RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
TARDBP-218ENST00000617172 DEFB116Q30KQ4 102 aa4.91□□□□□ -1.62
TARDBP-218ENST00000617172 J3KT08 172 aa4.9□□□□□ -1.63
TARDBP-218ENST00000617172 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
TARDBP-218ENST00000617172 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
TARDBP-218ENST00000617172 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.63
TARDBP-218ENST00000617172 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
TARDBP-218ENST00000617172 C9JAW5 83 aa4.89□□□□□ -1.63
TARDBP-218ENST00000617172 BAALC-AS2P0C853 105 aa4.89□□□□□ -1.63
TARDBP-218ENST00000617172 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
TARDBP-218ENST00000617172 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
TARDBP-218ENST00000617172 A0A1B0GW54 56 aa4.87□□□□□ -1.63
TARDBP-218ENST00000617172 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
TARDBP-218ENST00000617172 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
TARDBP-218ENST00000617172 JMJD7-PLA2G4BH0Y9G9 81 aa4.86□□□□□ -1.63
TARDBP-218ENST00000617172 NDUFB1O75438 58 aa4.86□□□□□ -1.63
TARDBP-218ENST00000617172 Q6ZQT0 140 aa4.86□□□□□ -1.63
TARDBP-218ENST00000617172 MTURNQ8N3F0 131 aa4.86□□□□□ -1.63
TARDBP-218ENST00000617172 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
TARDBP-218ENST00000617172 M0R143 59 aa4.85□□□□□ -1.63
TARDBP-218ENST00000617172 HRES1P13985 223 aa4.85□□□□□ -1.63
TARDBP-218ENST00000617172 PDE6GP18545 87 aa4.84□□□□□ -1.63
TARDBP-218ENST00000617172 ATXN8Q156A1 80 aa4.84□□□□□ -1.63
TARDBP-218ENST00000617172 ZCCHC13Q8WW36 166 aaKnown RBP4.83□□□□□ -1.64
TARDBP-218ENST00000617172 LOC110117498A0A087WWA1 95 aa4.81□□□□□ -1.64
TARDBP-218ENST00000617172 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
TARDBP-218ENST00000617172 A8MWP4 228 aa4.8□□□□□ -1.64
TARDBP-218ENST00000617172 SPINK7P58062 85 aa4.8□□□□□ -1.64
TARDBP-218ENST00000617172 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
TARDBP-218ENST00000617172 MT2AP02795 61 aa4.78□□□□□ -1.64
TARDBP-218ENST00000617172 C8orf17Q9NRJ1 99 aa4.78□□□□□ -1.64
TARDBP-218ENST00000617172 IGKV3D-7A0A0C4DH55 119 aa4.76□□□□□ -1.65
TARDBP-218ENST00000617172 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
TARDBP-218ENST00000617172 NREPQ16612 68 aa4.76□□□□□ -1.65
TARDBP-218ENST00000617172 Q6ZVQ6 151 aa4.76□□□□□ -1.65
TARDBP-218ENST00000617172 NAA38Q9BRA0 125 aaKnown RBP4.76□□□□□ -1.65
TARDBP-218ENST00000617172 C14orf132Q9NPU4 83 aa4.76□□□□□ -1.65
TARDBP-218ENST00000617172 SMIM6P0DI80 62 aa4.75□□□□□ -1.65
TARDBP-218ENST00000617172 PRR15Q8IV56 129 aa4.75□□□□□ -1.65
TARDBP-218ENST00000617172 MT1FP04733 61 aa4.74□□□□□ -1.65
TARDBP-218ENST00000617172 TSTD3H0UI37 97 aa4.73□□□□□ -1.65
TARDBP-218ENST00000617172 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
TARDBP-218ENST00000617172 TMEM254Q8TBM7 123 aa4.72□□□□□ -1.65
TARDBP-218ENST00000617172 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
TARDBP-218ENST00000617172 WFDC13Q8IUB5 93 aa4.71□□□□□ -1.66
TARDBP-218ENST00000617172 MRPL34Q9BQ48 92 aaKnown RBP4.71□□□□□ -1.66
TARDBP-218ENST00000617172 H3BT86 120 aa4.7□□□□□ -1.66
TARDBP-218ENST00000617172 hDV103S1A0JD37 113 aa4.69□□□□□ -1.66
TARDBP-218ENST00000617172 BATFQ16520 125 aa4.69□□□□□ -1.66
TARDBP-218ENST00000617172 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
TARDBP-218ENST00000617172 C9orf118A6NHY6 69 aa4.68□□□□□ -1.66
TARDBP-218ENST00000617172 A0A1W2PPM0 123 aa4.66□□□□□ -1.66
TARDBP-218ENST00000617172 K7EQZ3 153 aa4.66□□□□□ -1.66
TARDBP-218ENST00000617172 BPY2O14599 106 aa4.66□□□□□ -1.66
TARDBP-218ENST00000617172 NDUFS5O43920 106 aa4.66□□□□□ -1.66
TARDBP-218ENST00000617172 LINC00846Q9NV44 126 aa4.66□□□□□ -1.66
TARDBP-218ENST00000617172 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
TARDBP-218ENST00000617172 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.67
TARDBP-218ENST00000617172 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
TARDBP-218ENST00000617172 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
TARDBP-218ENST00000617172 TAX1BP3O14907 124 aa4.63□□□□□ -1.67
TARDBP-218ENST00000617172 USH2AO75445 5202 aa4.62□□□□□ -1.67
TARDBP-218ENST00000617172 C7orf65Q6ZTY9 151 aa4.61□□□□□ -1.67
TARDBP-218ENST00000617172 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
TARDBP-218ENST00000617172 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
TARDBP-218ENST00000617172 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
TARDBP-218ENST00000617172 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
TARDBP-218ENST00000617172 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
TARDBP-218ENST00000617172 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
TARDBP-218ENST00000617172 Q5W150 140 aa4.59□□□□□ -1.67
TARDBP-218ENST00000617172 SPCS1Q9Y6A9 102 aa4.59□□□□□ -1.67
TARDBP-218ENST00000617172 CXCL6P80162 114 aa4.58□□□□□ -1.68
TARDBP-218ENST00000617172 HCG22E2RYF7 251 aa4.57□□□□□ -1.68
TARDBP-218ENST00000617172 KRTAP19-6Q3LI70 58 aa4.57□□□□□ -1.68
TARDBP-218ENST00000617172 UBL5Q9BZL1 73 aa4.57□□□□□ -1.68
TARDBP-218ENST00000617172 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
TARDBP-218ENST00000617172 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
TARDBP-218ENST00000617172 Q8N9L7 120 aa4.56□□□□□ -1.68
TARDBP-218ENST00000617172 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
TARDBP-218ENST00000617172 C4orf26Q17RF5 130 aa4.53□□□□□ -1.68
TARDBP-218ENST00000617172 COL5A1-AS1Q5SY13 56 aa4.53□□□□□ -1.68
TARDBP-218ENST00000617172 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
TARDBP-218ENST00000617172 PRO0461Q9UI25 63 aa4.5□□□□□ -1.69
TARDBP-218ENST00000617172 K7EP34 96 aa4.49□□□□□ -1.69
TARDBP-218ENST00000617172 TP53AIP1Q9HCN2 124 aa4.49□□□□□ -1.69
TARDBP-218ENST00000617172 C5orf47Q569G3 176 aa4.46□□□□□ -1.7
TARDBP-218ENST00000617172 CSAG1Q6PB30 78 aa4.46□□□□□ -1.7
TARDBP-218ENST00000617172 GTF2H5Q6ZYL4 71 aa4.46□□□□□ -1.7
TARDBP-218ENST00000617172 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
TARDBP-218ENST00000617172 F8W1H4 67 aa4.45□□□□□ -1.7
TARDBP-218ENST00000617172 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
TARDBP-218ENST00000617172 S4R3F8 94 aa4.45□□□□□ -1.7
TARDBP-218ENST00000617172 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
TARDBP-218ENST00000617172 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
TARDBP-218ENST00000617172 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
TARDBP-218ENST00000617172 LCA10Q71F78 164 aa4.41□□□□□ -1.7
TARDBP-218ENST00000617172 ETDBQ3ZM63 59 aa4.4□□□□□ -1.71
TARDBP-218ENST00000617172 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
TARDBP-218ENST00000617172 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
TARDBP-218ENST00000617172 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms