RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 A6NN06 94 aa2.14□□□□□ -2.07
LIG4-201ENST00000356922 MP68P56378 58 aa2.14□□□□□ -2.07
LIG4-201ENST00000356922 IGKV2D-30A0A075B6S6 120 aa2.14□□□□□ -2.07
LIG4-201ENST00000356922 MMP24-AS1A0A0U1RRL7 71 aa2.14□□□□□ -2.07
LIG4-201ENST00000356922 A8MU10 97 aa2.14□□□□□ -2.07
LIG4-201ENST00000356922 IGKV2-30P06310 120 aa2.14□□□□□ -2.07
LIG4-201ENST00000356922 OCR1Q9BZK8 76 aa2.14□□□□□ -2.07
LIG4-201ENST00000356922 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
LIG4-201ENST00000356922 A8MUU9 505 aa2.12□□□□□ -2.07
LIG4-201ENST00000356922 LINC00208Q96KT6 92 aa2.12□□□□□ -2.07
LIG4-201ENST00000356922 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
LIG4-201ENST00000356922 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
LIG4-201ENST00000356922 Q75L30 129 aa2.12□□□□□ -2.07
LIG4-201ENST00000356922 Q5W150 140 aa2.12□□□□□ -2.07
LIG4-201ENST00000356922 FLGP20930 4061 aaPredicted RBP2.11□□□□□ -2.07
LIG4-201ENST00000356922 Q8N9P0 234 aaPredicted RBP2.11□□□□□ -2.07
LIG4-201ENST00000356922 LOC101927531A0A1B0GV80 90 aa2.11□□□□□ -2.07
LIG4-201ENST00000356922 KRTAP19-2Q3LHN2 52 aa2.11□□□□□ -2.07
LIG4-201ENST00000356922 ZCCHC13Q8WW36 166 aaKnown RBP2.11□□□□□ -2.07
LIG4-201ENST00000356922 TP53AIP1Q9HCN2 124 aa2.11□□□□□ -2.07
LIG4-201ENST00000356922 PRAC1Q96KF2 57 aa2.1□□□□□ -2.07
LIG4-201ENST00000356922 M0R2T5 61 aa2.09□□□□□ -2.07
LIG4-201ENST00000356922 H0Y9P7 68 aa2.09□□□□□ -2.08
LIG4-201ENST00000356922 SPINK7P58062 85 aa2.09□□□□□ -2.08
LIG4-201ENST00000356922 KRTAP23-1A1A580 65 aa2.07□□□□□ -2.08
LIG4-201ENST00000356922 SPANXA2-OT1Q8N9U9 137 aa2.07□□□□□ -2.08
LIG4-201ENST00000356922 KRTAP19-4Q3LI73 84 aa2.07□□□□□ -2.08
LIG4-201ENST00000356922 COA5Q86WW8 74 aa2.06□□□□□ -2.08
LIG4-201ENST00000356922 H3BPC8 53 aa2.05□□□□□ -2.08
LIG4-201ENST00000356922 HRES1P13985 223 aa2.05□□□□□ -2.08
LIG4-201ENST00000356922 A0A0A0MQY5 61 aa2.05□□□□□ -2.08
LIG4-201ENST00000356922 LINC01558Q9Y6Z2 57 aa2.05□□□□□ -2.08
LIG4-201ENST00000356922 ADM2Q7Z4H4 148 aa2.03□□□□□ -2.08
LIG4-201ENST00000356922 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
LIG4-201ENST00000356922 KRTAP3-1Q9BYR8 98 aa2.02□□□□□ -2.09
LIG4-201ENST00000356922 MT1HP80294 61 aa2.02□□□□□ -2.09
LIG4-201ENST00000356922 CSAG1Q6PB30 78 aa2.02□□□□□ -2.09
LIG4-201ENST00000356922 USH2AO75445 5202 aa2□□□□□ -2.09
LIG4-201ENST00000356922 ROMO1P60602 79 aa1.98□□□□□ -2.09
LIG4-201ENST00000356922 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
LIG4-201ENST00000356922 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
LIG4-201ENST00000356922 S4R3F8 94 aa1.98□□□□□ -2.09
LIG4-201ENST00000356922 A0A1B0GU69 56 aa1.97□□□□□ -2.09
LIG4-201ENST00000356922 UQCR11O14957 56 aa1.97□□□□□ -2.09
LIG4-201ENST00000356922 ACYP2P14621 99 aa1.97□□□□□ -2.09
LIG4-201ENST00000356922 KRTAP4-8Q9BYQ9 185 aa1.96□□□□□ -2.09
LIG4-201ENST00000356922 SPATA8Q6RVD6 105 aa1.96□□□□□ -2.1
LIG4-201ENST00000356922 KRTAP10-6P60371 365 aaPredicted RBP1.95□□□□□ -2.1
LIG4-201ENST00000356922 KRTAP9-8Q9BYQ0 159 aa1.95□□□□□ -2.1
LIG4-201ENST00000356922 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
LIG4-201ENST00000356922 KRTAP10-10P60014 251 aa1.92□□□□□ -2.1
LIG4-201ENST00000356922 MT2AP02795 61 aa1.91□□□□□ -2.1
LIG4-201ENST00000356922 MT1FP04733 61 aa1.91□□□□□ -2.1
LIG4-201ENST00000356922 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
LIG4-201ENST00000356922 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
LIG4-201ENST00000356922 DMAC1Q96GE9 116 aa1.91□□□□□ -2.1
LIG4-201ENST00000356922 K7ERS5 55 aa1.91□□□□□ -2.1
LIG4-201ENST00000356922 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.11
LIG4-201ENST00000356922 NDUFAF8A1L188 74 aa1.89□□□□□ -2.11
LIG4-201ENST00000356922 P0C880 135 aa1.88□□□□□ -2.11
LIG4-201ENST00000356922 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
LIG4-201ENST00000356922 KRTAP9-3Q9BYQ3 159 aa1.87□□□□□ -2.11
LIG4-201ENST00000356922 R4GN34 69 aa1.87□□□□□ -2.11
LIG4-201ENST00000356922 KRTAP9-2Q9BYQ4 174 aa1.86□□□□□ -2.11
LIG4-201ENST00000356922 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.86□□□□□ -2.11
LIG4-201ENST00000356922 KRTAP4-7Q9BYR0 210 aa1.86□□□□□ -2.11
LIG4-201ENST00000356922 KRTAP19-1Q8IUB9 90 aa1.85□□□□□ -2.11
LIG4-201ENST00000356922 M0QZ58 72 aa1.84□□□□□ -2.11
LIG4-201ENST00000356922 CRIPTQ9P021 101 aa1.84□□□□□ -2.11
LIG4-201ENST00000356922 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
LIG4-201ENST00000356922 KRTAP4-8A0A0G2JLE6 195 aa1.83□□□□□ -2.12
LIG4-201ENST00000356922 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
LIG4-201ENST00000356922 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
LIG4-201ENST00000356922 A0A0D9SG42 100 aa1.82□□□□□ -2.12
LIG4-201ENST00000356922 A0A1B0GU33 70 aa1.81□□□□□ -2.12
LIG4-201ENST00000356922 PLAC4Q8WY50 150 aa1.81□□□□□ -2.12
LIG4-201ENST00000356922 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
LIG4-201ENST00000356922 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
LIG4-201ENST00000356922 KMT2DO14686 5537 aa1.79□□□□□ -2.12
LIG4-201ENST00000356922 H0YAA0 97 aa1.79□□□□□ -2.12
LIG4-201ENST00000356922 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
LIG4-201ENST00000356922 MT1BP07438 61 aa1.78□□□□□ -2.12
LIG4-201ENST00000356922 LCE3BQ5TA77 95 aa1.78□□□□□ -2.12
LIG4-201ENST00000356922 CAMK2N1Q7Z7J9 78 aa1.78□□□□□ -2.12
LIG4-201ENST00000356922 KRTAP15-1Q3LI76 137 aa1.78□□□□□ -2.12
LIG4-201ENST00000356922 KRTAP9-9Q9BYP9 154 aa1.77□□□□□ -2.13
LIG4-201ENST00000356922 KRTAP9-4Q9BYQ2 154 aa1.77□□□□□ -2.13
LIG4-201ENST00000356922 KRTAP9-6A0A140TA67 174 aa1.77□□□□□ -2.13
LIG4-201ENST00000356922 KRTAP9-7A8MTY7 169 aa1.77□□□□□ -2.13
LIG4-201ENST00000356922 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
LIG4-201ENST00000356922 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
LIG4-201ENST00000356922 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
LIG4-201ENST00000356922 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
LIG4-201ENST00000356922 LCE4AQ5TA78 99 aa1.75□□□□□ -2.13
LIG4-201ENST00000356922 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
LIG4-201ENST00000356922 KRTAP4-9Q9BYQ8 210 aa1.72□□□□□ -2.13
LIG4-201ENST00000356922 PRO2289Q9P1D8 64 aa1.72□□□□□ -2.13
LIG4-201ENST00000356922 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
LIG4-201ENST00000356922 MT1XP80297 61 aa1.7□□□□□ -2.14
LIG4-201ENST00000356922 KRTAP10-5P60370 271 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms