RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 C8orf87E5RJ46 101 aa4.81□□□□□ -1.64
PTP4A1-207ENST00000639568 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
PTP4A1-207ENST00000639568 TRGC2P03986 189 aa4.79□□□□□ -1.64
PTP4A1-207ENST00000639568 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
PTP4A1-207ENST00000639568 DSCR8Q96T75 97 aa4.79□□□□□ -1.64
PTP4A1-207ENST00000639568 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
PTP4A1-207ENST00000639568 PAM16Q9Y3D7 125 aa4.79□□□□□ -1.64
PTP4A1-207ENST00000639568 H3BMG7 143 aa4.78□□□□□ -1.64
PTP4A1-207ENST00000639568 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
PTP4A1-207ENST00000639568 RAB37Q96AX2 223 aa4.77□□□□□ -1.65
PTP4A1-207ENST00000639568 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
PTP4A1-207ENST00000639568 BVES-AS1Q5T3Y7 98 aa4.76□□□□□ -1.65
PTP4A1-207ENST00000639568 SNCGO76070 127 aa4.75□□□□□ -1.65
PTP4A1-207ENST00000639568 C5orf47Q569G3 176 aa4.75□□□□□ -1.65
PTP4A1-207ENST00000639568 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
PTP4A1-207ENST00000639568 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
PTP4A1-207ENST00000639568 CLLU1Q5K131 121 aa4.73□□□□□ -1.65
PTP4A1-207ENST00000639568 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
PTP4A1-207ENST00000639568 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
PTP4A1-207ENST00000639568 SYS1-DBNDD2H3BUS1 97 aa4.71□□□□□ -1.66
PTP4A1-207ENST00000639568 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
PTP4A1-207ENST00000639568 PRO2289Q9P1D8 64 aa4.71□□□□□ -1.66
PTP4A1-207ENST00000639568 FABP2P12104 132 aa4.7□□□□□ -1.66
PTP4A1-207ENST00000639568 ANKRD29Q8N6D5 301 aa4.69□□□□□ -1.66
PTP4A1-207ENST00000639568 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
PTP4A1-207ENST00000639568 SNRPEP62304 92 aaKnown RBP4.67□□□□□ -1.66
PTP4A1-207ENST00000639568 LINC01545Q5VT33 79 aa4.67□□□□□ -1.66
PTP4A1-207ENST00000639568 TRACP01848 142 aa4.66□□□□□ -1.66
PTP4A1-207ENST00000639568 CSAG1Q6PB30 78 aa4.65□□□□□ -1.67
PTP4A1-207ENST00000639568 PET117Q6UWS5 81 aa4.65□□□□□ -1.67
PTP4A1-207ENST00000639568 NDUFB1O75438 58 aa4.63□□□□□ -1.67
PTP4A1-207ENST00000639568 SNAPINO95295 136 aa4.63□□□□□ -1.67
PTP4A1-207ENST00000639568 APOC3P02656 99 aa4.63□□□□□ -1.67
PTP4A1-207ENST00000639568 PRR15Q8IV56 129 aa4.63□□□□□ -1.67
PTP4A1-207ENST00000639568 YPEL4Q96NS1 127 aa4.63□□□□□ -1.67
PTP4A1-207ENST00000639568 A0A1B0GV72 72 aa4.62□□□□□ -1.67
PTP4A1-207ENST00000639568 J3KT08 172 aa4.62□□□□□ -1.67
PTP4A1-207ENST00000639568 CCKP06307 115 aa4.62□□□□□ -1.67
PTP4A1-207ENST00000639568 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
PTP4A1-207ENST00000639568 H0YGX0 51 aa4.6□□□□□ -1.67
PTP4A1-207ENST00000639568 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
PTP4A1-207ENST00000639568 SVBPQ8N300 66 aa4.6□□□□□ -1.67
PTP4A1-207ENST00000639568 CRIPTQ9P021 101 aa4.6□□□□□ -1.67
PTP4A1-207ENST00000639568 NDUFA5Q16718 116 aa4.59□□□□□ -1.67
PTP4A1-207ENST00000639568 LCA10Q71F78 164 aa4.59□□□□□ -1.67
PTP4A1-207ENST00000639568 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
PTP4A1-207ENST00000639568 C2orf91Q6ZV80 131 aa4.58□□□□□ -1.68
PTP4A1-207ENST00000639568 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
PTP4A1-207ENST00000639568 S4R3F8 94 aa4.58□□□□□ -1.68
PTP4A1-207ENST00000639568 C4orf26Q17RF5 130 aa4.57□□□□□ -1.68
PTP4A1-207ENST00000639568 Q6ZVQ6 151 aa4.57□□□□□ -1.68
PTP4A1-207ENST00000639568 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
PTP4A1-207ENST00000639568 MT1XP80297 61 aa4.56□□□□□ -1.68
PTP4A1-207ENST00000639568 C7orf65Q6ZTY9 151 aa4.56□□□□□ -1.68
PTP4A1-207ENST00000639568 VPS25Q9BRG1 176 aa4.56□□□□□ -1.68
PTP4A1-207ENST00000639568 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
PTP4A1-207ENST00000639568 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
PTP4A1-207ENST00000639568 KRTDAPP60985 99 aa4.53□□□□□ -1.68
PTP4A1-207ENST00000639568 ATOH7Q8N100 152 aa4.53□□□□□ -1.68
PTP4A1-207ENST00000639568 A0A1B0GX51 115 aa4.52□□□□□ -1.69
PTP4A1-207ENST00000639568 NDUFS5O43920 106 aa4.51□□□□□ -1.69
PTP4A1-207ENST00000639568 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
PTP4A1-207ENST00000639568 RBM3P98179 157 aaKnown RBP4.5□□□□□ -1.69
PTP4A1-207ENST00000639568 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
PTP4A1-207ENST00000639568 H3BQ85 93 aa4.49□□□□□ -1.69
PTP4A1-207ENST00000639568 DNAL4O96015 105 aa4.48□□□□□ -1.69
PTP4A1-207ENST00000639568 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
PTP4A1-207ENST00000639568 HIST1H4GQ99525 98 aa4.48□□□□□ -1.69
PTP4A1-207ENST00000639568 MRPL34Q9BQ48 92 aaKnown RBP4.48□□□□□ -1.69
PTP4A1-207ENST00000639568 ORMDL1Q9P0S3 153 aa4.48□□□□□ -1.69
PTP4A1-207ENST00000639568 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
PTP4A1-207ENST00000639568 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
PTP4A1-207ENST00000639568 K7EQZ3 153 aa4.43□□□□□ -1.7
PTP4A1-207ENST00000639568 Q6ZQT0 140 aa4.43□□□□□ -1.7
PTP4A1-207ENST00000639568 MT4P47944 62 aa4.42□□□□□ -1.7
PTP4A1-207ENST00000639568 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
PTP4A1-207ENST00000639568 PDE6GP18545 87 aa4.41□□□□□ -1.7
PTP4A1-207ENST00000639568 Q5W150 140 aa4.41□□□□□ -1.7
PTP4A1-207ENST00000639568 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
PTP4A1-207ENST00000639568 hDV103S1A0JD37 113 aa4.4□□□□□ -1.71
PTP4A1-207ENST00000639568 A8MUN3 132 aa4.4□□□□□ -1.71
PTP4A1-207ENST00000639568 C1orf64Q8NEQ6 169 aa4.4□□□□□ -1.71
PTP4A1-207ENST00000639568 HSBP1L1C9JCN9 74 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BKO60814 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BJP06899 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BOP23527 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BBP33778 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BDP58876 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BCP62807 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST2H2BEQ16778 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BHQ93079 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BNQ99877 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 HIST1H2BMQ99879 126 aa4.39□□□□□ -1.71
PTP4A1-207ENST00000639568 A0A0B4J2C4 111 aa4.38□□□□□ -1.71
PTP4A1-207ENST00000639568 MMP24-AS1A0A0U1RRL7 71 aa4.38□□□□□ -1.71
PTP4A1-207ENST00000639568 C9JAW5 83 aa4.36□□□□□ -1.71
PTP4A1-207ENST00000639568 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
PTP4A1-207ENST00000639568 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
PTP4A1-207ENST00000639568 PRO1854Q9UHT4 67 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms