RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 A0A1W2PPM0 123 aa8.86□□□□□ -0.99
PRKN-208ENST00000610470 VPS25Q9BRG1 176 aa8.86□□□□□ -0.99
PRKN-208ENST00000610470 LINC00472Q9H8W2 130 aa8.86□□□□□ -0.99
PRKN-208ENST00000610470 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
PRKN-208ENST00000610470 C9JAW5 83 aa8.85□□□□□ -0.99
PRKN-208ENST00000610470 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
PRKN-208ENST00000610470 IGHV6-1A0A0B4J1U7 121 aa8.81□□□□□ -1
PRKN-208ENST00000610470 JMJD7-PLA2G4BH0Y9G9 81 aa8.81□□□□□ -1
PRKN-208ENST00000610470 NOTCH2NLQ7Z3S9 236 aa8.81□□□□□ -1
PRKN-208ENST00000610470 PCP4L1A6NKN8 68 aa8.79□□□□□ -1
PRKN-208ENST00000610470 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
PRKN-208ENST00000610470 MTURNQ8N3F0 131 aa8.78□□□□□ -1
PRKN-208ENST00000610470 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
PRKN-208ENST00000610470 C8orf87E5RJ46 101 aa8.77□□□□□ -1.01
PRKN-208ENST00000610470 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
PRKN-208ENST00000610470 LCE2BO14633 110 aa8.76□□□□□ -1.01
PRKN-208ENST00000610470 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
PRKN-208ENST00000610470 Q6ZQT0 140 aa8.76□□□□□ -1.01
PRKN-208ENST00000610470 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
PRKN-208ENST00000610470 SPCS1Q9Y6A9 102 aa8.76□□□□□ -1.01
PRKN-208ENST00000610470 LOC110117498A0A087WWA1 95 aa8.75□□□□□ -1.01
PRKN-208ENST00000610470 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
PRKN-208ENST00000610470 RBM12B-AS1Q9P1G2 102 aa8.75□□□□□ -1.01
PRKN-208ENST00000610470 H3BT86 120 aa8.74□□□□□ -1.01
PRKN-208ENST00000610470 J3KT08 172 aa8.73□□□□□ -1.01
PRKN-208ENST00000610470 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
PRKN-208ENST00000610470 PDE6GP18545 87 aa8.72□□□□□ -1.01
PRKN-208ENST00000610470 HRES1P13985 223 aa8.71□□□□□ -1.02
PRKN-208ENST00000610470 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
PRKN-208ENST00000610470 A0A1B0GW54 56 aa8.67□□□□□ -1.02
PRKN-208ENST00000610470 NDUFB1O75438 58 aa8.66□□□□□ -1.02
PRKN-208ENST00000610470 K7EP34 96 aa8.65□□□□□ -1.02
PRKN-208ENST00000610470 ZCCHC13Q8WW36 166 aaKnown RBP8.65□□□□□ -1.02
PRKN-208ENST00000610470 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
PRKN-208ENST00000610470 MT2AP02795 61 aa8.6□□□□□ -1.03
PRKN-208ENST00000610470 Q8N9P0 234 aaPredicted RBP8.6□□□□□ -1.03
PRKN-208ENST00000610470 USH2AO75445 5202 aa8.6□□□□□ -1.03
PRKN-208ENST00000610470 A8MWP4 228 aa8.59□□□□□ -1.03
PRKN-208ENST00000610470 SPINK7P58062 85 aa8.59□□□□□ -1.03
PRKN-208ENST00000610470 NREPQ16612 68 aa8.59□□□□□ -1.03
PRKN-208ENST00000610470 GTF2H5Q6ZYL4 71 aa8.57□□□□□ -1.04
PRKN-208ENST00000610470 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
PRKN-208ENST00000610470 SSPOA2VEC9 5147 aa8.55□□□□□ -1.04
PRKN-208ENST00000610470 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
PRKN-208ENST00000610470 MT1FP04733 61 aa8.53□□□□□ -1.04
PRKN-208ENST00000610470 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
PRKN-208ENST00000610470 Q6ZVQ6 151 aa8.51□□□□□ -1.05
PRKN-208ENST00000610470 F8W1H4 67 aa8.49□□□□□ -1.05
PRKN-208ENST00000610470 PRR15Q8IV56 129 aa8.49□□□□□ -1.05
PRKN-208ENST00000610470 WFDC13Q8IUB5 93 aa8.47□□□□□ -1.05
PRKN-208ENST00000610470 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
PRKN-208ENST00000610470 BPY2O14599 106 aa8.45□□□□□ -1.06
PRKN-208ENST00000610470 ETDBQ3ZM63 59 aa8.44□□□□□ -1.06
PRKN-208ENST00000610470 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
PRKN-208ENST00000610470 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
PRKN-208ENST00000610470 K7EQZ3 153 aa8.43□□□□□ -1.06
PRKN-208ENST00000610470 LINC00846Q9NV44 126 aa8.43□□□□□ -1.06
PRKN-208ENST00000610470 MMP24-AS1A0A0U1RRL7 71 aa8.42□□□□□ -1.06
PRKN-208ENST00000610470 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.42□□□□□ -1.06
PRKN-208ENST00000610470 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
PRKN-208ENST00000610470 Q8N9L7 120 aa8.38□□□□□ -1.07
PRKN-208ENST00000610470 UBL5Q9BZL1 73 aa8.38□□□□□ -1.07
PRKN-208ENST00000610470 NDUFS5O43920 106 aa8.37□□□□□ -1.07
PRKN-208ENST00000610470 FCGBPQ9Y6R7 5405 aaPredicted RBP8.35□□□□□ -1.07
PRKN-208ENST00000610470 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
PRKN-208ENST00000610470 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
PRKN-208ENST00000610470 A0A1B0GV90 55 aa8.31□□□□□ -1.08
PRKN-208ENST00000610470 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
PRKN-208ENST00000610470 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
PRKN-208ENST00000610470 IGKV2D-30A0A075B6S6 120 aa8.27□□□□□ -1.09
PRKN-208ENST00000610470 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
PRKN-208ENST00000610470 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
PRKN-208ENST00000610470 Q5W150 140 aa8.24□□□□□ -1.09
PRKN-208ENST00000610470 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
PRKN-208ENST00000610470 CXCL6P80162 114 aa8.22□□□□□ -1.09
PRKN-208ENST00000610470 ACYP1P07311 99 aa8.21□□□□□ -1.1
PRKN-208ENST00000610470 KRTAP19-6Q3LI70 58 aa8.18□□□□□ -1.1
PRKN-208ENST00000610470 FAM240AA0A1B0GVK7 77 aa8.17□□□□□ -1.1
PRKN-208ENST00000610470 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
PRKN-208ENST00000610470 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
PRKN-208ENST00000610470 SYNE2Q8WXH0 6885 aaKnown RBP8.07□□□□□ -1.12
PRKN-208ENST00000610470 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
PRKN-208ENST00000610470 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
PRKN-208ENST00000610470 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
PRKN-208ENST00000610470 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
PRKN-208ENST00000610470 C5orf47Q569G3 176 aa8.01□□□□□ -1.13
PRKN-208ENST00000610470 S4R3F8 94 aa7.99□□□□□ -1.13
PRKN-208ENST00000610470 J3QR89 54 aa7.98□□□□□ -1.13
PRKN-208ENST00000610470 C1orf64Q8NEQ6 169 aa7.98□□□□□ -1.13
PRKN-208ENST00000610470 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
PRKN-208ENST00000610470 FAM236AA0A1B0GUQ0 79 aa7.97□□□□□ -1.13
PRKN-208ENST00000610470 FAM236BA0A1B0GV22 79 aa7.97□□□□□ -1.13
PRKN-208ENST00000610470 A0A087WVE0 104 aa7.96□□□□□ -1.14
PRKN-208ENST00000610470 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
PRKN-208ENST00000610470 LCA10Q71F78 164 aa7.91□□□□□ -1.14
PRKN-208ENST00000610470 TRAV22A0A0B4J277 110 aa7.89□□□□□ -1.15
PRKN-208ENST00000610470 UQCRQO14949 82 aa7.87□□□□□ -1.15
PRKN-208ENST00000610470 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
PRKN-208ENST00000610470 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
PRKN-208ENST00000610470 LOC101927531A0A1B0GV80 90 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms