RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 NREPQ16612 68 aa10.9□□□□□ -0.66
R3HCC1-210ENST00000625275 LINC00846Q9NV44 126 aa10.88□□□□□ -0.67
R3HCC1-210ENST00000625275 C9orf92A6NGG3 77 aa10.87□□□□□ -0.67
R3HCC1-210ENST00000625275 Q6ZVQ6 151 aa10.86□□□□□ -0.67
R3HCC1-210ENST00000625275 J3KT08 172 aa10.85□□□□□ -0.67
R3HCC1-210ENST00000625275 UBL5Q9BZL1 73 aa10.81□□□□□ -0.68
R3HCC1-210ENST00000625275 FAM240AA0A1B0GVK7 77 aa10.79□□□□□ -0.68
R3HCC1-210ENST00000625275 ACYP1P07311 99 aa10.78□□□□□ -0.68
R3HCC1-210ENST00000625275 A0A1B0GVX0 72 aa10.77□□□□□ -0.69
R3HCC1-210ENST00000625275 A8MWP4 228 aa10.77□□□□□ -0.69
R3HCC1-210ENST00000625275 IGHV6-1A0A0B4J1U7 121 aa10.76□□□□□ -0.69
R3HCC1-210ENST00000625275 BPY2O14599 106 aa10.76□□□□□ -0.69
R3HCC1-210ENST00000625275 DSCR10P59022 87 aa10.76□□□□□ -0.69
R3HCC1-210ENST00000625275 IGKV3D-7A0A0C4DH55 119 aa10.74□□□□□ -0.69
R3HCC1-210ENST00000625275 NOTCH2NLQ7Z3S9 236 aa10.74□□□□□ -0.69
R3HCC1-210ENST00000625275 NDUFB1O75438 58 aa10.74□□□□□ -0.69
R3HCC1-210ENST00000625275 PCOTHQ58A44 107 aa10.74□□□□□ -0.69
R3HCC1-210ENST00000625275 LINC00313P59037 77 aa10.72□□□□□ -0.69
R3HCC1-210ENST00000625275 K7EQZ3 153 aa10.7□□□□□ -0.7
R3HCC1-210ENST00000625275 PRR15Q8IV56 129 aa10.7□□□□□ -0.7
R3HCC1-210ENST00000625275 C8orf87E5RJ46 101 aa10.68□□□□□ -0.7
R3HCC1-210ENST00000625275 J3QR89 54 aa10.68□□□□□ -0.7
R3HCC1-210ENST00000625275 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
R3HCC1-210ENST00000625275 KRTAP9-6A0A140TA67 174 aa10.68□□□□□ -0.7
R3HCC1-210ENST00000625275 KRTAP16-1A8MUX0 517 aa10.67□□□□□ -0.7
R3HCC1-210ENST00000625275 Q8N9L7 120 aa10.67□□□□□ -0.7
R3HCC1-210ENST00000625275 KRTAP19-2Q3LHN2 52 aa10.66□□□□□ -0.7
R3HCC1-210ENST00000625275 C8orf17Q9NRJ1 99 aa10.65□□□□□ -0.7
R3HCC1-210ENST00000625275 CXCL6P80162 114 aa10.63□□□□□ -0.71
R3HCC1-210ENST00000625275 RPL37P61927 97 aaKnown RBP10.62□□□□□ -0.71
R3HCC1-210ENST00000625275 K7ERU9 68 aa10.61□□□□□ -0.71
R3HCC1-210ENST00000625275 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
R3HCC1-210ENST00000625275 Q75L30 129 aa10.61□□□□□ -0.71
R3HCC1-210ENST00000625275 MMP24-AS1A0A0U1RRL7 71 aa10.6□□□□□ -0.71
R3HCC1-210ENST00000625275 A8MUU9 505 aa10.59□□□□□ -0.71
R3HCC1-210ENST00000625275 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
R3HCC1-210ENST00000625275 MT1HP80294 61 aa10.56□□□□□ -0.72
R3HCC1-210ENST00000625275 ATP5EP2Q5VTU8 51 aa10.56□□□□□ -0.72
R3HCC1-210ENST00000625275 LINC00643Q86TS7 51 aa10.56□□□□□ -0.72
R3HCC1-210ENST00000625275 hDV103S1A0JD37 113 aa10.53□□□□□ -0.72
R3HCC1-210ENST00000625275 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
R3HCC1-210ENST00000625275 TMEM254Q8TBM7 123 aa10.51□□□□□ -0.73
R3HCC1-210ENST00000625275 WFDC13Q8IUB5 93 aa10.5□□□□□ -0.73
R3HCC1-210ENST00000625275 MRPL34Q9BQ48 92 aaKnown RBP10.49□□□□□ -0.73
R3HCC1-210ENST00000625275 CASC2Q6XLA1 102 aa10.49□□□□□ -0.73
R3HCC1-210ENST00000625275 ATP11AUNQ6ZP68 121 aa10.49□□□□□ -0.73
R3HCC1-210ENST00000625275 HCG22E2RYF7 251 aa10.48□□□□□ -0.73
R3HCC1-210ENST00000625275 HIST1H4AP62805 103 aaKnown RBP10.44□□□□□ -0.74
R3HCC1-210ENST00000625275 COX6B2Q6YFQ2 88 aa10.42□□□□□ -0.74
R3HCC1-210ENST00000625275 NDUFS5O43920 106 aa10.39□□□□□ -0.75
R3HCC1-210ENST00000625275 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
R3HCC1-210ENST00000625275 KRTAP10-6P60371 365 aaPredicted RBP10.38□□□□□ -0.75
R3HCC1-210ENST00000625275 A0A087WVE0 104 aa10.37□□□□□ -0.75
R3HCC1-210ENST00000625275 ZCCHC13Q8WW36 166 aaKnown RBP10.37□□□□□ -0.75
R3HCC1-210ENST00000625275 M0R2T5 61 aa10.36□□□□□ -0.75
R3HCC1-210ENST00000625275 CRCT1Q9UGL9 99 aa10.36□□□□□ -0.75
R3HCC1-210ENST00000625275 PCP4P48539 62 aa10.33□□□□□ -0.76
R3HCC1-210ENST00000625275 FLGP20930 4061 aaPredicted RBP10.31□□□□□ -0.76
R3HCC1-210ENST00000625275 MT-ATP8P03928 68 aa10.31□□□□□ -0.76
R3HCC1-210ENST00000625275 FSIP2Q5CZC0 6907 aa10.3□□□□□ -0.76
R3HCC1-210ENST00000625275 Q5W150 140 aa10.27□□□□□ -0.77
R3HCC1-210ENST00000625275 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
R3HCC1-210ENST00000625275 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
R3HCC1-210ENST00000625275 SCGB1A1P11684 91 aa10.23□□□□□ -0.77
R3HCC1-210ENST00000625275 SPINK7P58062 85 aa10.17□□□□□ -0.78
R3HCC1-210ENST00000625275 HRES1P13985 223 aa10.11□□□□□ -0.79
R3HCC1-210ENST00000625275 IGKV2D-30A0A075B6S6 120 aa10.1□□□□□ -0.79
R3HCC1-210ENST00000625275 UQCRQO14949 82 aa10.1□□□□□ -0.79
R3HCC1-210ENST00000625275 IGKV2-30P06310 120 aa10.1□□□□□ -0.79
R3HCC1-210ENST00000625275 OCR1Q9BZK8 76 aa10.1□□□□□ -0.79
R3HCC1-210ENST00000625275 TRAV22A0A0B4J277 110 aa10.1□□□□□ -0.79
R3HCC1-210ENST00000625275 FAM236AA0A1B0GUQ0 79 aa10.08□□□□□ -0.8
R3HCC1-210ENST00000625275 FAM236BA0A1B0GV22 79 aa10.08□□□□□ -0.8
R3HCC1-210ENST00000625275 C7orf65Q6ZTY9 151 aa10.08□□□□□ -0.8
R3HCC1-210ENST00000625275 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
R3HCC1-210ENST00000625275 H0Y9P7 68 aa10.02□□□□□ -0.81
R3HCC1-210ENST00000625275 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
R3HCC1-210ENST00000625275 ATOX1O00244 68 aa9.98□□□□□ -0.81
R3HCC1-210ENST00000625275 KRTAP9-8Q9BYQ0 159 aa9.97□□□□□ -0.81
R3HCC1-210ENST00000625275 LOC101927531A0A1B0GV80 90 aa9.96□□□□□ -0.82
R3HCC1-210ENST00000625275 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
R3HCC1-210ENST00000625275 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
R3HCC1-210ENST00000625275 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
R3HCC1-210ENST00000625275 CYP4F30PQ9H0H9 118 aa9.95□□□□□ -0.82
R3HCC1-210ENST00000625275 MP68P56378 58 aa9.93□□□□□ -0.82
R3HCC1-210ENST00000625275 SMIM20Q8N5G0 67 aa9.93□□□□□ -0.82
R3HCC1-210ENST00000625275 C1orf64Q8NEQ6 169 aa9.91□□□□□ -0.82
R3HCC1-210ENST00000625275 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
R3HCC1-210ENST00000625275 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
R3HCC1-210ENST00000625275 C4orf26Q17RF5 130 aa9.88□□□□□ -0.83
R3HCC1-210ENST00000625275 H3BPC8 53 aa9.85□□□□□ -0.83
R3HCC1-210ENST00000625275 MT2AP02795 61 aa9.82□□□□□ -0.84
R3HCC1-210ENST00000625275 ANAPC13Q9BS18 74 aa9.81□□□□□ -0.84
R3HCC1-210ENST00000625275 KLKP1Q107X0 134 aa9.79□□□□□ -0.84
R3HCC1-210ENST00000625275 SERP2Q8N6R1 65 aa9.79□□□□□ -0.84
R3HCC1-210ENST00000625275 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
R3HCC1-210ENST00000625275 MT1FP04733 61 aa9.74□□□□□ -0.85
R3HCC1-210ENST00000625275 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
R3HCC1-210ENST00000625275 USH2AO75445 5202 aa9.73□□□□□ -0.85
R3HCC1-210ENST00000625275 KRTAP10-10P60014 251 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms