RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
NEK3-205ENST00000610828 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
NEK3-205ENST00000610828 CD164Q04900 197 aa7.99□□□□□ -1.13
NEK3-205ENST00000610828 LINC00208Q96KT6 92 aa7.99□□□□□ -1.13
NEK3-205ENST00000610828 H0Y9P7 68 aa7.98□□□□□ -1.13
NEK3-205ENST00000610828 SMIM26A0A096LP01 95 aa7.97□□□□□ -1.13
NEK3-205ENST00000610828 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
NEK3-205ENST00000610828 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.13
NEK3-205ENST00000610828 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.13
NEK3-205ENST00000610828 FAM229BQ4G0N7 80 aa7.95□□□□□ -1.14
NEK3-205ENST00000610828 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
NEK3-205ENST00000610828 TRAV22A0A0B4J277 110 aa7.93□□□□□ -1.14
NEK3-205ENST00000610828 NDUFS5O43920 106 aa7.93□□□□□ -1.14
NEK3-205ENST00000610828 KRTAP1-4P0C5Y4 121 aa7.93□□□□□ -1.14
NEK3-205ENST00000610828 H3BPC8 53 aa7.92□□□□□ -1.14
NEK3-205ENST00000610828 PRR4Q16378 134 aa7.92□□□□□ -1.14
NEK3-205ENST00000610828 C1orf64Q8NEQ6 169 aa7.92□□□□□ -1.14
NEK3-205ENST00000610828 MRPL34Q9BQ48 92 aaKnown RBP7.91□□□□□ -1.14
NEK3-205ENST00000610828 TP53AIP1Q9HCN2 124 aa7.91□□□□□ -1.14
NEK3-205ENST00000610828 PMAIP1Q13794 54 aa7.9□□□□□ -1.15
NEK3-205ENST00000610828 PLA2G1BP04054 148 aaKnown RBP7.89□□□□□ -1.15
NEK3-205ENST00000610828 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
NEK3-205ENST00000610828 MPLKIPQ8TAP9 179 aa7.88□□□□□ -1.15
NEK3-205ENST00000610828 SMR3BP02814 79 aaPredicted RBP7.85□□□□□ -1.15
NEK3-205ENST00000610828 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
NEK3-205ENST00000610828 A0A1B0GVY2 172 aa7.84□□□□□ -1.15
NEK3-205ENST00000610828 TYMSOSQ8TAI1 123 aa7.84□□□□□ -1.15
NEK3-205ENST00000610828 RYR2Q92736 4967 aa7.83□□□□□ -1.16
NEK3-205ENST00000610828 LIMD2Q9BT23 127 aa7.83□□□□□ -1.16
NEK3-205ENST00000610828 CYP4F30PQ9H0H9 118 aa7.83□□□□□ -1.16
NEK3-205ENST00000610828 KMT2CQ8NEZ4 4911 aaKnown RBP7.82□□□□□ -1.16
NEK3-205ENST00000610828 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
NEK3-205ENST00000610828 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
NEK3-205ENST00000610828 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
NEK3-205ENST00000610828 LINC00313P59037 77 aa7.8□□□□□ -1.16
NEK3-205ENST00000610828 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
NEK3-205ENST00000610828 FAT1Q14517 4588 aa7.79□□□□□ -1.16
NEK3-205ENST00000610828 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
NEK3-205ENST00000610828 H3BS24 57 aa7.77□□□□□ -1.17
NEK3-205ENST00000610828 SPINK1P00995 79 aa7.77□□□□□ -1.17
NEK3-205ENST00000610828 Q5W150 140 aa7.76□□□□□ -1.17
NEK3-205ENST00000610828 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
NEK3-205ENST00000610828 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
NEK3-205ENST00000610828 IGLV7-46A0A075B6I9 117 aa7.73□□□□□ -1.17
NEK3-205ENST00000610828 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
NEK3-205ENST00000610828 KRTAP13-3Q3SY46 172 aa7.72□□□□□ -1.17
NEK3-205ENST00000610828 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.18
NEK3-205ENST00000610828 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.18
NEK3-205ENST00000610828 KRTAP10-4P60372 401 aaPredicted RBP7.7□□□□□ -1.18
NEK3-205ENST00000610828 Q1T7F1 81 aa7.7□□□□□ -1.18
NEK3-205ENST00000610828 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
NEK3-205ENST00000610828 RETNLBQ9BQ08 111 aa7.69□□□□□ -1.18
NEK3-205ENST00000610828 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
NEK3-205ENST00000610828 SPAG11AQ6PDA7 123 aa7.67□□□□□ -1.18
NEK3-205ENST00000610828 PSPHP1O15172 72 aa7.66□□□□□ -1.18
NEK3-205ENST00000610828 RPS29P62273 56 aaKnown RBP7.66□□□□□ -1.18
NEK3-205ENST00000610828 PKHD1L1Q86WI1 4243 aa7.65□□□□□ -1.19
NEK3-205ENST00000610828 COA5Q86WW8 74 aa7.64□□□□□ -1.19
NEK3-205ENST00000610828 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
NEK3-205ENST00000610828 A8MUN3 132 aa7.59□□□□□ -1.19
NEK3-205ENST00000610828 RYR3Q15413 4870 aa7.59□□□□□ -1.19
NEK3-205ENST00000610828 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
NEK3-205ENST00000610828 HRES1P13985 223 aa7.56□□□□□ -1.2
NEK3-205ENST00000610828 HSPG2P98160 4391 aa7.55□□□□□ -1.2
NEK3-205ENST00000610828 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
NEK3-205ENST00000610828 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
NEK3-205ENST00000610828 Q5VV11 94 aa7.53□□□□□ -1.2
NEK3-205ENST00000610828 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
NEK3-205ENST00000610828 Q5VSD8 79 aa7.51□□□□□ -1.21
NEK3-205ENST00000610828 LRP1Q07954 4544 aaKnown RBP7.5□□□□□ -1.21
NEK3-205ENST00000610828 ACYP2P14621 99 aa7.49□□□□□ -1.21
NEK3-205ENST00000610828 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
NEK3-205ENST00000610828 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
NEK3-205ENST00000610828 TNXBP22105 4242 aa7.48□□□□□ -1.21
NEK3-205ENST00000610828 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
NEK3-205ENST00000610828 Q8N1X5 172 aa7.45□□□□□ -1.22
NEK3-205ENST00000610828 RYR1P21817 5038 aa7.45□□□□□ -1.22
NEK3-205ENST00000610828 FLG2Q5D862 2391 aaPredicted RBP7.44□□□□□ -1.22
NEK3-205ENST00000610828 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
NEK3-205ENST00000610828 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
NEK3-205ENST00000610828 A8MU10 97 aa7.42□□□□□ -1.22
NEK3-205ENST00000610828 A8MUU9 505 aa7.42□□□□□ -1.22
NEK3-205ENST00000610828 LINC01558Q9Y6Z2 57 aa7.41□□□□□ -1.22
NEK3-205ENST00000610828 Q75L30 129 aa7.41□□□□□ -1.22
NEK3-205ENST00000610828 KRTAP10-8P60410 259 aa7.4□□□□□ -1.22
NEK3-205ENST00000610828 FAT3Q8TDW7 4589 aa7.4□□□□□ -1.22
NEK3-205ENST00000610828 A6NED7 52 aa7.38□□□□□ -1.23
NEK3-205ENST00000610828 KIAA1109Q2LD37 5005 aa7.38□□□□□ -1.23
NEK3-205ENST00000610828 KRTAP17-1Q9BYP8 105 aa7.37□□□□□ -1.23
NEK3-205ENST00000610828 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
NEK3-205ENST00000610828 EPPK1P58107 5090 aaKnown RBP7.32□□□□□ -1.24
NEK3-205ENST00000610828 LCA10Q71F78 164 aa7.32□□□□□ -1.24
NEK3-205ENST00000610828 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
NEK3-205ENST00000610828 SPINK7P58062 85 aa7.28□□□□□ -1.24
NEK3-205ENST00000610828 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.24
NEK3-205ENST00000610828 CDC42SE1Q9NRR8 79 aa7.26□□□□□ -1.25
NEK3-205ENST00000610828 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
NEK3-205ENST00000610828 A0A1B0GU69 56 aa7.22□□□□□ -1.25
NEK3-205ENST00000610828 ATP11AUNQ6ZP68 121 aa7.22□□□□□ -1.25
NEK3-205ENST00000610828 A6NN06 94 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms