RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 Q5XG85 94 aa4.21□□□□□ -1.74
ABCA13-208ENST00000611776 BSNQ9UPA5 3926 aa4.2□□□□□ -1.74
ABCA13-208ENST00000611776 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
ABCA13-208ENST00000611776 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
ABCA13-208ENST00000611776 DCHS2Q6V1P9 2916 aa4.19□□□□□ -1.74
ABCA13-208ENST00000611776 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
ABCA13-208ENST00000611776 ZNF292O60281 2723 aa4.19□□□□□ -1.74
ABCA13-208ENST00000611776 APCP25054 2843 aa4.19□□□□□ -1.74
ABCA13-208ENST00000611776 Q6ZR54 194 aa4.18□□□□□ -1.74
ABCA13-208ENST00000611776 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
ABCA13-208ENST00000611776 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
ABCA13-208ENST00000611776 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
ABCA13-208ENST00000611776 FBN2P35556 2912 aa4.16□□□□□ -1.74
ABCA13-208ENST00000611776 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
ABCA13-208ENST00000611776 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.74
ABCA13-208ENST00000611776 FLNCQ14315 2725 aa4.15□□□□□ -1.74
ABCA13-208ENST00000611776 CELSR2Q9HCU4 2923 aa4.13□□□□□ -1.75
ABCA13-208ENST00000611776 HRNRQ86YZ3 2850 aaPredicted RBP4.12□□□□□ -1.75
ABCA13-208ENST00000611776 KMT2BQ9UMN6 2715 aaPredicted RBP4.11□□□□□ -1.75
ABCA13-208ENST00000611776 Q5W150 140 aa4.11□□□□□ -1.75
ABCA13-208ENST00000611776 SPANXA2-OT1Q8N9U9 137 aa4.1□□□□□ -1.75
ABCA13-208ENST00000611776 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
ABCA13-208ENST00000611776 TENM4Q6N022 2769 aa4.1□□□□□ -1.75
ABCA13-208ENST00000611776 ZANQ9Y493 2812 aa4.09□□□□□ -1.75
ABCA13-208ENST00000611776 HIVEP1P15822 2718 aa4.09□□□□□ -1.75
ABCA13-208ENST00000611776 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
ABCA13-208ENST00000611776 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
ABCA13-208ENST00000611776 SPRR1BP22528 89 aa4.05□□□□□ -1.76
ABCA13-208ENST00000611776 PANO1I0J062 215 aa4.05□□□□□ -1.76
ABCA13-208ENST00000611776 Q5VV11 94 aa4.04□□□□□ -1.76
ABCA13-208ENST00000611776 A0A087X002 238 aa4.04□□□□□ -1.76
ABCA13-208ENST00000611776 UBR5O95071 2799 aaPredicted RBP4.03□□□□□ -1.76
ABCA13-208ENST00000611776 NF1P21359 2839 aa4.03□□□□□ -1.76
ABCA13-208ENST00000611776 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
ABCA13-208ENST00000611776 ITPR2Q14571 2701 aa4.02□□□□□ -1.77
ABCA13-208ENST00000611776 KRTAP29-1A8MX34 341 aaPredicted RBP4.01□□□□□ -1.77
ABCA13-208ENST00000611776 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
ABCA13-208ENST00000611776 Q75L30 129 aa4.01□□□□□ -1.77
ABCA13-208ENST00000611776 A8MU10 97 aa3.99□□□□□ -1.77
ABCA13-208ENST00000611776 NSD1Q96L73 2696 aaPredicted RBP3.99□□□□□ -1.77
ABCA13-208ENST00000611776 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
ABCA13-208ENST00000611776 TNP1P09430 55 aa3.98□□□□□ -1.77
ABCA13-208ENST00000611776 A8MUU9 505 aa3.97□□□□□ -1.77
ABCA13-208ENST00000611776 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
ABCA13-208ENST00000611776 KRTAP26-1Q6PEX3 210 aa3.94□□□□□ -1.78
ABCA13-208ENST00000611776 LINC00472Q9H8W2 130 aa3.94□□□□□ -1.78
ABCA13-208ENST00000611776 SPRR1AP35321 89 aa3.93□□□□□ -1.78
ABCA13-208ENST00000611776 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
ABCA13-208ENST00000611776 MXRA5Q9NR99 2828 aa3.92□□□□□ -1.78
ABCA13-208ENST00000611776 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
ABCA13-208ENST00000611776 NIPBLQ6KC79 2804 aaeCLIP3.92□□□□□ -1.78
ABCA13-208ENST00000611776 Q6ZRN7 208 aaPredicted RBP3.92□□□□□ -1.78
ABCA13-208ENST00000611776 KRTAP11-1Q8IUC1 163 aa3.91□□□□□ -1.78
ABCA13-208ENST00000611776 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.78
ABCA13-208ENST00000611776 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
ABCA13-208ENST00000611776 KRTAP4-16G5E9R7 235 aaPredicted RBP3.86□□□□□ -1.79
ABCA13-208ENST00000611776 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
ABCA13-208ENST00000611776 AKAP9Q99996 3911 aa3.86□□□□□ -1.79
ABCA13-208ENST00000611776 TRRAPQ9Y4A5 3859 aa3.85□□□□□ -1.79
ABCA13-208ENST00000611776 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
ABCA13-208ENST00000611776 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.79
ABCA13-208ENST00000611776 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.8
ABCA13-208ENST00000611776 TENM2Q9NT68 2774 aa3.83□□□□□ -1.8
ABCA13-208ENST00000611776 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
ABCA13-208ENST00000611776 A6NN06 94 aa3.81□□□□□ -1.8
ABCA13-208ENST00000611776 XP32Q5T750 250 aa3.8□□□□□ -1.8
ABCA13-208ENST00000611776 KRTAP13-2Q52LG2 175 aa3.79□□□□□ -1.8
ABCA13-208ENST00000611776 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
ABCA13-208ENST00000611776 PDZD2O15018 2839 aa3.76□□□□□ -1.81
ABCA13-208ENST00000611776 RPS29P62273 56 aaKnown RBP3.74□□□□□ -1.81
ABCA13-208ENST00000611776 PKD1L1Q8TDX9 2849 aa3.73□□□□□ -1.81
ABCA13-208ENST00000611776 FBN1P35555 2871 aaKnown RBP3.72□□□□□ -1.81
ABCA13-208ENST00000611776 KRTAP4-5Q9BYR2 181 aa3.7□□□□□ -1.82
ABCA13-208ENST00000611776 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
ABCA13-208ENST00000611776 TENM1Q9UKZ4 2725 aa3.69□□□□□ -1.82
ABCA13-208ENST00000611776 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
ABCA13-208ENST00000611776 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
ABCA13-208ENST00000611776 VWFP04275 2813 aa3.67□□□□□ -1.82
ABCA13-208ENST00000611776 TGP01266 2768 aa3.66□□□□□ -1.82
ABCA13-208ENST00000611776 OTOGQ6ZRI0 2925 aa3.66□□□□□ -1.82
ABCA13-208ENST00000611776 TENM3Q9P273 2699 aa3.66□□□□□ -1.82
ABCA13-208ENST00000611776 ANK3Q12955 4377 aaKnown RBP3.66□□□□□ -1.82
ABCA13-208ENST00000611776 KRTAP13-1Q8IUC0 172 aa3.62□□□□□ -1.83
ABCA13-208ENST00000611776 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
ABCA13-208ENST00000611776 FBN3Q75N90 2809 aa3.61□□□□□ -1.83
ABCA13-208ENST00000611776 SRRM2Q9UQ35 2752 aaKnown RBP3.59□□□□□ -1.83
ABCA13-208ENST00000611776 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
ABCA13-208ENST00000611776 H0YAA0 97 aa3.57□□□□□ -1.84
ABCA13-208ENST00000611776 KRTAP1-4P0C5Y4 121 aa3.55□□□□□ -1.84
ABCA13-208ENST00000611776 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
ABCA13-208ENST00000611776 FRAS1Q86XX4 4008 aa3.49□□□□□ -1.85
ABCA13-208ENST00000611776 MEGF8Q7Z7M0 2845 aa3.48□□□□□ -1.85
ABCA13-208ENST00000611776 LYSTQ99698 3801 aa3.48□□□□□ -1.85
ABCA13-208ENST00000611776 KRTAP15-1Q3LI76 137 aa3.48□□□□□ -1.85
ABCA13-208ENST00000611776 HUWE1Q7Z6Z7 4374 aaKnown RBP3.46□□□□□ -1.86
ABCA13-208ENST00000611776 DNAH10Q8IVF4 4471 aa3.44□□□□□ -1.86
ABCA13-208ENST00000611776 ANK2Q01484 3957 aa3.42□□□□□ -1.86
ABCA13-208ENST00000611776 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
ABCA13-208ENST00000611776 KRTAP17-1Q9BYP8 105 aa3.38□□□□□ -1.87
ABCA13-208ENST00000611776 CMYA5Q8N3K9 4069 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms