RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 BRD3OSQ6XYD6 125 aa2.38□□□□□ -2.03
R3HDM1-220ENST00000628915 UNQ6190/PRO20217Q6UXQ8 127 aa2.38□□□□□ -2.03
R3HDM1-220ENST00000628915 APCP25054 2843 aa2.38□□□□□ -2.03
R3HDM1-220ENST00000628915 RIF1Q5UIP0 2472 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-220ENST00000628915 CLPSL2Q6UWE3 100 aa2.38□□□□□ -2.03
R3HDM1-220ENST00000628915 PANO1I0J062 215 aa2.37□□□□□ -2.03
R3HDM1-220ENST00000628915 LCE1DQ5T752 114 aa2.37□□□□□ -2.03
R3HDM1-220ENST00000628915 DEFB130BP0DP73 79 aa2.37□□□□□ -2.03
R3HDM1-220ENST00000628915 DEFB130AP0DP74 79 aa2.37□□□□□ -2.03
R3HDM1-220ENST00000628915 A0A1W2PNN7 141 aa2.36□□□□□ -2.03
R3HDM1-220ENST00000628915 Q8N377 158 aa2.36□□□□□ -2.03
R3HDM1-220ENST00000628915 USP24Q9UPU5 2620 aa2.36□□□□□ -2.03
R3HDM1-220ENST00000628915 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
R3HDM1-220ENST00000628915 WWC2-AS2Q96NR7 200 aa2.36□□□□□ -2.03
R3HDM1-220ENST00000628915 JMJD1CQ15652 2540 aa2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 C15orf56Q8N910 161 aa2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 Q96NJ1 140 aa2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 MYO9AB2RTY4 2548 aa2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 PRO0255Q9UI72 69 aa2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 ANKHD1Q8IWZ3 2542 aaKnown RBP2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 POLQO75417 2590 aa2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 ACANP16112 2415 aa2.35□□□□□ -2.03
R3HDM1-220ENST00000628915 FAM168BA1KXE4 195 aa2.34□□□□□ -2.03
R3HDM1-220ENST00000628915 DEFB124Q8NES8 71 aa2.34□□□□□ -2.03
R3HDM1-220ENST00000628915 KRTAP26-1Q6PEX3 210 aa2.34□□□□□ -2.03
R3HDM1-220ENST00000628915 A0A087WTM6 91 aa2.34□□□□□ -2.04
R3HDM1-220ENST00000628915 KRTAP29-1A8MX34 341 aaPredicted RBP2.34□□□□□ -2.04
R3HDM1-220ENST00000628915 LINC00472Q9H8W2 130 aa2.34□□□□□ -2.04
R3HDM1-220ENST00000628915 SETXQ7Z333 2677 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-220ENST00000628915 PTPN13Q12923 2485 aa2.33□□□□□ -2.04
R3HDM1-220ENST00000628915 C10orf99Q6UWK7 81 aa2.33□□□□□ -2.04
R3HDM1-220ENST00000628915 A0A1B0GU33 70 aa2.33□□□□□ -2.04
R3HDM1-220ENST00000628915 Q8N1X5 172 aa2.33□□□□□ -2.04
R3HDM1-220ENST00000628915 MUC6Q6W4X9 2439 aa2.33□□□□□ -2.04
R3HDM1-220ENST00000628915 Q6ZRX8 168 aa2.33□□□□□ -2.04
R3HDM1-220ENST00000628915 ZANQ9Y493 2812 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 CHD6Q8TD26 2715 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 A0A096LPF7 62 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 A0A0G2JQZ4 141 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 SPINK1P00995 79 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 KRTAP4-7Q9BYR0 210 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 CCDC168Q8NDH2 2452 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 IGKV2D-30A0A075B6S6 120 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 IGKV2-24A0A0C4DH68 120 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 PRLHP81277 87 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 DEFB136Q30KP8 78 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
R3HDM1-220ENST00000628915 R4GN34 69 aa2.31□□□□□ -2.04
R3HDM1-220ENST00000628915 LELP1Q5T871 98 aa2.31□□□□□ -2.04
R3HDM1-220ENST00000628915 UBE2DNLQ8IWF7 75 aa2.3□□□□□ -2.04
R3HDM1-220ENST00000628915 TENM1Q9UKZ4 2725 aa2.3□□□□□ -2.04
R3HDM1-220ENST00000628915 GIG44P09565 113 aaPredicted RBP2.3□□□□□ -2.04
R3HDM1-220ENST00000628915 PSORS1C2Q9UIG4 136 aa2.29□□□□□ -2.04
R3HDM1-220ENST00000628915 IGFL1Q6UW32 110 aa2.29□□□□□ -2.04
R3HDM1-220ENST00000628915 KRTAP4-9Q9BYQ8 210 aa2.29□□□□□ -2.04
R3HDM1-220ENST00000628915 NOTCH2Q04721 2471 aa2.29□□□□□ -2.04
R3HDM1-220ENST00000628915 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-220ENST00000628915 LY6G6CO95867 125 aa2.28□□□□□ -2.04
R3HDM1-220ENST00000628915 KRTAP15-1Q3LI76 137 aa2.28□□□□□ -2.04
R3HDM1-220ENST00000628915 SPRR1AP35321 89 aa2.28□□□□□ -2.04
R3HDM1-220ENST00000628915 C14orf177Q52M58 125 aa2.28□□□□□ -2.05
R3HDM1-220ENST00000628915 MRPL34Q9BQ48 92 aaKnown RBP2.27□□□□□ -2.05
R3HDM1-220ENST00000628915 LRP1BQ9NZR2 4599 aa2.27□□□□□ -2.05
R3HDM1-220ENST00000628915 ACACBO00763 2458 aa2.27□□□□□ -2.05
R3HDM1-220ENST00000628915 MMP24-AS1A0A0U1RRL7 71 aa2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 A0A1W2PPR1 153 aa2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 LRRK2Q5S007 2527 aa2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 DYNC1H1Q14204 4646 aaKnown RBP2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 SPART-AS1P0CW21 52 aa2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 KRTAP9-7A8MTY7 169 aa2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 FASNP49327 2511 aaKnown RBP2.26□□□□□ -2.05
R3HDM1-220ENST00000628915 IGKV2-30P06310 120 aa2.25□□□□□ -2.05
R3HDM1-220ENST00000628915 KRTAP17-1Q9BYP8 105 aa2.25□□□□□ -2.05
R3HDM1-220ENST00000628915 A0A096LNI7 61 aa2.24□□□□□ -2.05
R3HDM1-220ENST00000628915 HERC2O95714 4834 aa2.24□□□□□ -2.05
R3HDM1-220ENST00000628915 PLAC4Q8WY50 150 aa2.24□□□□□ -2.05
R3HDM1-220ENST00000628915 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
R3HDM1-220ENST00000628915 APLNQ9ULZ1 77 aa2.24□□□□□ -2.05
R3HDM1-220ENST00000628915 BIRC6Q9NR09 4857 aa2.24□□□□□ -2.05
R3HDM1-220ENST00000628915 TLN2Q9Y4G6 2542 aa2.23□□□□□ -2.05
R3HDM1-220ENST00000628915 RYR1P21817 5038 aa2.23□□□□□ -2.05
R3HDM1-220ENST00000628915 CENPEQ02224 2701 aa2.23□□□□□ -2.05
R3HDM1-220ENST00000628915 LPAP08519 4548 aa2.23□□□□□ -2.05
R3HDM1-220ENST00000628915 LCE5AQ5TCM9 118 aa2.23□□□□□ -2.05
R3HDM1-220ENST00000628915 MYO18BQ8IUG5 2567 aa2.22□□□□□ -2.05
R3HDM1-220ENST00000628915 HELZ2Q9BYK8 2649 aaKnown RBP2.22□□□□□ -2.05
R3HDM1-220ENST00000628915 HECTD1Q9ULT8 2610 aa2.22□□□□□ -2.05
R3HDM1-220ENST00000628915 SPRR1BP22528 89 aa2.21□□□□□ -2.06
R3HDM1-220ENST00000628915 H3BNG1 76 aa2.21□□□□□ -2.06
R3HDM1-220ENST00000628915 SPINK6Q6UWN8 80 aa2.21□□□□□ -2.06
R3HDM1-220ENST00000628915 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
R3HDM1-220ENST00000628915 MAST4O15021 2626 aa2.2□□□□□ -2.06
R3HDM1-220ENST00000628915 ITPR2Q14571 2701 aa2.2□□□□□ -2.06
R3HDM1-220ENST00000628915 DEFB135Q30KP9 77 aa2.2□□□□□ -2.06
R3HDM1-220ENST00000628915 KRTAP9-3Q9BYQ3 159 aa2.2□□□□□ -2.06
R3HDM1-220ENST00000628915 USP9XQ93008 2570 aaPredicted RBP2.2□□□□□ -2.06
R3HDM1-220ENST00000628915 RPL37P61927 97 aaKnown RBP2.2□□□□□ -2.06
R3HDM1-220ENST00000628915 TGP01266 2768 aa2.2□□□□□ -2.06
R3HDM1-220ENST00000628915 DEFB4AO15263 64 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms