RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 C4orf26Q17RF5 130 aa4.13□□□□□ -1.75
TMEM258-201ENST00000257262 ATP5EP2Q5VTU8 51 aa4.13□□□□□ -1.75
TMEM258-201ENST00000257262 LINC00643Q86TS7 51 aa4.11□□□□□ -1.75
TMEM258-201ENST00000257262 MT1FP04733 61 aa4.1□□□□□ -1.75
TMEM258-201ENST00000257262 A0A087WVE0 104 aa4.09□□□□□ -1.75
TMEM258-201ENST00000257262 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
TMEM258-201ENST00000257262 TRAV22A0A0B4J277 110 aa4.07□□□□□ -1.76
TMEM258-201ENST00000257262 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
TMEM258-201ENST00000257262 J3QR89 54 aa4.06□□□□□ -1.76
TMEM258-201ENST00000257262 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
TMEM258-201ENST00000257262 CYP4F30PQ9H0H9 118 aa4.06□□□□□ -1.76
TMEM258-201ENST00000257262 UQCRQO14949 82 aa4.05□□□□□ -1.76
TMEM258-201ENST00000257262 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
TMEM258-201ENST00000257262 V9GYY9 64 aa4.05□□□□□ -1.76
TMEM258-201ENST00000257262 LOC101927531A0A1B0GV80 90 aa4.04□□□□□ -1.76
TMEM258-201ENST00000257262 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
TMEM258-201ENST00000257262 H0Y9P7 68 aa4.03□□□□□ -1.76
TMEM258-201ENST00000257262 USH2AO75445 5202 aa4.03□□□□□ -1.76
TMEM258-201ENST00000257262 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
TMEM258-201ENST00000257262 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
TMEM258-201ENST00000257262 ATOX1O00244 68 aa4.01□□□□□ -1.77
TMEM258-201ENST00000257262 S4R3F8 94 aa4.01□□□□□ -1.77
TMEM258-201ENST00000257262 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
TMEM258-201ENST00000257262 LCA10Q71F78 164 aa4□□□□□ -1.77
TMEM258-201ENST00000257262 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
TMEM258-201ENST00000257262 LINC00208Q96KT6 92 aa3.98□□□□□ -1.77
TMEM258-201ENST00000257262 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
TMEM258-201ENST00000257262 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
TMEM258-201ENST00000257262 K7ERU9 68 aa3.96□□□□□ -1.78
TMEM258-201ENST00000257262 MP68P56378 58 aa3.96□□□□□ -1.78
TMEM258-201ENST00000257262 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
TMEM258-201ENST00000257262 SCGB1A1P11684 91 aa3.95□□□□□ -1.78
TMEM258-201ENST00000257262 MT-ATP8P03928 68 aa3.93□□□□□ -1.78
TMEM258-201ENST00000257262 IMUPQ9GZP8 106 aa3.93□□□□□ -1.78
TMEM258-201ENST00000257262 FAM236AA0A1B0GUQ0 79 aa3.91□□□□□ -1.78
TMEM258-201ENST00000257262 FAM236BA0A1B0GV22 79 aa3.91□□□□□ -1.78
TMEM258-201ENST00000257262 H3BPC8 53 aa3.91□□□□□ -1.78
TMEM258-201ENST00000257262 A8MUN3 132 aa3.89□□□□□ -1.79
TMEM258-201ENST00000257262 NDUFC1O43677 76 aa3.87□□□□□ -1.79
TMEM258-201ENST00000257262 TRAV7A0A075B6U4 112 aa3.85□□□□□ -1.79
TMEM258-201ENST00000257262 KRTAP19-6Q3LI70 58 aa3.85□□□□□ -1.79
TMEM258-201ENST00000257262 SMIM20Q8N5G0 67 aa3.85□□□□□ -1.79
TMEM258-201ENST00000257262 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
TMEM258-201ENST00000257262 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
TMEM258-201ENST00000257262 H0YAA0 97 aa3.81□□□□□ -1.8
TMEM258-201ENST00000257262 NEBP20929 6669 aa3.8□□□□□ -1.8
TMEM258-201ENST00000257262 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
TMEM258-201ENST00000257262 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
TMEM258-201ENST00000257262 MT1BP07438 61 aa3.79□□□□□ -1.8
TMEM258-201ENST00000257262 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
TMEM258-201ENST00000257262 Q5VV11 94 aa3.78□□□□□ -1.8
TMEM258-201ENST00000257262 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
TMEM258-201ENST00000257262 SNURFQ9Y675 71 aa3.77□□□□□ -1.81
TMEM258-201ENST00000257262 ACYP2P14621 99 aa3.76□□□□□ -1.81
TMEM258-201ENST00000257262 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
TMEM258-201ENST00000257262 SERP2Q8N6R1 65 aa3.76□□□□□ -1.81
TMEM258-201ENST00000257262 C20orf197Q8N268 126 aa3.74□□□□□ -1.81
TMEM258-201ENST00000257262 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
TMEM258-201ENST00000257262 A6NN06 94 aa3.71□□□□□ -1.82
TMEM258-201ENST00000257262 P0C880 135 aa3.71□□□□□ -1.82
TMEM258-201ENST00000257262 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
TMEM258-201ENST00000257262 SPANXA2-OT1Q8N9U9 137 aa3.69□□□□□ -1.82
TMEM258-201ENST00000257262 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
TMEM258-201ENST00000257262 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
TMEM258-201ENST00000257262 SPTSSBQ8NFR3 76 aa3.68□□□□□ -1.82
TMEM258-201ENST00000257262 R4GN34 69 aa3.68□□□□□ -1.82
TMEM258-201ENST00000257262 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
TMEM258-201ENST00000257262 COX7CP15954 63 aa3.67□□□□□ -1.82
TMEM258-201ENST00000257262 MT3P25713 68 aa3.67□□□□□ -1.82
TMEM258-201ENST00000257262 M0QZ58 72 aa3.66□□□□□ -1.82
TMEM258-201ENST00000257262 PSPHP1O15172 72 aa3.66□□□□□ -1.82
TMEM258-201ENST00000257262 SMIM26A0A096LP01 95 aa3.64□□□□□ -1.83
TMEM258-201ENST00000257262 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
TMEM258-201ENST00000257262 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
TMEM258-201ENST00000257262 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
TMEM258-201ENST00000257262 LINC01554Q52M75 96 aa3.61□□□□□ -1.83
TMEM258-201ENST00000257262 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
TMEM258-201ENST00000257262 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
TMEM258-201ENST00000257262 H7BZZ5 65 aa3.59□□□□□ -1.83
TMEM258-201ENST00000257262 COA5Q86WW8 74 aa3.59□□□□□ -1.83
TMEM258-201ENST00000257262 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
TMEM258-201ENST00000257262 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
TMEM258-201ENST00000257262 MT1XP80297 61 aa3.57□□□□□ -1.84
TMEM258-201ENST00000257262 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
TMEM258-201ENST00000257262 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
TMEM258-201ENST00000257262 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
TMEM258-201ENST00000257262 CCDC179H3BU77 68 aa3.54□□□□□ -1.84
TMEM258-201ENST00000257262 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
TMEM258-201ENST00000257262 KRTAP13-4Q3LI77 160 aa3.51□□□□□ -1.85
TMEM258-201ENST00000257262 SERP1Q9Y6X1 66 aa3.5□□□□□ -1.85
TMEM258-201ENST00000257262 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
TMEM258-201ENST00000257262 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
TMEM258-201ENST00000257262 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
TMEM258-201ENST00000257262 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
TMEM258-201ENST00000257262 KMT2DO14686 5537 aa3.45□□□□□ -1.86
TMEM258-201ENST00000257262 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
TMEM258-201ENST00000257262 A0A1B0GU33 70 aa3.44□□□□□ -1.86
TMEM258-201ENST00000257262 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
TMEM258-201ENST00000257262 A0A1B0GU69 56 aa3.42□□□□□ -1.86
TMEM258-201ENST00000257262 A0A0D9SG42 100 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms