RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 SPINK7P58062 85 aa8.25□□□□□ -1.09
NPM1-201ENST00000296930 FAM236DA0A1B0GTK5 79 aa8.22□□□□□ -1.09
NPM1-201ENST00000296930 FAM236CP0DP71 79 aa8.22□□□□□ -1.09
NPM1-201ENST00000296930 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
NPM1-201ENST00000296930 RBM12B-AS1Q9P1G2 102 aa8.2□□□□□ -1.1
NPM1-201ENST00000296930 HRES1P13985 223 aa8.18□□□□□ -1.1
NPM1-201ENST00000296930 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
NPM1-201ENST00000296930 H7BZZ5 65 aa8.17□□□□□ -1.1
NPM1-201ENST00000296930 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
NPM1-201ENST00000296930 NDUFC1O43677 76 aa8.15□□□□□ -1.11
NPM1-201ENST00000296930 MT2AP02795 61 aa8.1□□□□□ -1.11
NPM1-201ENST00000296930 C4orf26Q17RF5 130 aa8.09□□□□□ -1.11
NPM1-201ENST00000296930 KRTAP9-9Q9BYP9 154 aa8.07□□□□□ -1.12
NPM1-201ENST00000296930 KRTAP9-4Q9BYQ2 154 aa8.07□□□□□ -1.12
NPM1-201ENST00000296930 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
NPM1-201ENST00000296930 USH2AO75445 5202 aa8.05□□□□□ -1.12
NPM1-201ENST00000296930 MT1FP04733 61 aa8.03□□□□□ -1.12
NPM1-201ENST00000296930 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
NPM1-201ENST00000296930 TMEM258P61165 79 aa8.01□□□□□ -1.13
NPM1-201ENST00000296930 SSPOA2VEC9 5147 aa8.01□□□□□ -1.13
NPM1-201ENST00000296930 KRTAP3-1Q9BYR8 98 aa8□□□□□ -1.13
NPM1-201ENST00000296930 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
NPM1-201ENST00000296930 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
NPM1-201ENST00000296930 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
NPM1-201ENST00000296930 A8MUN3 132 aa7.93□□□□□ -1.14
NPM1-201ENST00000296930 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
NPM1-201ENST00000296930 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
NPM1-201ENST00000296930 ACYP2P14621 99 aa7.87□□□□□ -1.15
NPM1-201ENST00000296930 H1FX-AS1Q4G0G2 97 aa7.87□□□□□ -1.15
NPM1-201ENST00000296930 FCGBPQ9Y6R7 5405 aaPredicted RBP7.86□□□□□ -1.15
NPM1-201ENST00000296930 COA5Q86WW8 74 aa7.82□□□□□ -1.16
NPM1-201ENST00000296930 S4R3F8 94 aa7.76□□□□□ -1.17
NPM1-201ENST00000296930 LCA10Q71F78 164 aa7.76□□□□□ -1.17
NPM1-201ENST00000296930 SERP1Q9Y6X1 66 aa7.76□□□□□ -1.17
NPM1-201ENST00000296930 CHKB-CPT1BH3BT56 60 aa7.73□□□□□ -1.17
NPM1-201ENST00000296930 LCE1DQ5T752 114 aa7.72□□□□□ -1.17
NPM1-201ENST00000296930 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.17
NPM1-201ENST00000296930 KRTAP4-7Q9BYR0 210 aa7.68□□□□□ -1.18
NPM1-201ENST00000296930 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
NPM1-201ENST00000296930 MACF1Q9UPN3 7388 aaKnown RBP7.64□□□□□ -1.19
NPM1-201ENST00000296930 SPTSSBQ8NFR3 76 aa7.61□□□□□ -1.19
NPM1-201ENST00000296930 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
NPM1-201ENST00000296930 SYNE2Q8WXH0 6885 aaKnown RBP7.53□□□□□ -1.2
NPM1-201ENST00000296930 SMIM26A0A096LP01 95 aa7.51□□□□□ -1.21
NPM1-201ENST00000296930 KRTAP4-9Q9BYQ8 210 aa7.5□□□□□ -1.21
NPM1-201ENST00000296930 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
NPM1-201ENST00000296930 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
NPM1-201ENST00000296930 H0YAA0 97 aa7.44□□□□□ -1.22
NPM1-201ENST00000296930 Q1T7F1 81 aa7.43□□□□□ -1.22
NPM1-201ENST00000296930 KRTAP6-3Q3LI67 103 aa7.41□□□□□ -1.22
NPM1-201ENST00000296930 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.23
NPM1-201ENST00000296930 V9GYY9 64 aa7.39□□□□□ -1.23
NPM1-201ENST00000296930 A0A1B0GU69 56 aa7.38□□□□□ -1.23
NPM1-201ENST00000296930 P0C880 135 aa7.36□□□□□ -1.23
NPM1-201ENST00000296930 SEC61GP60059 68 aa7.36□□□□□ -1.23
NPM1-201ENST00000296930 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
NPM1-201ENST00000296930 Q5VV11 94 aa7.36□□□□□ -1.23
NPM1-201ENST00000296930 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
NPM1-201ENST00000296930 MT1BP07438 61 aa7.34□□□□□ -1.23
NPM1-201ENST00000296930 KRTAP4-2Q9BYR5 136 aa7.34□□□□□ -1.23
NPM1-201ENST00000296930 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
NPM1-201ENST00000296930 A6NN06 94 aa7.33□□□□□ -1.24
NPM1-201ENST00000296930 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
NPM1-201ENST00000296930 PSPHP1O15172 72 aa7.31□□□□□ -1.24
NPM1-201ENST00000296930 KRTAP4-11Q9BYQ6 195 aa7.23□□□□□ -1.25
NPM1-201ENST00000296930 KRTAP10-5P60370 271 aa7.21□□□□□ -1.25
NPM1-201ENST00000296930 CRIPTQ9P021 101 aa7.21□□□□□ -1.25
NPM1-201ENST00000296930 A0A1B0GU33 70 aa7.2□□□□□ -1.26
NPM1-201ENST00000296930 H3BS24 57 aa7.19□□□□□ -1.26
NPM1-201ENST00000296930 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
NPM1-201ENST00000296930 R4GN34 69 aa7.14□□□□□ -1.27
NPM1-201ENST00000296930 M0QZ58 72 aa7.13□□□□□ -1.27
NPM1-201ENST00000296930 UQCR11O14957 56 aa7.12□□□□□ -1.27
NPM1-201ENST00000296930 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
NPM1-201ENST00000296930 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
NPM1-201ENST00000296930 NEBP20929 6669 aa7.08□□□□□ -1.28
NPM1-201ENST00000296930 A6NED7 52 aa7.07□□□□□ -1.28
NPM1-201ENST00000296930 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
NPM1-201ENST00000296930 KRTAP5-9P26371 169 aa7.03□□□□□ -1.28
NPM1-201ENST00000296930 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
NPM1-201ENST00000296930 A8MU10 97 aa7□□□□□ -1.29
NPM1-201ENST00000296930 LINC01554Q52M75 96 aa7□□□□□ -1.29
NPM1-201ENST00000296930 A0A0D9SG42 100 aa6.97□□□□□ -1.29
NPM1-201ENST00000296930 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
NPM1-201ENST00000296930 KMT2DO14686 5537 aa6.93□□□□□ -1.3
NPM1-201ENST00000296930 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
NPM1-201ENST00000296930 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
NPM1-201ENST00000296930 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
NPM1-201ENST00000296930 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
NPM1-201ENST00000296930 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
NPM1-201ENST00000296930 BRK1Q8WUW1 75 aa6.86□□□□□ -1.31
NPM1-201ENST00000296930 MT1XP80297 61 aa6.85□□□□□ -1.31
NPM1-201ENST00000296930 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
NPM1-201ENST00000296930 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
NPM1-201ENST00000296930 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
NPM1-201ENST00000296930 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
NPM1-201ENST00000296930 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
NPM1-201ENST00000296930 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
NPM1-201ENST00000296930 SPRR2EP22531 72 aa6.71□□□□□ -1.34
NPM1-201ENST00000296930 SPRR2BP35325 72 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms