RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CASC10Q5T4H9 136 aa2.32□□□□□ -2.04
HMGB1P50-201ENST00000605814 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
HMGB1P50-201ENST00000605814 LINC00304Q8N9R0 145 aa2.32□□□□□ -2.04
HMGB1P50-201ENST00000605814 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
HMGB1P50-201ENST00000605814 LAMA5O15230 3695 aa2.32□□□□□ -2.04
HMGB1P50-201ENST00000605814 UTP20O75691 2785 aaKnown RBP2.32□□□□□ -2.04
HMGB1P50-201ENST00000605814 PANO1I0J062 215 aa2.31□□□□□ -2.04
HMGB1P50-201ENST00000605814 AKAP9Q99996 3911 aa2.31□□□□□ -2.04
HMGB1P50-201ENST00000605814 LRRK2Q5S007 2527 aa2.31□□□□□ -2.04
HMGB1P50-201ENST00000605814 OTOGQ6ZRI0 2925 aa2.31□□□□□ -2.04
HMGB1P50-201ENST00000605814 IGF2RP11717 2491 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 NBEAL2Q6ZNJ1 2754 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 P0C880 135 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 Q6ZSA8 131 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 SSBP3-AS1Q7Z2R9 100 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 NAV2Q8IVL1 2488 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 FBN2P35556 2912 aa2.3□□□□□ -2.04
HMGB1P50-201ENST00000605814 ZANQ9Y493 2812 aa2.29□□□□□ -2.04
HMGB1P50-201ENST00000605814 GCN1Q92616 2671 aaKnown RBP2.29□□□□□ -2.04
HMGB1P50-201ENST00000605814 ZFHX2Q9C0A1 2572 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P50-201ENST00000605814 MUC6Q6W4X9 2439 aa2.29□□□□□ -2.04
HMGB1P50-201ENST00000605814 VPS13CQ709C8 3753 aa2.29□□□□□ -2.04
HMGB1P50-201ENST00000605814 CFAP46Q8IYW2 2715 aa2.28□□□□□ -2.04
HMGB1P50-201ENST00000605814 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.04
HMGB1P50-201ENST00000605814 NF1P21359 2839 aa2.28□□□□□ -2.04
HMGB1P50-201ENST00000605814 CHD8Q9HCK8 2581 aa2.28□□□□□ -2.04
HMGB1P50-201ENST00000605814 TTC28Q96AY4 2481 aa2.28□□□□□ -2.04
HMGB1P50-201ENST00000605814 SONP18583 2426 aaKnown RBP2.28□□□□□ -2.04
HMGB1P50-201ENST00000605814 ANK3Q12955 4377 aaKnown RBP2.28□□□□□ -2.05
HMGB1P50-201ENST00000605814 ACACBO00763 2458 aa2.27□□□□□ -2.05
HMGB1P50-201ENST00000605814 PKD1L2Q7Z442 2459 aa2.27□□□□□ -2.05
HMGB1P50-201ENST00000605814 IGLV9-49A0A0B4J1Y8 123 aa2.27□□□□□ -2.05
HMGB1P50-201ENST00000605814 A0A1B0GU33 70 aa2.27□□□□□ -2.05
HMGB1P50-201ENST00000605814 NUPR2A6NF83 97 aa2.27□□□□□ -2.05
HMGB1P50-201ENST00000605814 H0YAA0 97 aa2.27□□□□□ -2.05
HMGB1P50-201ENST00000605814 UNC79Q9P2D8 2635 aa2.26□□□□□ -2.05
HMGB1P50-201ENST00000605814 KRTAP16-1A8MUX0 517 aa2.26□□□□□ -2.05
HMGB1P50-201ENST00000605814 K7ERS5 55 aa2.26□□□□□ -2.05
HMGB1P50-201ENST00000605814 MTORP42345 2549 aa2.26□□□□□ -2.05
HMGB1P50-201ENST00000605814 H1FX-AS1Q4G0G2 97 aa2.25□□□□□ -2.05
HMGB1P50-201ENST00000605814 DNAH1Q9P2D7 4330 aa2.24□□□□□ -2.05
HMGB1P50-201ENST00000605814 PIEZO1Q92508 2521 aa2.24□□□□□ -2.05
HMGB1P50-201ENST00000605814 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
HMGB1P50-201ENST00000605814 COX6B2Q6YFQ2 88 aa2.24□□□□□ -2.05
HMGB1P50-201ENST00000605814 SPACA4Q8TDM5 124 aa2.24□□□□□ -2.05
HMGB1P50-201ENST00000605814 C20orf166-AS1Q96NR2 134 aa2.24□□□□□ -2.05
HMGB1P50-201ENST00000605814 A0A087WTM6 91 aa2.23□□□□□ -2.05
HMGB1P50-201ENST00000605814 SETD2Q9BYW2 2564 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P50-201ENST00000605814 ITPR3Q14573 2671 aa2.22□□□□□ -2.05
HMGB1P50-201ENST00000605814 NIPBLQ6KC79 2804 aaeCLIP2.22□□□□□ -2.05
HMGB1P50-201ENST00000605814 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
HMGB1P50-201ENST00000605814 ABCA12Q86UK0 2595 aa2.21□□□□□ -2.06
HMGB1P50-201ENST00000605814 HIVEP1P15822 2718 aa2.21□□□□□ -2.06
HMGB1P50-201ENST00000605814 SEC61BP60468 96 aaKnown RBP2.21□□□□□ -2.06
HMGB1P50-201ENST00000605814 CSMD2Q7Z408 3487 aa2.21□□□□□ -2.06
HMGB1P50-201ENST00000605814 POLQO75417 2590 aa2.21□□□□□ -2.06
HMGB1P50-201ENST00000605814 UBR5O95071 2799 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P50-201ENST00000605814 MUC3AQ02505 3323 aa2.2□□□□□ -2.06
HMGB1P50-201ENST00000605814 SRRM2Q9UQ35 2752 aaKnown RBP2.2□□□□□ -2.06
HMGB1P50-201ENST00000605814 SPINK6Q6UWN8 80 aa2.2□□□□□ -2.06
HMGB1P50-201ENST00000605814 PSORS1C2Q9UIG4 136 aa2.2□□□□□ -2.06
HMGB1P50-201ENST00000605814 CCDC168Q8NDH2 2452 aa2.2□□□□□ -2.06
HMGB1P50-201ENST00000605814 NOTCH2Q04721 2471 aa2.19□□□□□ -2.06
HMGB1P50-201ENST00000605814 Q6ZRN7 208 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P50-201ENST00000605814 CENPEQ02224 2701 aa2.19□□□□□ -2.06
HMGB1P50-201ENST00000605814 FLNCQ14315 2725 aa2.19□□□□□ -2.06
HMGB1P50-201ENST00000605814 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 RPL37P61927 97 aaKnown RBP2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 TPRXLQ17RH7 258 aa2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 APLNQ9ULZ1 77 aa2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 FAM208BQ5VWN6 2430 aa2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 PKD1L1Q8TDX9 2849 aa2.18□□□□□ -2.06
HMGB1P50-201ENST00000605814 FLG2Q5D862 2391 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P50-201ENST00000605814 FLNAP21333 2647 aaKnown RBP2.17□□□□□ -2.06
HMGB1P50-201ENST00000605814 HELZ2Q9BYK8 2649 aaKnown RBP2.17□□□□□ -2.06
HMGB1P50-201ENST00000605814 CIRBP-AS1Q8TBR5 109 aa2.17□□□□□ -2.06
HMGB1P50-201ENST00000605814 TENM4Q6N022 2769 aa2.16□□□□□ -2.06
HMGB1P50-201ENST00000605814 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
HMGB1P50-201ENST00000605814 VWFP04275 2813 aa2.16□□□□□ -2.06
HMGB1P50-201ENST00000605814 ACANP16112 2415 aa2.15□□□□□ -2.07
HMGB1P50-201ENST00000605814 NBDYA0A0U1RRE5 68 aa2.15□□□□□ -2.07
HMGB1P50-201ENST00000605814 SPINK1P00995 79 aa2.15□□□□□ -2.07
HMGB1P50-201ENST00000605814 MYO18BQ8IUG5 2567 aa2.14□□□□□ -2.07
HMGB1P50-201ENST00000605814 RPS29P62273 56 aaKnown RBP2.14□□□□□ -2.07
HMGB1P50-201ENST00000605814 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
HMGB1P50-201ENST00000605814 PDZD2O15018 2839 aa2.14□□□□□ -2.07
HMGB1P50-201ENST00000605814 HECTD1Q9ULT8 2610 aa2.14□□□□□ -2.07
HMGB1P50-201ENST00000605814 ZNF462Q96JM2 2506 aa2.14□□□□□ -2.07
HMGB1P50-201ENST00000605814 TENM3Q9P273 2699 aa2.13□□□□□ -2.07
HMGB1P50-201ENST00000605814 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
HMGB1P50-201ENST00000605814 UBE2DNLQ8IWF7 75 aa2.13□□□□□ -2.07
HMGB1P50-201ENST00000605814 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
HMGB1P50-201ENST00000605814 ZNF469Q96JG9 3925 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P50-201ENST00000605814 FBN1P35555 2871 aaKnown RBP2.12□□□□□ -2.07
HMGB1P50-201ENST00000605814 IGSF10Q6WRI0 2623 aa2.12□□□□□ -2.07
HMGB1P50-201ENST00000605814 TEP1Q99973 2627 aaKnown RBP2.12□□□□□ -2.07
HMGB1P50-201ENST00000605814 BAHCC1Q9P281 2608 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms