RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 HYDINQ4G0P3 5121 aa7.08□□□□□ -1.28
CLN6-217ENST00000636964 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
CLN6-217ENST00000636964 DNAH17Q9UFH2 4485 aa7.07□□□□□ -1.28
CLN6-217ENST00000636964 C1orf137Q5JT78 98 aa7.05□□□□□ -1.28
CLN6-217ENST00000636964 DEFB116Q30KQ4 102 aa7.04□□□□□ -1.28
CLN6-217ENST00000636964 NDUFB1O75438 58 aa7.04□□□□□ -1.28
CLN6-217ENST00000636964 Q8NBF4 154 aa7.03□□□□□ -1.28
CLN6-217ENST00000636964 SPRR4Q96PI1 79 aa7.03□□□□□ -1.28
CLN6-217ENST00000636964 DNAH6Q9C0G6 4158 aa7.03□□□□□ -1.28
CLN6-217ENST00000636964 PSORS1C2Q9UIG4 136 aa7.02□□□□□ -1.29
CLN6-217ENST00000636964 PLAC8Q9NZF1 115 aa7.02□□□□□ -1.29
CLN6-217ENST00000636964 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
CLN6-217ENST00000636964 SPINK7P58062 85 aa7.01□□□□□ -1.29
CLN6-217ENST00000636964 KRTAP13-1Q8IUC0 172 aa7□□□□□ -1.29
CLN6-217ENST00000636964 ALMS1Q8TCU4 4167 aa7□□□□□ -1.29
CLN6-217ENST00000636964 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
CLN6-217ENST00000636964 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
CLN6-217ENST00000636964 DNAH8Q96JB1 4490 aa6.99□□□□□ -1.29
CLN6-217ENST00000636964 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
CLN6-217ENST00000636964 CIRBP-AS1Q8TBR5 109 aa6.98□□□□□ -1.29
CLN6-217ENST00000636964 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
CLN6-217ENST00000636964 A0A1B0GW54 56 aa6.97□□□□□ -1.29
CLN6-217ENST00000636964 KRTAP10-1P60331 282 aa6.97□□□□□ -1.29
CLN6-217ENST00000636964 DNAH5Q8TE73 4624 aa6.96□□□□□ -1.29
CLN6-217ENST00000636964 ANAPC11Q9NYG5 84 aa6.96□□□□□ -1.3
CLN6-217ENST00000636964 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
CLN6-217ENST00000636964 ROMO1P60602 79 aa6.95□□□□□ -1.3
CLN6-217ENST00000636964 RPL37AP61513 92 aaKnown RBP6.95□□□□□ -1.3
CLN6-217ENST00000636964 FAT2Q9NYQ8 4349 aa6.95□□□□□ -1.3
CLN6-217ENST00000636964 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
CLN6-217ENST00000636964 IGLV9-49A0A0B4J1Y8 123 aa6.94□□□□□ -1.3
CLN6-217ENST00000636964 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
CLN6-217ENST00000636964 SPRR1BP22528 89 aa6.94□□□□□ -1.3
CLN6-217ENST00000636964 PKD1P98161 4303 aa6.94□□□□□ -1.3
CLN6-217ENST00000636964 ZNF861PO60384 105 aa6.93□□□□□ -1.3
CLN6-217ENST00000636964 IGLV8-61A0A075B6I0 122 aa6.92□□□□□ -1.3
CLN6-217ENST00000636964 A0A087WSZ3 146 aa6.92□□□□□ -1.3
CLN6-217ENST00000636964 SACSQ9NZJ4 4579 aa6.91□□□□□ -1.3
CLN6-217ENST00000636964 IGLV7-43P04211 117 aa6.9□□□□□ -1.31
CLN6-217ENST00000636964 COA5Q86WW8 74 aa6.9□□□□□ -1.31
CLN6-217ENST00000636964 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.31
CLN6-217ENST00000636964 LINC01558Q9Y6Z2 57 aa6.89□□□□□ -1.31
CLN6-217ENST00000636964 H0Y9P7 68 aa6.89□□□□□ -1.31
CLN6-217ENST00000636964 Q6ZSA8 131 aa6.88□□□□□ -1.31
CLN6-217ENST00000636964 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
CLN6-217ENST00000636964 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
CLN6-217ENST00000636964 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
CLN6-217ENST00000636964 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
CLN6-217ENST00000636964 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
CLN6-217ENST00000636964 A0A087X002 238 aa6.81□□□□□ -1.32
CLN6-217ENST00000636964 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
CLN6-217ENST00000636964 KMT2CQ8NEZ4 4911 aaKnown RBP6.79□□□□□ -1.32
CLN6-217ENST00000636964 H3BPC8 53 aa6.79□□□□□ -1.32
CLN6-217ENST00000636964 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
CLN6-217ENST00000636964 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
CLN6-217ENST00000636964 PCOTHQ58A44 107 aa6.77□□□□□ -1.33
CLN6-217ENST00000636964 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
CLN6-217ENST00000636964 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
CLN6-217ENST00000636964 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
CLN6-217ENST00000636964 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
CLN6-217ENST00000636964 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
CLN6-217ENST00000636964 A8MWP4 228 aa6.75□□□□□ -1.33
CLN6-217ENST00000636964 P0C880 135 aa6.75□□□□□ -1.33
CLN6-217ENST00000636964 RYR2Q92736 4967 aa6.74□□□□□ -1.33
CLN6-217ENST00000636964 DYNC1H1Q14204 4646 aaKnown RBP6.72□□□□□ -1.33
CLN6-217ENST00000636964 Q96NJ1 140 aa6.72□□□□□ -1.33
CLN6-217ENST00000636964 HRES1P13985 223 aa6.71□□□□□ -1.33
CLN6-217ENST00000636964 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.33
CLN6-217ENST00000636964 CDK2AP2O75956 126 aa6.7□□□□□ -1.34
CLN6-217ENST00000636964 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
CLN6-217ENST00000636964 SPINK6Q6UWN8 80 aa6.69□□□□□ -1.34
CLN6-217ENST00000636964 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
CLN6-217ENST00000636964 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
CLN6-217ENST00000636964 NDUFAF8A1L188 74 aa6.65□□□□□ -1.35
CLN6-217ENST00000636964 FAT1Q14517 4588 aa6.64□□□□□ -1.35
CLN6-217ENST00000636964 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
CLN6-217ENST00000636964 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
CLN6-217ENST00000636964 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
CLN6-217ENST00000636964 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
CLN6-217ENST00000636964 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
CLN6-217ENST00000636964 RYR3Q15413 4870 aa6.6□□□□□ -1.35
CLN6-217ENST00000636964 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
CLN6-217ENST00000636964 DMBT1Q9UGM3 2413 aaPredicted RBP6.59□□□□□ -1.35
CLN6-217ENST00000636964 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
CLN6-217ENST00000636964 C20orf166-AS1Q96NR2 134 aa6.59□□□□□ -1.35
CLN6-217ENST00000636964 KRTAP10-4P60372 401 aaPredicted RBP6.58□□□□□ -1.36
CLN6-217ENST00000636964 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
CLN6-217ENST00000636964 Q5W150 140 aa6.54□□□□□ -1.36
CLN6-217ENST00000636964 A0A1B0GU69 56 aa6.53□□□□□ -1.36
CLN6-217ENST00000636964 A8MUU9 505 aa6.53□□□□□ -1.36
CLN6-217ENST00000636964 UQCR11O14957 56 aa6.53□□□□□ -1.36
CLN6-217ENST00000636964 KRTAP13-3Q3SY46 172 aa6.53□□□□□ -1.36
CLN6-217ENST00000636964 K7ERS5 55 aa6.51□□□□□ -1.37
CLN6-217ENST00000636964 LINC00304Q8N9R0 145 aa6.51□□□□□ -1.37
CLN6-217ENST00000636964 MRPL34Q9BQ48 92 aaKnown RBP6.51□□□□□ -1.37
CLN6-217ENST00000636964 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
CLN6-217ENST00000636964 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
CLN6-217ENST00000636964 SPINK1P00995 79 aa6.5□□□□□ -1.37
CLN6-217ENST00000636964 FAM229AH3BQW9 127 aa6.48□□□□□ -1.37
CLN6-217ENST00000636964 LCE2BO14633 110 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms