RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 TYMSOSQ8TAI1 123 aa5.82□□□□□ -1.48
TUBB-208ENST00000396389 SPINK1P00995 79 aa5.82□□□□□ -1.48
TUBB-208ENST00000396389 UQCR11O14957 56 aa5.81□□□□□ -1.48
TUBB-208ENST00000396389 TNXBP22105 4242 aa5.81□□□□□ -1.48
TUBB-208ENST00000396389 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
TUBB-208ENST00000396389 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
TUBB-208ENST00000396389 P0C880 135 aa5.8□□□□□ -1.48
TUBB-208ENST00000396389 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
TUBB-208ENST00000396389 MT1HL1P0DM35 61 aa5.71□□□□□ -1.5
TUBB-208ENST00000396389 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
TUBB-208ENST00000396389 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
TUBB-208ENST00000396389 LPAP08519 4548 aa5.69□□□□□ -1.5
TUBB-208ENST00000396389 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
TUBB-208ENST00000396389 SSBP3-AS1Q7Z2R9 100 aa5.68□□□□□ -1.5
TUBB-208ENST00000396389 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.51
TUBB-208ENST00000396389 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
TUBB-208ENST00000396389 LRP2P98164 4655 aa5.63□□□□□ -1.51
TUBB-208ENST00000396389 H0YAA0 97 aa5.63□□□□□ -1.51
TUBB-208ENST00000396389 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
TUBB-208ENST00000396389 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
TUBB-208ENST00000396389 K7ERS5 55 aa5.6□□□□□ -1.51
TUBB-208ENST00000396389 A8MUU9 505 aa5.58□□□□□ -1.52
TUBB-208ENST00000396389 MUC2Q02817 5179 aa5.58□□□□□ -1.52
TUBB-208ENST00000396389 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
TUBB-208ENST00000396389 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
TUBB-208ENST00000396389 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
TUBB-208ENST00000396389 A0A1B0GU33 70 aa5.52□□□□□ -1.53
TUBB-208ENST00000396389 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
TUBB-208ENST00000396389 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
TUBB-208ENST00000396389 RPS29P62273 56 aaKnown RBP5.44□□□□□ -1.54
TUBB-208ENST00000396389 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
TUBB-208ENST00000396389 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
TUBB-208ENST00000396389 A0A0D9SG42 100 aa5.38□□□□□ -1.55
TUBB-208ENST00000396389 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
TUBB-208ENST00000396389 XP32Q5T750 250 aa5.37□□□□□ -1.55
TUBB-208ENST00000396389 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
TUBB-208ENST00000396389 TPRXLQ17RH7 258 aa5.34□□□□□ -1.56
TUBB-208ENST00000396389 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
TUBB-208ENST00000396389 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
TUBB-208ENST00000396389 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
TUBB-208ENST00000396389 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
TUBB-208ENST00000396389 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
TUBB-208ENST00000396389 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.57
TUBB-208ENST00000396389 KRTAP3-3Q9BYR6 98 aa5.2□□□□□ -1.58
TUBB-208ENST00000396389 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
TUBB-208ENST00000396389 MUC17Q685J3 4493 aa5.15□□□□□ -1.58
TUBB-208ENST00000396389 KRTAP12-2P59991 146 aa5.15□□□□□ -1.58
TUBB-208ENST00000396389 S4R3F8 94 aa5.12□□□□□ -1.59
TUBB-208ENST00000396389 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
TUBB-208ENST00000396389 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
TUBB-208ENST00000396389 M0R2T5 61 aa4.93□□□□□ -1.62
TUBB-208ENST00000396389 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
TUBB-208ENST00000396389 LCE2CQ5TA81 110 aa4.9□□□□□ -1.62
TUBB-208ENST00000396389 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
TUBB-208ENST00000396389 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
TUBB-208ENST00000396389 MT1HP80294 61 aa4.85□□□□□ -1.63
TUBB-208ENST00000396389 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
TUBB-208ENST00000396389 M0QZ58 72 aa4.83□□□□□ -1.64
TUBB-208ENST00000396389 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
TUBB-208ENST00000396389 R4GN34 69 aa4.79□□□□□ -1.64
TUBB-208ENST00000396389 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
TUBB-208ENST00000396389 USH2AO75445 5202 aa4.72□□□□□ -1.65
TUBB-208ENST00000396389 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
TUBB-208ENST00000396389 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
TUBB-208ENST00000396389 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
TUBB-208ENST00000396389 MT1FP04733 61 aa4.62□□□□□ -1.67
TUBB-208ENST00000396389 MT2AP02795 61 aa4.61□□□□□ -1.67
TUBB-208ENST00000396389 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
TUBB-208ENST00000396389 INE1O15225 51 aa4.52□□□□□ -1.69
TUBB-208ENST00000396389 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
TUBB-208ENST00000396389 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
TUBB-208ENST00000396389 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
TUBB-208ENST00000396389 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
TUBB-208ENST00000396389 LCE2BO14633 110 aa4.42□□□□□ -1.7
TUBB-208ENST00000396389 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
TUBB-208ENST00000396389 TNP1P09430 55 aa4.36□□□□□ -1.71
TUBB-208ENST00000396389 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
TUBB-208ENST00000396389 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
TUBB-208ENST00000396389 MT1BP07438 61 aa4.28□□□□□ -1.72
TUBB-208ENST00000396389 KMT2DO14686 5537 aa4.27□□□□□ -1.73
TUBB-208ENST00000396389 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
TUBB-208ENST00000396389 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
TUBB-208ENST00000396389 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
TUBB-208ENST00000396389 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
TUBB-208ENST00000396389 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
TUBB-208ENST00000396389 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
TUBB-208ENST00000396389 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
TUBB-208ENST00000396389 MT1XP80297 61 aa4.11□□□□□ -1.75
TUBB-208ENST00000396389 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
TUBB-208ENST00000396389 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
TUBB-208ENST00000396389 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
TUBB-208ENST00000396389 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
TUBB-208ENST00000396389 KRTAP4-8Q9BYQ9 185 aa3.98□□□□□ -1.77
TUBB-208ENST00000396389 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
TUBB-208ENST00000396389 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
TUBB-208ENST00000396389 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
TUBB-208ENST00000396389 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
TUBB-208ENST00000396389 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
TUBB-208ENST00000396389 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
TUBB-208ENST00000396389 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms