RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
CPNE4-214ENST00000617767 REG3GQ6UW15 175 aa3.44□□□□□ -1.86
CPNE4-214ENST00000617767 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
CPNE4-214ENST00000617767 LINC00528Q8N1L1 170 aa3.44□□□□□ -1.86
CPNE4-214ENST00000617767 P0C880 135 aa3.43□□□□□ -1.86
CPNE4-214ENST00000617767 NUPR2A6NF83 97 aa3.43□□□□□ -1.86
CPNE4-214ENST00000617767 H3BPC8 53 aa3.43□□□□□ -1.86
CPNE4-214ENST00000617767 HRES1P13985 223 aa3.42□□□□□ -1.86
CPNE4-214ENST00000617767 DNAH5Q8TE73 4624 aa3.42□□□□□ -1.86
CPNE4-214ENST00000617767 A0A087X002 238 aa3.42□□□□□ -1.86
CPNE4-214ENST00000617767 C1orf137Q5JT78 98 aa3.42□□□□□ -1.86
CPNE4-214ENST00000617767 RPL37AP61513 92 aaKnown RBP3.41□□□□□ -1.86
CPNE4-214ENST00000617767 Q6ZRX8 168 aa3.41□□□□□ -1.86
CPNE4-214ENST00000617767 Q8N377 158 aa3.41□□□□□ -1.86
CPNE4-214ENST00000617767 PKHD1P08F94 4074 aa3.41□□□□□ -1.86
CPNE4-214ENST00000617767 Q8NBF4 154 aa3.41□□□□□ -1.86
CPNE4-214ENST00000617767 IGLV5-48A0A075B6I7 105 aa3.41□□□□□ -1.86
CPNE4-214ENST00000617767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.41□□□□□ -1.86
CPNE4-214ENST00000617767 J3QL48 77 aa3.4□□□□□ -1.87
CPNE4-214ENST00000617767 TLX1NBP0CAT3 122 aa3.4□□□□□ -1.87
CPNE4-214ENST00000617767 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.87
CPNE4-214ENST00000617767 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
CPNE4-214ENST00000617767 KRTAP29-1A8MX34 341 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-214ENST00000617767 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
CPNE4-214ENST00000617767 ANAPC11Q9NYG5 84 aa3.38□□□□□ -1.87
CPNE4-214ENST00000617767 Q6ZRN7 208 aaPredicted RBP3.38□□□□□ -1.87
CPNE4-214ENST00000617767 A0A1B0GW54 56 aa3.38□□□□□ -1.87
CPNE4-214ENST00000617767 KRTAP4-16G5E9R7 235 aaPredicted RBP3.38□□□□□ -1.87
CPNE4-214ENST00000617767 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
CPNE4-214ENST00000617767 A0A087WTM6 91 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 ZNF861PO60384 105 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 TNP2Q05952 138 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 SPRR4Q96PI1 79 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 DHRS4-AS1Q9P1J3 65 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 SACSQ9NZJ4 4579 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 C14orf177Q52M58 125 aa3.37□□□□□ -1.87
CPNE4-214ENST00000617767 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
CPNE4-214ENST00000617767 IGLV9-49A0A0B4J1Y8 123 aa3.36□□□□□ -1.87
CPNE4-214ENST00000617767 IGLV5-52A0A0A0MRZ9 124 aa3.36□□□□□ -1.87
CPNE4-214ENST00000617767 A8MWP4 228 aa3.36□□□□□ -1.87
CPNE4-214ENST00000617767 PLA2G2DQ9UNK4 145 aa3.36□□□□□ -1.87
CPNE4-214ENST00000617767 A0A1B0GU69 56 aa3.35□□□□□ -1.87
CPNE4-214ENST00000617767 SPRR1AP35321 89 aa3.35□□□□□ -1.87
CPNE4-214ENST00000617767 PKD1P98161 4303 aa3.34□□□□□ -1.87
CPNE4-214ENST00000617767 FLG2Q5D862 2391 aaPredicted RBP3.34□□□□□ -1.87
CPNE4-214ENST00000617767 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
CPNE4-214ENST00000617767 KRTAP10-2P60368 255 aa3.34□□□□□ -1.87
CPNE4-214ENST00000617767 ALMS1Q8TCU4 4167 aa3.34□□□□□ -1.87
CPNE4-214ENST00000617767 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.88
CPNE4-214ENST00000617767 A0A087WSZ3 146 aa3.34□□□□□ -1.88
CPNE4-214ENST00000617767 LINC00483Q53H64 154 aa3.33□□□□□ -1.88
CPNE4-214ENST00000617767 FAT1Q14517 4588 aa3.33□□□□□ -1.88
CPNE4-214ENST00000617767 A8MUU9 505 aa3.33□□□□□ -1.88
CPNE4-214ENST00000617767 UQCR11O14957 56 aa3.33□□□□□ -1.88
CPNE4-214ENST00000617767 IGFL1Q6UW32 110 aa3.33□□□□□ -1.88
CPNE4-214ENST00000617767 PSORS1C2Q9UIG4 136 aa3.32□□□□□ -1.88
CPNE4-214ENST00000617767 SPACA4Q8TDM5 124 aa3.32□□□□□ -1.88
CPNE4-214ENST00000617767 CRIPTQ9P021 101 aa3.32□□□□□ -1.88
CPNE4-214ENST00000617767 WWC2-AS2Q96NR7 200 aa3.31□□□□□ -1.88
CPNE4-214ENST00000617767 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
CPNE4-214ENST00000617767 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
CPNE4-214ENST00000617767 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
CPNE4-214ENST00000617767 CIRBP-AS1Q8TBR5 109 aa3.29□□□□□ -1.88
CPNE4-214ENST00000617767 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.88
CPNE4-214ENST00000617767 LCE2BO14633 110 aa3.28□□□□□ -1.88
CPNE4-214ENST00000617767 LINC00472Q9H8W2 130 aa3.28□□□□□ -1.88
CPNE4-214ENST00000617767 MMP24-AS1A0A0U1RRL7 71 aa3.27□□□□□ -1.89
CPNE4-214ENST00000617767 KRTAP10-1P60331 282 aa3.27□□□□□ -1.89
CPNE4-214ENST00000617767 SPINK6Q6UWN8 80 aa3.27□□□□□ -1.89
CPNE4-214ENST00000617767 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
CPNE4-214ENST00000617767 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
CPNE4-214ENST00000617767 ACYP2P14621 99 aa3.26□□□□□ -1.89
CPNE4-214ENST00000617767 RYR3Q15413 4870 aa3.25□□□□□ -1.89
CPNE4-214ENST00000617767 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
CPNE4-214ENST00000617767 KRTAP13-1Q8IUC0 172 aa3.25□□□□□ -1.89
CPNE4-214ENST00000617767 TP53AIP1Q9HCN2 124 aa3.25□□□□□ -1.89
CPNE4-214ENST00000617767 RYR2Q92736 4967 aa3.24□□□□□ -1.89
CPNE4-214ENST00000617767 LINC00304Q8N9R0 145 aa3.24□□□□□ -1.89
CPNE4-214ENST00000617767 SSBP3-AS1Q7Z2R9 100 aa3.23□□□□□ -1.89
CPNE4-214ENST00000617767 IGLV7-43P04211 117 aa3.23□□□□□ -1.89
CPNE4-214ENST00000617767 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
CPNE4-214ENST00000617767 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
CPNE4-214ENST00000617767 APOBP04114 4563 aaKnown RBP3.23□□□□□ -1.89
CPNE4-214ENST00000617767 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
CPNE4-214ENST00000617767 DMBT1Q9UGM3 2413 aaPredicted RBP3.2□□□□□ -1.9
CPNE4-214ENST00000617767 CDK2AP2O75956 126 aa3.2□□□□□ -1.9
CPNE4-214ENST00000617767 SPRR1BP22528 89 aa3.2□□□□□ -1.9
CPNE4-214ENST00000617767 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
CPNE4-214ENST00000617767 Q5W150 140 aa3.18□□□□□ -1.9
CPNE4-214ENST00000617767 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
CPNE4-214ENST00000617767 KIAA1109Q2LD37 5005 aa3.17□□□□□ -1.9
CPNE4-214ENST00000617767 Q96NJ1 140 aa3.17□□□□□ -1.9
CPNE4-214ENST00000617767 K7ERS5 55 aa3.16□□□□□ -1.9
CPNE4-214ENST00000617767 KRTAP13-2Q52LG2 175 aa3.16□□□□□ -1.9
CPNE4-214ENST00000617767 SEC61BP60468 96 aaKnown RBP3.16□□□□□ -1.9
CPNE4-214ENST00000617767 MRPL34Q9BQ48 92 aaKnown RBP3.16□□□□□ -1.9
CPNE4-214ENST00000617767 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.9
CPNE4-214ENST00000617767 H0YAA0 97 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms