RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 MT-ATP8P03928 68 aa4.83□□□□□ -1.64
PSMB3-208ENST00000613870 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
PSMB3-208ENST00000613870 C5orf47Q569G3 176 aa4.83□□□□□ -1.64
PSMB3-208ENST00000613870 J3KT08 172 aa4.81□□□□□ -1.64
PSMB3-208ENST00000613870 HIST1H4AP62805 103 aaKnown RBP4.81□□□□□ -1.64
PSMB3-208ENST00000613870 ATP5EP2Q5VTU8 51 aa4.81□□□□□ -1.64
PSMB3-208ENST00000613870 NDUFB1O75438 58 aa4.8□□□□□ -1.64
PSMB3-208ENST00000613870 IMUPQ9GZP8 106 aa4.8□□□□□ -1.64
PSMB3-208ENST00000613870 RPS29P62273 56 aaKnown RBP4.79□□□□□ -1.64
PSMB3-208ENST00000613870 CXCL6P80162 114 aa4.79□□□□□ -1.64
PSMB3-208ENST00000613870 ASB16-AS1Q495Z4 193 aa4.79□□□□□ -1.64
PSMB3-208ENST00000613870 Q5XG85 94 aa4.79□□□□□ -1.64
PSMB3-208ENST00000613870 LINC00472Q9H8W2 130 aa4.79□□□□□ -1.64
PSMB3-208ENST00000613870 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
PSMB3-208ENST00000613870 Q8N9L7 120 aa4.78□□□□□ -1.64
PSMB3-208ENST00000613870 RETNLBQ9BQ08 111 aa4.78□□□□□ -1.64
PSMB3-208ENST00000613870 SEC61GP60059 68 aa4.77□□□□□ -1.65
PSMB3-208ENST00000613870 IGHV6-1A0A0B4J1U7 121 aa4.76□□□□□ -1.65
PSMB3-208ENST00000613870 A8MWP4 228 aa4.76□□□□□ -1.65
PSMB3-208ENST00000613870 Q96NJ1 140 aa4.76□□□□□ -1.65
PSMB3-208ENST00000613870 K7EQZ3 153 aa4.75□□□□□ -1.65
PSMB3-208ENST00000613870 DSCR10P59022 87 aa4.75□□□□□ -1.65
PSMB3-208ENST00000613870 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
PSMB3-208ENST00000613870 PRR4Q16378 134 aa4.74□□□□□ -1.65
PSMB3-208ENST00000613870 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
PSMB3-208ENST00000613870 MUC2Q02817 5179 aa4.72□□□□□ -1.65
PSMB3-208ENST00000613870 A0A087WVE0 104 aa4.72□□□□□ -1.65
PSMB3-208ENST00000613870 WFDC13Q8IUB5 93 aa4.71□□□□□ -1.66
PSMB3-208ENST00000613870 IGLV7-46A0A075B6I9 117 aa4.7□□□□□ -1.66
PSMB3-208ENST00000613870 C8orf87E5RJ46 101 aa4.7□□□□□ -1.66
PSMB3-208ENST00000613870 CCDC179H3BU77 68 aa4.7□□□□□ -1.66
PSMB3-208ENST00000613870 LINC00313P59037 77 aa4.7□□□□□ -1.66
PSMB3-208ENST00000613870 C8orf17Q9NRJ1 99 aa4.7□□□□□ -1.66
PSMB3-208ENST00000613870 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
PSMB3-208ENST00000613870 HCG22E2RYF7 251 aa4.69□□□□□ -1.66
PSMB3-208ENST00000613870 UQCRQO14949 82 aa4.69□□□□□ -1.66
PSMB3-208ENST00000613870 CASC2Q6XLA1 102 aa4.69□□□□□ -1.66
PSMB3-208ENST00000613870 FP248Q71RG6 208 aaPredicted RBP4.69□□□□□ -1.66
PSMB3-208ENST00000613870 FAM236AA0A1B0GUQ0 79 aa4.68□□□□□ -1.66
PSMB3-208ENST00000613870 FAM236BA0A1B0GV22 79 aa4.68□□□□□ -1.66
PSMB3-208ENST00000613870 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
PSMB3-208ENST00000613870 NDUFS5O43920 106 aa4.68□□□□□ -1.66
PSMB3-208ENST00000613870 SMIM20Q8N5G0 67 aa4.68□□□□□ -1.66
PSMB3-208ENST00000613870 RPS28P62857 69 aaKnown RBP4.67□□□□□ -1.66
PSMB3-208ENST00000613870 MMP24-AS1A0A0U1RRL7 71 aa4.66□□□□□ -1.66
PSMB3-208ENST00000613870 ATOX1O00244 68 aa4.66□□□□□ -1.66
PSMB3-208ENST00000613870 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
PSMB3-208ENST00000613870 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
PSMB3-208ENST00000613870 MUC17Q685J3 4493 aa4.66□□□□□ -1.66
PSMB3-208ENST00000613870 COX7CP15954 63 aa4.64□□□□□ -1.67
PSMB3-208ENST00000613870 TMEM254Q8TBM7 123 aa4.64□□□□□ -1.67
PSMB3-208ENST00000613870 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
PSMB3-208ENST00000613870 TMEM258P61165 79 aa4.62□□□□□ -1.67
PSMB3-208ENST00000613870 KRTAP13-3Q3SY46 172 aa4.6□□□□□ -1.67
PSMB3-208ENST00000613870 V9GYY9 64 aa4.6□□□□□ -1.67
PSMB3-208ENST00000613870 KRTAP16-1A8MUX0 517 aa4.58□□□□□ -1.68
PSMB3-208ENST00000613870 SERP2Q8N6R1 65 aa4.58□□□□□ -1.68
PSMB3-208ENST00000613870 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
PSMB3-208ENST00000613870 TRAV7A0A075B6U4 112 aa4.57□□□□□ -1.68
PSMB3-208ENST00000613870 TPRXLQ17RH7 258 aa4.57□□□□□ -1.68
PSMB3-208ENST00000613870 XP32Q5T750 250 aa4.55□□□□□ -1.68
PSMB3-208ENST00000613870 ATP11AUNQ6ZP68 121 aa4.55□□□□□ -1.68
PSMB3-208ENST00000613870 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
PSMB3-208ENST00000613870 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
PSMB3-208ENST00000613870 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
PSMB3-208ENST00000613870 A8MUU9 505 aa4.54□□□□□ -1.68
PSMB3-208ENST00000613870 H0Y9P7 68 aa4.54□□□□□ -1.68
PSMB3-208ENST00000613870 MP68P56378 58 aa4.54□□□□□ -1.68
PSMB3-208ENST00000613870 Q75L30 129 aa4.54□□□□□ -1.68
PSMB3-208ENST00000613870 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
PSMB3-208ENST00000613870 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
PSMB3-208ENST00000613870 RPL37P61927 97 aaKnown RBP4.52□□□□□ -1.69
PSMB3-208ENST00000613870 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
PSMB3-208ENST00000613870 Q5W150 140 aa4.5□□□□□ -1.69
PSMB3-208ENST00000613870 LINC00208Q96KT6 92 aa4.5□□□□□ -1.69
PSMB3-208ENST00000613870 C20orf197Q8N268 126 aa4.49□□□□□ -1.69
PSMB3-208ENST00000613870 C1orf64Q8NEQ6 169 aa4.49□□□□□ -1.69
PSMB3-208ENST00000613870 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
PSMB3-208ENST00000613870 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
PSMB3-208ENST00000613870 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
PSMB3-208ENST00000613870 ATP5EP56381 51 aaPredicted RBP4.48□□□□□ -1.69
PSMB3-208ENST00000613870 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
PSMB3-208ENST00000613870 PCOTHQ58A44 107 aa4.48□□□□□ -1.69
PSMB3-208ENST00000613870 NDUFC1O43677 76 aa4.47□□□□□ -1.69
PSMB3-208ENST00000613870 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
PSMB3-208ENST00000613870 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
PSMB3-208ENST00000613870 A0A0U1RQV1 116 aa4.46□□□□□ -1.7
PSMB3-208ENST00000613870 H3BPC8 53 aa4.46□□□□□ -1.7
PSMB3-208ENST00000613870 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
PSMB3-208ENST00000613870 LOC101927531A0A1B0GV80 90 aa4.45□□□□□ -1.7
PSMB3-208ENST00000613870 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
PSMB3-208ENST00000613870 KLKP1Q107X0 134 aa4.44□□□□□ -1.7
PSMB3-208ENST00000613870 C7orf65Q6ZTY9 151 aa4.44□□□□□ -1.7
PSMB3-208ENST00000613870 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
PSMB3-208ENST00000613870 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
PSMB3-208ENST00000613870 SPINK7P58062 85 aa4.42□□□□□ -1.7
PSMB3-208ENST00000613870 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
PSMB3-208ENST00000613870 SMIM26A0A096LP01 95 aa4.41□□□□□ -1.7
PSMB3-208ENST00000613870 CYP4F30PQ9H0H9 118 aa4.41□□□□□ -1.7
PSMB3-208ENST00000613870 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms