RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 LRP1Q07954 4544 aaKnown RBP2.15□□□□□ -2.07
FNDC3A-202ENST00000398316 P0C880 135 aa2.15□□□□□ -2.07
FNDC3A-202ENST00000398316 HERC1Q15751 4861 aa2.15□□□□□ -2.07
FNDC3A-202ENST00000398316 OCR1Q9BZK8 76 aa2.14□□□□□ -2.07
FNDC3A-202ENST00000398316 Q8N377 158 aa2.14□□□□□ -2.07
FNDC3A-202ENST00000398316 LINC01558Q9Y6Z2 57 aa2.14□□□□□ -2.07
FNDC3A-202ENST00000398316 DMAC1Q96GE9 116 aa2.14□□□□□ -2.07
FNDC3A-202ENST00000398316 FAM168BA1KXE4 195 aa2.13□□□□□ -2.07
FNDC3A-202ENST00000398316 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
FNDC3A-202ENST00000398316 FLGP20930 4061 aaPredicted RBP2.13□□□□□ -2.07
FNDC3A-202ENST00000398316 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
FNDC3A-202ENST00000398316 K7EQZ3 153 aa2.11□□□□□ -2.07
FNDC3A-202ENST00000398316 A0A1W2PNM2 257 aa2.11□□□□□ -2.07
FNDC3A-202ENST00000398316 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
FNDC3A-202ENST00000398316 C20orf166-AS1Q96NR2 134 aa2.1□□□□□ -2.07
FNDC3A-202ENST00000398316 LINC00472Q9H8W2 130 aa2.1□□□□□ -2.07
FNDC3A-202ENST00000398316 S4R3F8 94 aa2.1□□□□□ -2.07
FNDC3A-202ENST00000398316 TPRXLQ17RH7 258 aa2.1□□□□□ -2.07
FNDC3A-202ENST00000398316 KRTAP25-1Q3LHN0 102 aa2.09□□□□□ -2.07
FNDC3A-202ENST00000398316 XP32Q5T750 250 aa2.09□□□□□ -2.08
FNDC3A-202ENST00000398316 KRTAP13-3Q3SY46 172 aa2.09□□□□□ -2.08
FNDC3A-202ENST00000398316 DSCR10P59022 87 aa2.08□□□□□ -2.08
FNDC3A-202ENST00000398316 A0A0D9SG42 100 aa2.08□□□□□ -2.08
FNDC3A-202ENST00000398316 SPANXA2-OT1Q8N9U9 137 aa2.08□□□□□ -2.08
FNDC3A-202ENST00000398316 R4GN34 69 aa2.08□□□□□ -2.08
FNDC3A-202ENST00000398316 MRPL34Q9BQ48 92 aaKnown RBP2.08□□□□□ -2.08
FNDC3A-202ENST00000398316 KRTAP19-2Q3LHN2 52 aa2.07□□□□□ -2.08
FNDC3A-202ENST00000398316 ANAPC11Q9NYG5 84 aa2.07□□□□□ -2.08
FNDC3A-202ENST00000398316 IGFL1Q6UW32 110 aa2.06□□□□□ -2.08
FNDC3A-202ENST00000398316 A8MUU9 505 aa2.06□□□□□ -2.08
FNDC3A-202ENST00000398316 A0A087X002 238 aa2.05□□□□□ -2.08
FNDC3A-202ENST00000398316 LRP2P98164 4655 aa2.05□□□□□ -2.08
FNDC3A-202ENST00000398316 A0A0G2JQZ4 141 aa2.02□□□□□ -2.09
FNDC3A-202ENST00000398316 A0A1B0GVX0 72 aa2.02□□□□□ -2.09
FNDC3A-202ENST00000398316 M0QZ58 72 aa2□□□□□ -2.09
FNDC3A-202ENST00000398316 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
FNDC3A-202ENST00000398316 Q5W150 140 aa2□□□□□ -2.09
FNDC3A-202ENST00000398316 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
FNDC3A-202ENST00000398316 MMP24-AS1A0A0U1RRL7 71 aa1.99□□□□□ -2.09
FNDC3A-202ENST00000398316 ZCCHC13Q8WW36 166 aaKnown RBP1.99□□□□□ -2.09
FNDC3A-202ENST00000398316 RPL37P61927 97 aaKnown RBP1.98□□□□□ -2.09
FNDC3A-202ENST00000398316 A0A1B0GU33 70 aa1.98□□□□□ -2.09
FNDC3A-202ENST00000398316 NOTCH2NLQ7Z3S9 236 aa1.96□□□□□ -2.09
FNDC3A-202ENST00000398316 KRTAP9-6A0A140TA67 174 aa1.95□□□□□ -2.1
FNDC3A-202ENST00000398316 LCE2CQ5TA81 110 aa1.94□□□□□ -2.1
FNDC3A-202ENST00000398316 KRTAP9-2Q9BYQ4 174 aa1.94□□□□□ -2.1
FNDC3A-202ENST00000398316 LCE2AQ5TA79 106 aaPredicted RBP1.93□□□□□ -2.1
FNDC3A-202ENST00000398316 C10orf95Q9H7T3 257 aa1.93□□□□□ -2.1
FNDC3A-202ENST00000398316 H0YAA0 97 aa1.92□□□□□ -2.1
FNDC3A-202ENST00000398316 TNP1P09430 55 aa1.9□□□□□ -2.1
FNDC3A-202ENST00000398316 UBR4Q5T4S7 5183 aa1.9□□□□□ -2.1
FNDC3A-202ENST00000398316 RNF213Q63HN8 5207 aa1.89□□□□□ -2.11
FNDC3A-202ENST00000398316 KRTAP10-10P60014 251 aa1.88□□□□□ -2.11
FNDC3A-202ENST00000398316 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
FNDC3A-202ENST00000398316 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.87□□□□□ -2.11
FNDC3A-202ENST00000398316 LPAP08519 4548 aa1.87□□□□□ -2.11
FNDC3A-202ENST00000398316 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
FNDC3A-202ENST00000398316 KRTAP23-1A1A580 65 aa1.84□□□□□ -2.11
FNDC3A-202ENST00000398316 KRTAP3-1Q9BYR8 98 aa1.84□□□□□ -2.12
FNDC3A-202ENST00000398316 CRCT1Q9UGL9 99 aa1.83□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
FNDC3A-202ENST00000398316 FSIP2Q5CZC0 6907 aa1.82□□□□□ -2.12
FNDC3A-202ENST00000398316 LORP23490 312 aaPredicted RBP1.82□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP3-3Q9BYR6 98 aa1.82□□□□□ -2.12
FNDC3A-202ENST00000398316 MT1HP80294 61 aa1.81□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP15-1Q3LI76 137 aa1.8□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP4-8Q9BYQ9 185 aa1.8□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP9-8Q9BYQ0 159 aa1.8□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP19-8Q3LI54 63 aa1.79□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP4-2Q9BYR5 136 aa1.79□□□□□ -2.12
FNDC3A-202ENST00000398316 PP632Q6XCG6 107 aa1.78□□□□□ -2.12
FNDC3A-202ENST00000398316 SPRR2GQ9BYE4 73 aa1.78□□□□□ -2.12
FNDC3A-202ENST00000398316 KRTAP10-6P60371 365 aaPredicted RBP1.76□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP9-7A8MTY7 169 aa1.75□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP9-3Q9BYQ3 159 aa1.75□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP3-2Q9BYR7 98 aa1.75□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP9-9Q9BYP9 154 aa1.72□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP9-4Q9BYQ2 154 aa1.72□□□□□ -2.13
FNDC3A-202ENST00000398316 MT2AP02795 61 aa1.72□□□□□ -2.13
FNDC3A-202ENST00000398316 KRTAP19-1Q8IUB9 90 aa1.7□□□□□ -2.14
FNDC3A-202ENST00000398316 KRTAP19-6Q3LI70 58 aa1.7□□□□□ -2.14
FNDC3A-202ENST00000398316 KRTAP12-2P59991 146 aa1.68□□□□□ -2.14
FNDC3A-202ENST00000398316 MT1FP04733 61 aa1.67□□□□□ -2.14
FNDC3A-202ENST00000398316 INE1O15225 51 aa1.67□□□□□ -2.14
FNDC3A-202ENST00000398316 USH2AO75445 5202 aa1.67□□□□□ -2.14
FNDC3A-202ENST00000398316 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
FNDC3A-202ENST00000398316 MT1BP07438 61 aa1.65□□□□□ -2.15
FNDC3A-202ENST00000398316 KRTAP19-4Q3LI73 84 aa1.65□□□□□ -2.15
FNDC3A-202ENST00000398316 KRTAP4-8A0A0G2JLE6 195 aa1.65□□□□□ -2.15
FNDC3A-202ENST00000398316 LCE2BO14633 110 aa1.63□□□□□ -2.15
FNDC3A-202ENST00000398316 KRTAP4-7Q9BYR0 210 aa1.62□□□□□ -2.15
FNDC3A-202ENST00000398316 MUC2Q02817 5179 aa1.62□□□□□ -2.15
FNDC3A-202ENST00000398316 KRTAP10-5P60370 271 aa1.62□□□□□ -2.15
FNDC3A-202ENST00000398316 KRTAP10-12P60413 245 aa1.6□□□□□ -2.15
FNDC3A-202ENST00000398316 KRTAP5-9P26371 169 aa1.58□□□□□ -2.16
FNDC3A-202ENST00000398316 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
FNDC3A-202ENST00000398316 KRTAP10-7P60409 375 aaPredicted RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms