RNA–Protein interactions for RNA: ENST00000617161.1

CA9-204, Transcript of carbonic anhydrase 9, humanhuman

TSL 1 (best) BASIC

Gene CA9, Length 1,374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA9-204ENST00000617161 A0A1W2PPM0 123 aa11.75□□□□□ -0.53
CA9-204ENST00000617161 A0A1B0GVX0 72 aa11.74□□□□□ -0.53
CA9-204ENST00000617161 C21orf62-AS1Q17RA5 79 aa11.73□□□□□ -0.53
CA9-204ENST00000617161 COX6B2Q6YFQ2 88 aa11.72□□□□□ -0.53
CA9-204ENST00000617161 PDE6GP18545 87 aa11.7□□□□□ -0.54
CA9-204ENST00000617161 MTURNQ8N3F0 131 aa11.7□□□□□ -0.54
CA9-204ENST00000617161 A0A1B0GW54 56 aa11.69□□□□□ -0.54
CA9-204ENST00000617161 J3KT08 172 aa11.68□□□□□ -0.54
CA9-204ENST00000617161 C8orf87E5RJ46 101 aa11.67□□□□□ -0.54
CA9-204ENST00000617161 H3BT86 120 aa11.67□□□□□ -0.54
CA9-204ENST00000617161 LORP23490 312 aaPredicted RBP11.64□□□□□ -0.55
CA9-204ENST00000617161 KRTAP10-6P60371 365 aaPredicted RBP11.63□□□□□ -0.55
CA9-204ENST00000617161 A8MWP4 228 aa11.59□□□□□ -0.55
CA9-204ENST00000617161 IGKV3D-7A0A0C4DH55 119 aa11.58□□□□□ -0.56
CA9-204ENST00000617161 SPCS1Q9Y6A9 102 aa11.58□□□□□ -0.56
CA9-204ENST00000617161 PCP4L1A6NKN8 68 aa11.57□□□□□ -0.56
CA9-204ENST00000617161 M0R2T5 61 aa11.57□□□□□ -0.56
CA9-204ENST00000617161 LCE2DQ5TA82 110 aaPredicted RBP11.57□□□□□ -0.56
CA9-204ENST00000617161 NDUFB1O75438 58 aa11.56□□□□□ -0.56
CA9-204ENST00000617161 SMCPP49901 116 aaPredicted RBP11.54□□□□□ -0.56
CA9-204ENST00000617161 NREPQ16612 68 aa11.54□□□□□ -0.56
CA9-204ENST00000617161 C8orf17Q9NRJ1 99 aa11.54□□□□□ -0.56
CA9-204ENST00000617161 Q8N9P0 234 aaPredicted RBP11.54□□□□□ -0.56
CA9-204ENST00000617161 COL5A1-AS1Q5SY13 56 aa11.53□□□□□ -0.56
CA9-204ENST00000617161 HRES1P13985 223 aa11.51□□□□□ -0.57
CA9-204ENST00000617161 PRR15Q8IV56 129 aa11.5□□□□□ -0.57
CA9-204ENST00000617161 MPLKIPQ8TAP9 179 aa11.5□□□□□ -0.57
CA9-204ENST00000617161 ZCCHC13Q8WW36 166 aaKnown RBP11.49□□□□□ -0.57
CA9-204ENST00000617161 PRO0461Q9UI25 63 aa11.47□□□□□ -0.57
CA9-204ENST00000617161 Q6ZVQ6 151 aa11.44□□□□□ -0.58
CA9-204ENST00000617161 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
CA9-204ENST00000617161 K7EP34 96 aa11.42□□□□□ -0.58
CA9-204ENST00000617161 K7EQZ3 153 aa11.42□□□□□ -0.58
CA9-204ENST00000617161 KRTAP9-6A0A140TA67 174 aa11.37□□□□□ -0.59
CA9-204ENST00000617161 SPINK7P58062 85 aa11.37□□□□□ -0.59
CA9-204ENST00000617161 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
CA9-204ENST00000617161 BPY2O14599 106 aa11.35□□□□□ -0.59
CA9-204ENST00000617161 MRPL34Q9BQ48 92 aaKnown RBP11.35□□□□□ -0.59
CA9-204ENST00000617161 RBM12B-AS1Q9P1G2 102 aa11.35□□□□□ -0.59
CA9-204ENST00000617161 FAM236DA0A1B0GTK5 79 aa11.34□□□□□ -0.59
CA9-204ENST00000617161 FAM236CP0DP71 79 aa11.34□□□□□ -0.59
CA9-204ENST00000617161 FSIP2Q5CZC0 6907 aa11.33□□□□□ -0.6
CA9-204ENST00000617161 hDV103S1A0JD37 113 aa11.32□□□□□ -0.6
CA9-204ENST00000617161 Q8N9L7 120 aa11.3□□□□□ -0.6
CA9-204ENST00000617161 KRTAP9-8Q9BYQ0 159 aa11.29□□□□□ -0.6
CA9-204ENST00000617161 LINC00846Q9NV44 126 aa11.28□□□□□ -0.6
CA9-204ENST00000617161 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
CA9-204ENST00000617161 NDUFS5O43920 106 aa11.2□□□□□ -0.62
CA9-204ENST00000617161 WFDC13Q8IUB5 93 aa11.2□□□□□ -0.62
CA9-204ENST00000617161 CRCT1Q9UGL9 99 aa11.2□□□□□ -0.62
CA9-204ENST00000617161 F8W1H4 67 aa11.19□□□□□ -0.62
CA9-204ENST00000617161 UBL5Q9BZL1 73 aa11.18□□□□□ -0.62
CA9-204ENST00000617161 Q5W150 140 aa11.17□□□□□ -0.62
CA9-204ENST00000617161 ETDBQ3ZM63 59 aa11.16□□□□□ -0.62
CA9-204ENST00000617161 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
CA9-204ENST00000617161 MT2AP02795 61 aa11.13□□□□□ -0.63
CA9-204ENST00000617161 HCG22E2RYF7 251 aa11.1□□□□□ -0.63
CA9-204ENST00000617161 MT1FP04733 61 aa11.05□□□□□ -0.64
CA9-204ENST00000617161 IGKV2D-30A0A075B6S6 120 aa11.04□□□□□ -0.64
CA9-204ENST00000617161 IGKV2-30P06310 120 aa11.04□□□□□ -0.64
CA9-204ENST00000617161 C7orf65Q6ZTY9 151 aa11.01□□□□□ -0.65
CA9-204ENST00000617161 CXCL6P80162 114 aa11□□□□□ -0.65
CA9-204ENST00000617161 A0A1B0GV90 55 aa10.99□□□□□ -0.65
CA9-204ENST00000617161 USH2AO75445 5202 aa10.95□□□□□ -0.66
CA9-204ENST00000617161 H1FX-AS1Q4G0G2 97 aa10.93□□□□□ -0.66
CA9-204ENST00000617161 KRTAP9-3Q9BYQ3 159 aa10.93□□□□□ -0.66
CA9-204ENST00000617161 KRTAP10-10P60014 251 aa10.92□□□□□ -0.66
CA9-204ENST00000617161 LCE2BO14633 110 aa10.87□□□□□ -0.67
CA9-204ENST00000617161 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
CA9-204ENST00000617161 SSPOA2VEC9 5147 aa10.85□□□□□ -0.67
CA9-204ENST00000617161 ACYP1P07311 99 aa10.85□□□□□ -0.67
CA9-204ENST00000617161 FAM240AA0A1B0GVK7 77 aa10.83□□□□□ -0.68
CA9-204ENST00000617161 TP53AIP1Q9HCN2 124 aa10.82□□□□□ -0.68
CA9-204ENST00000617161 KRTAP3-1Q9BYR8 98 aa10.78□□□□□ -0.68
CA9-204ENST00000617161 ATP5EP2Q5VTU8 51 aa10.72□□□□□ -0.69
CA9-204ENST00000617161 HIST1H4AP62805 103 aaKnown RBP10.66□□□□□ -0.7
CA9-204ENST00000617161 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
CA9-204ENST00000617161 CYP4F30PQ9H0H9 118 aa10.64□□□□□ -0.71
CA9-204ENST00000617161 TRAV22A0A0B4J277 110 aa10.63□□□□□ -0.71
CA9-204ENST00000617161 A0A087WVE0 104 aa10.61□□□□□ -0.71
CA9-204ENST00000617161 LINC00643Q86TS7 51 aa10.61□□□□□ -0.71
CA9-204ENST00000617161 C5orf47Q569G3 176 aa10.59□□□□□ -0.71
CA9-204ENST00000617161 KRTAP19-1Q8IUB9 90 aa10.59□□□□□ -0.71
CA9-204ENST00000617161 S4R3F8 94 aa10.57□□□□□ -0.72
CA9-204ENST00000617161 LCA10Q71F78 164 aa10.56□□□□□ -0.72
CA9-204ENST00000617161 FCGBPQ9Y6R7 5405 aaPredicted RBP10.55□□□□□ -0.72
CA9-204ENST00000617161 LOC101927531A0A1B0GV80 90 aa10.54□□□□□ -0.72
CA9-204ENST00000617161 UQCRQO14949 82 aa10.52□□□□□ -0.72
CA9-204ENST00000617161 H0Y9P7 68 aa10.48□□□□□ -0.73
CA9-204ENST00000617161 KRTAP3-3Q9BYR6 98 aa10.48□□□□□ -0.73
CA9-204ENST00000617161 CSAG1Q6PB30 78 aa10.46□□□□□ -0.74
CA9-204ENST00000617161 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.45□□□□□ -0.74
CA9-204ENST00000617161 ATOX1O00244 68 aa10.43□□□□□ -0.74
CA9-204ENST00000617161 KRTAP19-6Q3LI70 58 aa10.42□□□□□ -0.74
CA9-204ENST00000617161 OCR1Q9BZK8 76 aa10.4□□□□□ -0.74
CA9-204ENST00000617161 K7ERU9 68 aa10.39□□□□□ -0.75
CA9-204ENST00000617161 J3QR89 54 aa10.37□□□□□ -0.75
CA9-204ENST00000617161 FAM236AA0A1B0GUQ0 79 aa10.36□□□□□ -0.75
CA9-204ENST00000617161 FAM236BA0A1B0GV22 79 aa10.36□□□□□ -0.75
CA9-204ENST00000617161 KLKP1Q107X0 134 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms