RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 SIGMAR1Q99720 223 aa4.52□□□□□ -1.69
MECP2-220ENST00000631210 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
MECP2-220ENST00000631210 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
MECP2-220ENST00000631210 A8MWP4 228 aa4.51□□□□□ -1.69
MECP2-220ENST00000631210 J3KT08 172 aa4.51□□□□□ -1.69
MECP2-220ENST00000631210 A0A1B0GVX0 72 aa4.5□□□□□ -1.69
MECP2-220ENST00000631210 K7EQZ3 153 aa4.49□□□□□ -1.69
MECP2-220ENST00000631210 ACYP1P07311 99 aa4.49□□□□□ -1.69
MECP2-220ENST00000631210 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
MECP2-220ENST00000631210 PRR15Q8IV56 129 aa4.49□□□□□ -1.69
MECP2-220ENST00000631210 UBL5Q9BZL1 73 aa4.49□□□□□ -1.69
MECP2-220ENST00000631210 IGHV6-1A0A0B4J1U7 121 aa4.48□□□□□ -1.69
MECP2-220ENST00000631210 BPY2O14599 106 aa4.48□□□□□ -1.69
MECP2-220ENST00000631210 Q8N9L7 120 aa4.48□□□□□ -1.69
MECP2-220ENST00000631210 CDIP1Q9H305 208 aa4.48□□□□□ -1.69
MECP2-220ENST00000631210 LINC00313P59037 77 aa4.47□□□□□ -1.69
MECP2-220ENST00000631210 MMP24-AS1A0A0U1RRL7 71 aa4.46□□□□□ -1.7
MECP2-220ENST00000631210 A8MUU9 505 aa4.46□□□□□ -1.7
MECP2-220ENST00000631210 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
MECP2-220ENST00000631210 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
MECP2-220ENST00000631210 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
MECP2-220ENST00000631210 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
MECP2-220ENST00000631210 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
MECP2-220ENST00000631210 NDUFB1O75438 58 aa4.44□□□□□ -1.7
MECP2-220ENST00000631210 CXCL6P80162 114 aa4.44□□□□□ -1.7
MECP2-220ENST00000631210 Q75L30 129 aa4.44□□□□□ -1.7
MECP2-220ENST00000631210 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
MECP2-220ENST00000631210 J3QR89 54 aa4.42□□□□□ -1.7
MECP2-220ENST00000631210 LINC00643Q86TS7 51 aa4.42□□□□□ -1.7
MECP2-220ENST00000631210 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
MECP2-220ENST00000631210 PCOTHQ58A44 107 aa4.41□□□□□ -1.7
MECP2-220ENST00000631210 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
MECP2-220ENST00000631210 ATP5EP2Q5VTU8 51 aa4.4□□□□□ -1.71
MECP2-220ENST00000631210 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
MECP2-220ENST00000631210 MUC2Q02817 5179 aa4.4□□□□□ -1.71
MECP2-220ENST00000631210 hDV103S1A0JD37 113 aa4.39□□□□□ -1.71
MECP2-220ENST00000631210 K7ERU9 68 aa4.39□□□□□ -1.71
MECP2-220ENST00000631210 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
MECP2-220ENST00000631210 HCG22E2RYF7 251 aa4.38□□□□□ -1.71
MECP2-220ENST00000631210 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
MECP2-220ENST00000631210 WFDC13Q8IUB5 93 aa4.38□□□□□ -1.71
MECP2-220ENST00000631210 CASC2Q6XLA1 102 aa4.37□□□□□ -1.71
MECP2-220ENST00000631210 A0A087WVE0 104 aa4.36□□□□□ -1.71
MECP2-220ENST00000631210 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
MECP2-220ENST00000631210 Q5W150 140 aa4.34□□□□□ -1.71
MECP2-220ENST00000631210 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
MECP2-220ENST00000631210 HIST1H4AP62805 103 aaKnown RBP4.33□□□□□ -1.72
MECP2-220ENST00000631210 KRTAP19-2Q3LHN2 52 aa4.33□□□□□ -1.72
MECP2-220ENST00000631210 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
MECP2-220ENST00000631210 LCE2CQ5TA81 110 aa4.3□□□□□ -1.72
MECP2-220ENST00000631210 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
MECP2-220ENST00000631210 NDUFS5O43920 106 aa4.28□□□□□ -1.72
MECP2-220ENST00000631210 HRES1P13985 223 aa4.28□□□□□ -1.72
MECP2-220ENST00000631210 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
MECP2-220ENST00000631210 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
MECP2-220ENST00000631210 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
MECP2-220ENST00000631210 A0A0U1RQV1 116 aa4.26□□□□□ -1.73
MECP2-220ENST00000631210 SPINK7P58062 85 aa4.25□□□□□ -1.73
MECP2-220ENST00000631210 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
MECP2-220ENST00000631210 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
MECP2-220ENST00000631210 IGKV2-30P06310 120 aa4.23□□□□□ -1.73
MECP2-220ENST00000631210 FAM236AA0A1B0GUQ0 79 aa4.22□□□□□ -1.73
MECP2-220ENST00000631210 FAM236BA0A1B0GV22 79 aa4.22□□□□□ -1.73
MECP2-220ENST00000631210 UQCRQO14949 82 aa4.22□□□□□ -1.73
MECP2-220ENST00000631210 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
MECP2-220ENST00000631210 TRAV22A0A0B4J277 110 aa4.2□□□□□ -1.74
MECP2-220ENST00000631210 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
MECP2-220ENST00000631210 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
MECP2-220ENST00000631210 H0Y9P7 68 aa4.18□□□□□ -1.74
MECP2-220ENST00000631210 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
MECP2-220ENST00000631210 MT1HP80294 61 aa4.17□□□□□ -1.74
MECP2-220ENST00000631210 SCGB1A1P11684 91 aa4.16□□□□□ -1.74
MECP2-220ENST00000631210 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
MECP2-220ENST00000631210 TRAV7A0A075B6U4 112 aa4.15□□□□□ -1.75
MECP2-220ENST00000631210 C5orf47Q569G3 176 aa4.15□□□□□ -1.75
MECP2-220ENST00000631210 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
MECP2-220ENST00000631210 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
MECP2-220ENST00000631210 ATOX1O00244 68 aa4.13□□□□□ -1.75
MECP2-220ENST00000631210 KLKP1Q107X0 134 aa4.13□□□□□ -1.75
MECP2-220ENST00000631210 C4orf26Q17RF5 130 aa4.13□□□□□ -1.75
MECP2-220ENST00000631210 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
MECP2-220ENST00000631210 SMIM20Q8N5G0 67 aa4.12□□□□□ -1.75
MECP2-220ENST00000631210 RBM12B-AS1Q9P1G2 102 aa4.12□□□□□ -1.75
MECP2-220ENST00000631210 H3BPC8 53 aa4.11□□□□□ -1.75
MECP2-220ENST00000631210 COX6B2Q6YFQ2 88 aa4.11□□□□□ -1.75
MECP2-220ENST00000631210 SERP2Q8N6R1 65 aa4.11□□□□□ -1.75
MECP2-220ENST00000631210 MP68P56378 58 aa4.1□□□□□ -1.75
MECP2-220ENST00000631210 FAM236DA0A1B0GTK5 79 aa4.08□□□□□ -1.76
MECP2-220ENST00000631210 FAM236CP0DP71 79 aa4.08□□□□□ -1.76
MECP2-220ENST00000631210 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
MECP2-220ENST00000631210 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
MECP2-220ENST00000631210 COX7CP15954 63 aa4.05□□□□□ -1.76
MECP2-220ENST00000631210 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
MECP2-220ENST00000631210 SNURFQ9Y675 71 aa4.05□□□□□ -1.76
MECP2-220ENST00000631210 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
MECP2-220ENST00000631210 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
MECP2-220ENST00000631210 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
MECP2-220ENST00000631210 CYSTM1Q9H1C7 97 aa4.04□□□□□ -1.76
MECP2-220ENST00000631210 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
MECP2-220ENST00000631210 ANAPC13Q9BS18 74 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms