RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PDE6GP18545 87 aa3.4□□□□□ -1.87
H3F3A-201ENST00000366813 LINC00158P58513 81 aa3.4□□□□□ -1.87
H3F3A-201ENST00000366813 IGFL1Q6UW32 110 aa3.4□□□□□ -1.87
H3F3A-201ENST00000366813 OR13C6PQ8NH95 151 aa3.4□□□□□ -1.87
H3F3A-201ENST00000366813 C14orf132Q9NPU4 83 aa3.4□□□□□ -1.87
H3F3A-201ENST00000366813 LIMD2Q9BT23 127 aa3.39□□□□□ -1.87
H3F3A-201ENST00000366813 ATP11AUNQ6ZP68 121 aa3.38□□□□□ -1.87
H3F3A-201ENST00000366813 Q8NDZ9 215 aa3.38□□□□□ -1.87
H3F3A-201ENST00000366813 TRBV7-6A0A0J9YX20 115 aa3.37□□□□□ -1.87
H3F3A-201ENST00000366813 NCR3O14931 201 aa3.37□□□□□ -1.87
H3F3A-201ENST00000366813 ERC2-IT1O76042 136 aa3.37□□□□□ -1.87
H3F3A-201ENST00000366813 KLKP1Q107X0 134 aa3.37□□□□□ -1.87
H3F3A-201ENST00000366813 LINC00575Q6W349 94 aa3.37□□□□□ -1.87
H3F3A-201ENST00000366813 Q6ZQT0 140 aa3.37□□□□□ -1.87
H3F3A-201ENST00000366813 CYSTM1Q9H1C7 97 aa3.37□□□□□ -1.87
H3F3A-201ENST00000366813 TRAV7A0A075B6U4 112 aa3.36□□□□□ -1.87
H3F3A-201ENST00000366813 IGKV3D-7A0A0C4DH55 119 aa3.36□□□□□ -1.87
H3F3A-201ENST00000366813 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
H3F3A-201ENST00000366813 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
H3F3A-201ENST00000366813 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
H3F3A-201ENST00000366813 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
H3F3A-201ENST00000366813 A0A087WVE0 104 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 TRBV7-4A0A0J9YYF1 115 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 NDUFC1O43677 76 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 PFN2P35080 140 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 RBM3P98179 157 aaKnown RBP3.34□□□□□ -1.87
H3F3A-201ENST00000366813 C1orf195Q5TG92 126 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 Q5XG85 94 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.34□□□□□ -1.87
H3F3A-201ENST00000366813 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
H3F3A-201ENST00000366813 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.88
H3F3A-201ENST00000366813 A0A1B0GW54 56 aa3.33□□□□□ -1.88
H3F3A-201ENST00000366813 H7BZZ5 65 aa3.33□□□□□ -1.88
H3F3A-201ENST00000366813 SPRR2DP22532 72 aa3.32□□□□□ -1.88
H3F3A-201ENST00000366813 C6orf99Q4VX62 202 aa3.32□□□□□ -1.88
H3F3A-201ENST00000366813 C8orf17Q9NRJ1 99 aa3.32□□□□□ -1.88
H3F3A-201ENST00000366813 ETDCA0A1B0GVM5 59 aa3.31□□□□□ -1.88
H3F3A-201ENST00000366813 DSCR8Q96T75 97 aa3.31□□□□□ -1.88
H3F3A-201ENST00000366813 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
H3F3A-201ENST00000366813 SPRR1AP35321 89 aa3.3□□□□□ -1.88
H3F3A-201ENST00000366813 ELOF1P60002 83 aaKnown RBP3.3□□□□□ -1.88
H3F3A-201ENST00000366813 TRAV23DV6A0A075B6W5 121 aa3.29□□□□□ -1.88
H3F3A-201ENST00000366813 C20orf197Q8N268 126 aa3.29□□□□□ -1.88
H3F3A-201ENST00000366813 A8MUU9 505 aa3.28□□□□□ -1.88
H3F3A-201ENST00000366813 COX7BP24311 80 aa3.28□□□□□ -1.88
H3F3A-201ENST00000366813 Q6ZQY7 126 aa3.28□□□□□ -1.88
H3F3A-201ENST00000366813 Q9BRP9 147 aa3.28□□□□□ -1.88
H3F3A-201ENST00000366813 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
H3F3A-201ENST00000366813 ZNF73O43830 326 aaPredicted RBP3.27□□□□□ -1.89
H3F3A-201ENST00000366813 C4orf26Q17RF5 130 aa3.27□□□□□ -1.89
H3F3A-201ENST00000366813 ST20-AS1Q8NBB2 130 aa3.27□□□□□ -1.89
H3F3A-201ENST00000366813 LAMTOR3Q9UHA4 124 aa3.27□□□□□ -1.89
H3F3A-201ENST00000366813 IGLV5-48A0A075B6I7 105 aa3.26□□□□□ -1.89
H3F3A-201ENST00000366813 KCNQ1DNQ9H478 68 aa3.26□□□□□ -1.89
H3F3A-201ENST00000366813 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
H3F3A-201ENST00000366813 NREPQ16612 68 aa3.25□□□□□ -1.89
H3F3A-201ENST00000366813 IGKV4-1P06312 121 aa3.24□□□□□ -1.89
H3F3A-201ENST00000366813 TMEM254Q8TBM7 123 aa3.24□□□□□ -1.89
H3F3A-201ENST00000366813 A8MWP4 228 aa3.23□□□□□ -1.89
H3F3A-201ENST00000366813 F8WEM9 126 aa3.23□□□□□ -1.89
H3F3A-201ENST00000366813 SPANXA2-OT1Q8N9U9 137 aa3.23□□□□□ -1.89
H3F3A-201ENST00000366813 RBM12B-AS1Q9P1G2 102 aa3.23□□□□□ -1.89
H3F3A-201ENST00000366813 MT1BP07438 61 aa3.22□□□□□ -1.89
H3F3A-201ENST00000366813 CD164Q04900 197 aa3.22□□□□□ -1.89
H3F3A-201ENST00000366813 HRES1P13985 223 aa3.21□□□□□ -1.89
H3F3A-201ENST00000366813 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.89
H3F3A-201ENST00000366813 Q6ZRX8 168 aa3.21□□□□□ -1.89
H3F3A-201ENST00000366813 ZCCHC13Q8WW36 166 aaKnown RBP3.21□□□□□ -1.89
H3F3A-201ENST00000366813 Q96NJ1 140 aa3.2□□□□□ -1.9
H3F3A-201ENST00000366813 SNURFQ9Y675 71 aa3.2□□□□□ -1.9
H3F3A-201ENST00000366813 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
H3F3A-201ENST00000366813 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
H3F3A-201ENST00000366813 Q1T7F1 81 aa3.19□□□□□ -1.9
H3F3A-201ENST00000366813 A0A1W2PNM2 257 aa3.18□□□□□ -1.9
H3F3A-201ENST00000366813 hDV103S1A0JD37 113 aa3.18□□□□□ -1.9
H3F3A-201ENST00000366813 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
H3F3A-201ENST00000366813 SPRR1BP22528 89 aa3.17□□□□□ -1.9
H3F3A-201ENST00000366813 H3BPC8 53 aa3.16□□□□□ -1.9
H3F3A-201ENST00000366813 NDUFB1O75438 58 aa3.16□□□□□ -1.9
H3F3A-201ENST00000366813 Q5VV11 94 aa3.15□□□□□ -1.91
H3F3A-201ENST00000366813 PRR15Q8IV56 129 aa3.15□□□□□ -1.91
H3F3A-201ENST00000366813 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
H3F3A-201ENST00000366813 V9GYY9 64 aa3.14□□□□□ -1.91
H3F3A-201ENST00000366813 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
H3F3A-201ENST00000366813 HCG22E2RYF7 251 aa3.13□□□□□ -1.91
H3F3A-201ENST00000366813 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
H3F3A-201ENST00000366813 C1orf64Q8NEQ6 169 aa3.12□□□□□ -1.91
H3F3A-201ENST00000366813 K7EQZ3 153 aa3.11□□□□□ -1.91
H3F3A-201ENST00000366813 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
H3F3A-201ENST00000366813 DEFB105AQ8NG35 78 aa3.11□□□□□ -1.91
H3F3A-201ENST00000366813 TRAV22A0A0B4J277 110 aa3.1□□□□□ -1.91
H3F3A-201ENST00000366813 PSPHP1O15172 72 aa3.1□□□□□ -1.91
H3F3A-201ENST00000366813 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
H3F3A-201ENST00000366813 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
H3F3A-201ENST00000366813 MP68P56378 58 aa3.09□□□□□ -1.91
H3F3A-201ENST00000366813 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
H3F3A-201ENST00000366813 LINC00472Q9H8W2 130 aa3.08□□□□□ -1.92
H3F3A-201ENST00000366813 LOC101927531A0A1B0GV80 90 aa3.07□□□□□ -1.92
H3F3A-201ENST00000366813 A0A087WSZ3 146 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms