RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
CASC19-243ENST00000641588 HIVEP2P31629 2446 aa4□□□□□ -1.77
CASC19-243ENST00000641588 USP9YO00507 2555 aaPredicted RBP3.99□□□□□ -1.77
CASC19-243ENST00000641588 APCP25054 2843 aa3.99□□□□□ -1.77
CASC19-243ENST00000641588 CRYBG3Q68DQ2 2970 aa3.99□□□□□ -1.77
CASC19-243ENST00000641588 C20orf166-AS1Q96NR2 134 aa3.99□□□□□ -1.77
CASC19-243ENST00000641588 ASH1LQ9NR48 2969 aaKnown RBP3.98□□□□□ -1.77
CASC19-243ENST00000641588 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
CASC19-243ENST00000641588 CASC10Q5T4H9 136 aa3.98□□□□□ -1.77
CASC19-243ENST00000641588 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
CASC19-243ENST00000641588 H0YAA0 97 aa3.96□□□□□ -1.78
CASC19-243ENST00000641588 Q6ZSA8 131 aa3.96□□□□□ -1.78
CASC19-243ENST00000641588 CELSR2Q9HCU4 2923 aa3.96□□□□□ -1.78
CASC19-243ENST00000641588 A0A1B0GU33 70 aa3.95□□□□□ -1.78
CASC19-243ENST00000641588 FLNBO75369 2602 aaKnown RBP3.95□□□□□ -1.78
CASC19-243ENST00000641588 HECTD1Q9ULT8 2610 aa3.94□□□□□ -1.78
CASC19-243ENST00000641588 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
CASC19-243ENST00000641588 F8P00451 2351 aa3.94□□□□□ -1.78
CASC19-243ENST00000641588 A0A087WTM6 91 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 KRTAP10-3P60369 221 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 SSBP3-AS1Q7Z2R9 100 aa3.93□□□□□ -1.78
CASC19-243ENST00000641588 ABCA12Q86UK0 2595 aa3.92□□□□□ -1.78
CASC19-243ENST00000641588 ITPR2Q14571 2701 aa3.92□□□□□ -1.78
CASC19-243ENST00000641588 BAHCC1Q9P281 2608 aa3.91□□□□□ -1.78
CASC19-243ENST00000641588 MXRA5Q9NR99 2828 aa3.91□□□□□ -1.78
CASC19-243ENST00000641588 FBN2P35556 2912 aa3.91□□□□□ -1.78
CASC19-243ENST00000641588 J3QKU1 62 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 COX6B2Q6YFQ2 88 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 PSORS1C2Q9UIG4 136 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 TENM2Q9NT68 2774 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 NOTCH2Q04721 2471 aa3.9□□□□□ -1.78
CASC19-243ENST00000641588 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
CASC19-243ENST00000641588 CSMD2Q7Z408 3487 aa3.9□□□□□ -1.79
CASC19-243ENST00000641588 POLQO75417 2590 aa3.9□□□□□ -1.79
CASC19-243ENST00000641588 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
CASC19-243ENST00000641588 NBEAL2Q6ZNJ1 2754 aa3.89□□□□□ -1.79
CASC19-243ENST00000641588 NAV2Q8IVL1 2488 aa3.88□□□□□ -1.79
CASC19-243ENST00000641588 NBPF19A0A087WUL8 3843 aa3.87□□□□□ -1.79
CASC19-243ENST00000641588 SONP18583 2426 aaKnown RBP3.87□□□□□ -1.79
CASC19-243ENST00000641588 TEX15Q9BXT5 2789 aa3.87□□□□□ -1.79
CASC19-243ENST00000641588 SVEP1Q4LDE5 3571 aa3.87□□□□□ -1.79
CASC19-243ENST00000641588 NF1P21359 2839 aa3.86□□□□□ -1.79
CASC19-243ENST00000641588 CCDC168Q8NDH2 2452 aa3.86□□□□□ -1.79
CASC19-243ENST00000641588 MTORP42345 2549 aa3.86□□□□□ -1.79
CASC19-243ENST00000641588 KRTAP10-9P60411 292 aa3.85□□□□□ -1.79
CASC19-243ENST00000641588 KRTAP10-11P60412 298 aa3.85□□□□□ -1.79
CASC19-243ENST00000641588 PDZD2O15018 2839 aa3.85□□□□□ -1.79
CASC19-243ENST00000641588 MAST4O15021 2626 aa3.84□□□□□ -1.79
CASC19-243ENST00000641588 SPINK1P00995 79 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 SPACA4Q8TDM5 124 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 VPS13CQ709C8 3753 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 ZANQ9Y493 2812 aa3.83□□□□□ -1.8
CASC19-243ENST00000641588 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
CASC19-243ENST00000641588 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
CASC19-243ENST00000641588 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
CASC19-243ENST00000641588 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
CASC19-243ENST00000641588 ITPR3Q14573 2671 aa3.81□□□□□ -1.8
CASC19-243ENST00000641588 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 AKAP9Q99996 3911 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 TPRXLQ17RH7 258 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 TYMSOSQ8TAI1 123 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 CIRBP-AS1Q8TBR5 109 aa3.8□□□□□ -1.8
CASC19-243ENST00000641588 FLNAP21333 2647 aaKnown RBP3.79□□□□□ -1.8
CASC19-243ENST00000641588 SETD2Q9BYW2 2564 aaPredicted RBP3.79□□□□□ -1.8
CASC19-243ENST00000641588 ACANP16112 2415 aa3.78□□□□□ -1.8
CASC19-243ENST00000641588 ZNF469Q96JG9 3925 aaPredicted RBP3.78□□□□□ -1.8
CASC19-243ENST00000641588 HIVEP1P15822 2718 aa3.77□□□□□ -1.81
CASC19-243ENST00000641588 NBDYA0A0U1RRE5 68 aa3.77□□□□□ -1.81
CASC19-243ENST00000641588 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
CASC19-243ENST00000641588 KRTAP1-5Q9BYS1 174 aa3.76□□□□□ -1.81
CASC19-243ENST00000641588 NIPBLQ6KC79 2804 aaeCLIP3.75□□□□□ -1.81
CASC19-243ENST00000641588 TEP1Q99973 2627 aaKnown RBP3.74□□□□□ -1.81
CASC19-243ENST00000641588 UBE2DNLQ8IWF7 75 aa3.74□□□□□ -1.81
CASC19-243ENST00000641588 NSD1Q96L73 2696 aaPredicted RBP3.73□□□□□ -1.81
CASC19-243ENST00000641588 FLG2Q5D862 2391 aaPredicted RBP3.72□□□□□ -1.81
CASC19-243ENST00000641588 DNAH1Q9P2D7 4330 aa3.71□□□□□ -1.82
CASC19-243ENST00000641588 Q6ZRN7 208 aaPredicted RBP3.7□□□□□ -1.82
CASC19-243ENST00000641588 ANK3Q12955 4377 aaKnown RBP3.69□□□□□ -1.82
CASC19-243ENST00000641588 SRRM2Q9UQ35 2752 aaKnown RBP3.68□□□□□ -1.82
CASC19-243ENST00000641588 APLNQ9ULZ1 77 aa3.68□□□□□ -1.82
CASC19-243ENST00000641588 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
CASC19-243ENST00000641588 ATRQ13535 2644 aa3.66□□□□□ -1.82
CASC19-243ENST00000641588 CUBNO60494 3623 aa3.64□□□□□ -1.83
CASC19-243ENST00000641588 KRTAP13-2Q52LG2 175 aa3.63□□□□□ -1.83
CASC19-243ENST00000641588 SMR3AQ99954 134 aa3.63□□□□□ -1.83
CASC19-243ENST00000641588 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
CASC19-243ENST00000641588 S4R3F8 94 aa3.62□□□□□ -1.83
CASC19-243ENST00000641588 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
CASC19-243ENST00000641588 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
CASC19-243ENST00000641588 COL6A5A8TX70 2615 aa3.61□□□□□ -1.83
CASC19-243ENST00000641588 TENM1Q9UKZ4 2725 aa3.6□□□□□ -1.83
CASC19-243ENST00000641588 FBN1P35555 2871 aaKnown RBP3.6□□□□□ -1.83
CASC19-243ENST00000641588 VWFP04275 2813 aa3.59□□□□□ -1.83
CASC19-243ENST00000641588 STAB1Q9NY15 2570 aa3.59□□□□□ -1.84
CASC19-243ENST00000641588 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
CASC19-243ENST00000641588 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
CASC19-243ENST00000641588 TENM3Q9P273 2699 aa3.57□□□□□ -1.84
CASC19-243ENST00000641588 A0A0D9SG42 100 aa3.57□□□□□ -1.84
CASC19-243ENST00000641588 PKD1L1Q8TDX9 2849 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms