RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 PRO0461Q9UI25 63 aa8.71□□□□□ -1.02
LINC00628-201ENST00000628516 DEFB116Q30KQ4 102 aa8.68□□□□□ -1.02
LINC00628-201ENST00000628516 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
LINC00628-201ENST00000628516 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
LINC00628-201ENST00000628516 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
LINC00628-201ENST00000628516 C21orf62-AS1Q17RA5 79 aa8.67□□□□□ -1.02
LINC00628-201ENST00000628516 LINC00472Q9H8W2 130 aa8.67□□□□□ -1.02
LINC00628-201ENST00000628516 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
LINC00628-201ENST00000628516 M0R2T5 61 aa8.65□□□□□ -1.02
LINC00628-201ENST00000628516 A0A1B0GW54 56 aa8.64□□□□□ -1.03
LINC00628-201ENST00000628516 KRTAP10-6P60371 365 aaPredicted RBP8.63□□□□□ -1.03
LINC00628-201ENST00000628516 ATP11AUNQ6ZP68 121 aa8.63□□□□□ -1.03
LINC00628-201ENST00000628516 LORP23490 312 aaPredicted RBP8.62□□□□□ -1.03
LINC00628-201ENST00000628516 Q75L30 129 aa8.62□□□□□ -1.03
LINC00628-201ENST00000628516 F8W1H4 67 aa8.61□□□□□ -1.03
LINC00628-201ENST00000628516 DSCR10P59022 87 aa8.59□□□□□ -1.03
LINC00628-201ENST00000628516 NREPQ16612 68 aa8.57□□□□□ -1.04
LINC00628-201ENST00000628516 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
LINC00628-201ENST00000628516 J3KT08 172 aa8.56□□□□□ -1.04
LINC00628-201ENST00000628516 ETDBQ3ZM63 59 aa8.55□□□□□ -1.04
LINC00628-201ENST00000628516 A0A1B0GV90 55 aa8.54□□□□□ -1.04
LINC00628-201ENST00000628516 LINC00313P59037 77 aa8.54□□□□□ -1.04
LINC00628-201ENST00000628516 A0A1B0GVX0 72 aa8.53□□□□□ -1.04
LINC00628-201ENST00000628516 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
LINC00628-201ENST00000628516 C20orf166-AS1Q96NR2 134 aa8.51□□□□□ -1.05
LINC00628-201ENST00000628516 A8MUU9 505 aa8.49□□□□□ -1.05
LINC00628-201ENST00000628516 A8MWP4 228 aa8.49□□□□□ -1.05
LINC00628-201ENST00000628516 NDUFB1O75438 58 aa8.49□□□□□ -1.05
LINC00628-201ENST00000628516 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
LINC00628-201ENST00000628516 Q6ZVQ6 151 aa8.48□□□□□ -1.05
LINC00628-201ENST00000628516 IGKV3D-7A0A0C4DH55 119 aa8.47□□□□□ -1.05
LINC00628-201ENST00000628516 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
LINC00628-201ENST00000628516 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
LINC00628-201ENST00000628516 BPY2O14599 106 aa8.44□□□□□ -1.06
LINC00628-201ENST00000628516 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
LINC00628-201ENST00000628516 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
LINC00628-201ENST00000628516 C8orf17Q9NRJ1 99 aa8.42□□□□□ -1.06
LINC00628-201ENST00000628516 K7EQZ3 153 aa8.4□□□□□ -1.06
LINC00628-201ENST00000628516 Q8N9L7 120 aa8.36□□□□□ -1.07
LINC00628-201ENST00000628516 MMP24-AS1A0A0U1RRL7 71 aa8.35□□□□□ -1.07
LINC00628-201ENST00000628516 Q8N9P0 234 aaPredicted RBP8.31□□□□□ -1.08
LINC00628-201ENST00000628516 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
LINC00628-201ENST00000628516 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
LINC00628-201ENST00000628516 ACYP1P07311 99 aa8.3□□□□□ -1.08
LINC00628-201ENST00000628516 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
LINC00628-201ENST00000628516 TMEM254Q8TBM7 123 aa8.3□□□□□ -1.08
LINC00628-201ENST00000628516 FAM240AA0A1B0GVK7 77 aa8.29□□□□□ -1.08
LINC00628-201ENST00000628516 MRPL34Q9BQ48 92 aaKnown RBP8.29□□□□□ -1.08
LINC00628-201ENST00000628516 WFDC13Q8IUB5 93 aa8.28□□□□□ -1.08
LINC00628-201ENST00000628516 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
LINC00628-201ENST00000628516 ZCCHC13Q8WW36 166 aaKnown RBP8.27□□□□□ -1.09
LINC00628-201ENST00000628516 CXCL6P80162 114 aa8.26□□□□□ -1.09
LINC00628-201ENST00000628516 KRTAP9-7A8MTY7 169 aa8.25□□□□□ -1.09
LINC00628-201ENST00000628516 CASC2Q6XLA1 102 aa8.25□□□□□ -1.09
LINC00628-201ENST00000628516 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
LINC00628-201ENST00000628516 NDUFS5O43920 106 aa8.24□□□□□ -1.09
LINC00628-201ENST00000628516 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.23□□□□□ -1.09
LINC00628-201ENST00000628516 HRES1P13985 223 aa8.23□□□□□ -1.09
LINC00628-201ENST00000628516 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
LINC00628-201ENST00000628516 MPLKIPQ8TAP9 179 aa8.21□□□□□ -1.1
LINC00628-201ENST00000628516 USH2AO75445 5202 aa8.21□□□□□ -1.1
LINC00628-201ENST00000628516 ATP5EP2Q5VTU8 51 aa8.17□□□□□ -1.1
LINC00628-201ENST00000628516 SSPOA2VEC9 5147 aa8.17□□□□□ -1.1
LINC00628-201ENST00000628516 J3QR89 54 aa8.16□□□□□ -1.1
LINC00628-201ENST00000628516 MT2AP02795 61 aa8.15□□□□□ -1.1
LINC00628-201ENST00000628516 LINC00643Q86TS7 51 aa8.14□□□□□ -1.11
LINC00628-201ENST00000628516 SPINK7P58062 85 aa8.13□□□□□ -1.11
LINC00628-201ENST00000628516 HIST1H4AP62805 103 aaKnown RBP8.11□□□□□ -1.11
LINC00628-201ENST00000628516 Q5W150 140 aa8.11□□□□□ -1.11
LINC00628-201ENST00000628516 MT1FP04733 61 aa8.09□□□□□ -1.11
LINC00628-201ENST00000628516 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
LINC00628-201ENST00000628516 A0A087WVE0 104 aa8.04□□□□□ -1.12
LINC00628-201ENST00000628516 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
LINC00628-201ENST00000628516 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
LINC00628-201ENST00000628516 LCE2BO14633 110 aa8.02□□□□□ -1.13
LINC00628-201ENST00000628516 KRTAP9-3Q9BYQ3 159 aa8.02□□□□□ -1.13
LINC00628-201ENST00000628516 TP53AIP1Q9HCN2 124 aa8.02□□□□□ -1.13
LINC00628-201ENST00000628516 FCGBPQ9Y6R7 5405 aaPredicted RBP8.02□□□□□ -1.13
LINC00628-201ENST00000628516 K7ERU9 68 aa8□□□□□ -1.13
LINC00628-201ENST00000628516 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
LINC00628-201ENST00000628516 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
LINC00628-201ENST00000628516 UQCRQO14949 82 aa7.9□□□□□ -1.14
LINC00628-201ENST00000628516 TRAV22A0A0B4J277 110 aa7.89□□□□□ -1.15
LINC00628-201ENST00000628516 MT-ATP8P03928 68 aa7.89□□□□□ -1.15
LINC00628-201ENST00000628516 SYNE2Q8WXH0 6885 aaKnown RBP7.87□□□□□ -1.15
LINC00628-201ENST00000628516 C4orf26Q17RF5 130 aa7.85□□□□□ -1.15
LINC00628-201ENST00000628516 H0Y9P7 68 aa7.84□□□□□ -1.15
LINC00628-201ENST00000628516 H1FX-AS1Q4G0G2 97 aa7.83□□□□□ -1.16
LINC00628-201ENST00000628516 IMUPQ9GZP8 106 aa7.83□□□□□ -1.16
LINC00628-201ENST00000628516 MACF1Q9UPN3 7388 aaKnown RBP7.83□□□□□ -1.16
LINC00628-201ENST00000628516 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
LINC00628-201ENST00000628516 OCR1Q9BZK8 76 aa7.82□□□□□ -1.16
LINC00628-201ENST00000628516 CYP4F30PQ9H0H9 118 aa7.82□□□□□ -1.16
LINC00628-201ENST00000628516 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
LINC00628-201ENST00000628516 ATOX1O00244 68 aa7.8□□□□□ -1.16
LINC00628-201ENST00000628516 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
LINC00628-201ENST00000628516 C1orf64Q8NEQ6 169 aa7.75□□□□□ -1.17
LINC00628-201ENST00000628516 MP68P56378 58 aa7.74□□□□□ -1.17
LINC00628-201ENST00000628516 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
LINC00628-201ENST00000628516 FAM236AA0A1B0GUQ0 79 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms