RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Rasl11aQ6IMB1 242 aa6.4□□□□□ -1.39
Trim39-205ENSMUST00000173369 Fam222aQ6PGH4 453 aa6.4□□□□□ -1.39
Trim39-205ENSMUST00000173369 Tmem41bQ8K1A5 291 aa6.4□□□□□ -1.39
Trim39-205ENSMUST00000173369 Rpl15Q9CZM2 204 aaKnown RBP6.4□□□□□ -1.39
Trim39-205ENSMUST00000173369 Q9D7E4 109 aa6.4□□□□□ -1.39
Trim39-205ENSMUST00000173369 Trbv14A0A140T8L9 115 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm45785A0A1B0GT05 94 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 MiaQ61865 130 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Vsig8Q6P3A4 417 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 AdtrpQ8C138 230 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Necap1Q9CR95 275 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Trav6-1A0A075B5Z8 112 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Iglc1A0A0G2JE99 106 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Igkv1-131A0A140T8M8 120 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm45800A0A1B0GT24 152 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm21616B6ZB74 166 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 1700056E22RikF7CNM6 234 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm26602M0QWA4 95 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Insl3O09107 122 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Bri3P28662 125 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Fhl1P97447 280 aaKnown RBP6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 GalmQ8K157 342 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr512Q8VFZ4 326 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr1195Q8VG21 308 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 GlmpQ9JHJ3 404 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Tcrg-C1A0A075B5Z0 172 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Igkv4-71A0A0G2JEH0 117 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 P01739 132 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 P2ry1P49650 373 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Slc35d2Q762D5 326 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Sdf2l1Q9ESP1 221 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 PdfS4R2K0 231 aa6.39□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ighv1-74A0A0G2JGK2 117 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr204E9Q8M0 305 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 P01812 117 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ren1P06281 402 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ucp1P12242 307 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Smim7Q5RKS2 75 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Vdac1Q60932 296 aaKnown RBP6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr981Q8VEU2 310 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 CtrlQ9ER05 264 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Mgst2A2RST1 147 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm20458E9PXJ7 78 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Zfp764E9QAP1 431 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Eda2rQ8BX35 297 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr1402Q8VET1 320 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr1367Q8VFG2 316 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Rab40cQ8VHQ4 281 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Cysltr1Q99JA4 352 aa6.38□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm2564F6Z9S8 108 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ccdc179J3QM76 67 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ccl19O70460 108 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Tmem241Q3UME2 297 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr433Q7TRV9 314 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 BC049762Q8C601 163 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr860Q8VFF7 317 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ube2e2Q91W82 201 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ucn2Q99ML8 113 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Map1lc3bQ9CQV6 125 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 RprmQ9JJ72 109 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Crybb3Q9JJU9 211 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Sec11aQ9R0P6 179 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Atoh7Q9Z2E5 149 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ighv7-4A0A0A6YXL5 121 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Zfp950A0A0U1RQ46 609 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Esp8F7AMQ8 149 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 PkigO70139 76 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Sec61gP60060 68 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Tmem213Q08EA8 116 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr335-psQ7TRY6 312 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Scgb3a2Q920H1 91 aa6.37□□□□□ -1.39
Trim39-205ENSMUST00000173369 Trav9d-1A0A075B699 112 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Trbv30A0A0B4J1P1 111 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm12886B1AZM5 119 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Zfp983E9PUT0 460 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Vmn1r1E9PVR6 306 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Eid2bE9Q2Y0 151 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 MalO09198 153 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Bmpr1bP36898 502 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Slc25a4P48962 298 aaKnown RBP6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr1382Q7TQT3 311 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr1444Q8VFX2 319 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Spata3Q9D9T6 193 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Psmb3Q9R1P1 205 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Khdc1bP0C7A0 126 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 RhobP62746 196 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Kcnip4Q6PHZ8 250 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Zfp273Q7M6W8 501 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 EtdQ80SW5 59 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr1202Q8VF98 309 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr206Q8VGP9 306 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 3110018I06RikQ9CXS0 120 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Ighv1-19A0A0A6YWX0 117 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm12887B1AVM1 119 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Sox15P43267 231 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Msrb3Q8BU85 253 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Q9DAQ5 155 aa6.36□□□□□ -1.39
Trim39-205ENSMUST00000173369 Trav6-4A0A075B6B4 115 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm10203F6QJ09 66 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Chek1O35280 476 aa6.35□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms