129 H0Y9P7 68 aa4□□□□□ -1.77
NIF3L1-203ENST00000409129 Q1T7F1 81 aa3.99□□□□□ -1.77
NIF3L1-203ENST00000409129 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
NIF3L1-203ENST00000409129 CYP4F30PQ9H0H9 118 aa3.99□□□□□ -1.77
NIF3L1-203ENST00000409129 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
NIF3L1-203ENST00000409129 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
NIF3L1-203ENST00000409129 OCR1Q9BZK8 76 aa3.95□□□□□ -1.78
NIF3L1-203ENST00000409129 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
NIF3L1-203ENST00000409129 SPRR2DP22532 72 aa3.94□□□□□ -1.78
NIF3L1-203ENST00000409129 LINC00208Q96KT6 92 aa3.94□□□□□ -1.78
NIF3L1-203ENST00000409129 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
NIF3L1-203ENST00000409129 MP68P56378 58 aa3.92□□□□□ -1.78
NIF3L1-203ENST00000409129 H0YAA0 97 aa3.89□□□□□ -1.79
NIF3L1-203ENST00000409129 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
NIF3L1-203ENST00000409129 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
NIF3L1-203ENST00000409129 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
NIF3L1-203ENST00000409129 A8MUN3 132 aa3.85□□□□□ -1.79
NIF3L1-203ENST00000409129 MT1XP80297 61 aa3.85□□□□□ -1.79
NIF3L1-203ENST00000409129 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
NIF3L1-203ENST00000409129 H3BPC8 53 aa3.84□□□□□ -1.79
NIF3L1-203ENST00000409129 PSPHP1O15172 72 aa3.83□□□□□ -1.8
NIF3L1-203ENST00000409129 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
NIF3L1-203ENST00000409129 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
NIF3L1-203ENST00000409129 CHKB-CPT1BH3BT56 60 aa3.8□□□□□ -1.8
NIF3L1-203ENST00000409129 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
NIF3L1-203ENST00000409129 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
NIF3L1-203ENST00000409129 SPTSSBQ8NFR3 76 aa3.79□□□□□ -1.8
NIF3L1-203ENST00000409129 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
NIF3L1-203ENST00000409129 MT3P25713 68 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 807.4 ms