RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 LOC105371267A0A1B0GV96 52 aa8.95□□□□□ -0.98
HERC3-214ENST00000601319 KRTAP16-1A8MUX0 517 aa8.95□□□□□ -0.98
HERC3-214ENST00000601319 JMJD7-PLA2G4BH0Y9G9 81 aa8.94□□□□□ -0.98
HERC3-214ENST00000601319 KRTAP4-12Q9BQ66 201 aa8.94□□□□□ -0.98
HERC3-214ENST00000601319 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
HERC3-214ENST00000601319 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
HERC3-214ENST00000601319 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
HERC3-214ENST00000601319 LOC110117498A0A087WWA1 95 aa8.92□□□□□ -0.98
HERC3-214ENST00000601319 KRTAP9-9Q9BYP9 154 aa8.92□□□□□ -0.98
HERC3-214ENST00000601319 KRTAP9-4Q9BYQ2 154 aa8.92□□□□□ -0.98
HERC3-214ENST00000601319 A0A1B0GW54 56 aa8.91□□□□□ -0.98
HERC3-214ENST00000601319 Q6ZQT0 140 aa8.9□□□□□ -0.98
HERC3-214ENST00000601319 A0A1B0GVX0 72 aa8.89□□□□□ -0.99
HERC3-214ENST00000601319 J3KT08 172 aa8.89□□□□□ -0.99
HERC3-214ENST00000601319 PDE6GP18545 87 aa8.89□□□□□ -0.99
HERC3-214ENST00000601319 BATFQ16520 125 aa8.89□□□□□ -0.99
HERC3-214ENST00000601319 NOTCH2NLQ7Z3S9 236 aa8.89□□□□□ -0.99
HERC3-214ENST00000601319 FLGP20930 4061 aaPredicted RBP8.88□□□□□ -0.99
HERC3-214ENST00000601319 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
HERC3-214ENST00000601319 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
HERC3-214ENST00000601319 KRTAP4-8A0A0G2JLE6 195 aa8.86□□□□□ -0.99
HERC3-214ENST00000601319 C9orf118A6NHY6 69 aa8.84□□□□□ -0.99
HERC3-214ENST00000601319 C14orf132Q9NPU4 83 aa8.83□□□□□ -1
HERC3-214ENST00000601319 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
HERC3-214ENST00000601319 A0A1W2PPM0 123 aa8.81□□□□□ -1
HERC3-214ENST00000601319 M0R2T5 61 aa8.81□□□□□ -1
HERC3-214ENST00000601319 TAX1BP3O14907 124 aa8.81□□□□□ -1
HERC3-214ENST00000601319 H3BT86 120 aa8.8□□□□□ -1
HERC3-214ENST00000601319 NDUFB1O75438 58 aa8.78□□□□□ -1
HERC3-214ENST00000601319 A8MWP4 228 aa8.77□□□□□ -1.01
HERC3-214ENST00000601319 Q8N9P0 234 aaPredicted RBP8.72□□□□□ -1.01
HERC3-214ENST00000601319 IGKV3D-7A0A0C4DH55 119 aa8.71□□□□□ -1.02
HERC3-214ENST00000601319 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
HERC3-214ENST00000601319 C8orf17Q9NRJ1 99 aa8.71□□□□□ -1.02
HERC3-214ENST00000601319 NREPQ16612 68 aa8.7□□□□□ -1.02
HERC3-214ENST00000601319 MTURNQ8N3F0 131 aa8.7□□□□□ -1.02
HERC3-214ENST00000601319 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
HERC3-214ENST00000601319 HRES1P13985 223 aa8.69□□□□□ -1.02
HERC3-214ENST00000601319 PRR15Q8IV56 129 aa8.68□□□□□ -1.02
HERC3-214ENST00000601319 SPCS1Q9Y6A9 102 aa8.67□□□□□ -1.02
HERC3-214ENST00000601319 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
HERC3-214ENST00000601319 KRTAP19-1Q8IUB9 90 aa8.65□□□□□ -1.02
HERC3-214ENST00000601319 COL5A1-AS1Q5SY13 56 aa8.64□□□□□ -1.03
HERC3-214ENST00000601319 Q6ZVQ6 151 aa8.64□□□□□ -1.03
HERC3-214ENST00000601319 FSIP2Q5CZC0 6907 aa8.62□□□□□ -1.03
HERC3-214ENST00000601319 FAM236DA0A1B0GTK5 79 aa8.62□□□□□ -1.03
HERC3-214ENST00000601319 FAM236CP0DP71 79 aa8.62□□□□□ -1.03
HERC3-214ENST00000601319 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
HERC3-214ENST00000601319 TMEM254Q8TBM7 123 aa8.6□□□□□ -1.03
HERC3-214ENST00000601319 K7EQZ3 153 aa8.59□□□□□ -1.03
HERC3-214ENST00000601319 SPINK7P58062 85 aa8.59□□□□□ -1.03
HERC3-214ENST00000601319 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
HERC3-214ENST00000601319 KRTAP4-7Q9BYR0 210 aa8.58□□□□□ -1.04
HERC3-214ENST00000601319 BPY2O14599 106 aa8.56□□□□□ -1.04
HERC3-214ENST00000601319 PRO0461Q9UI25 63 aa8.56□□□□□ -1.04
HERC3-214ENST00000601319 K7EP34 96 aa8.55□□□□□ -1.04
HERC3-214ENST00000601319 CRCT1Q9UGL9 99 aa8.55□□□□□ -1.04
HERC3-214ENST00000601319 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
HERC3-214ENST00000601319 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
HERC3-214ENST00000601319 WFDC13Q8IUB5 93 aa8.48□□□□□ -1.05
HERC3-214ENST00000601319 LCE1DQ5T752 114 aa8.46□□□□□ -1.06
HERC3-214ENST00000601319 GTF2H5Q6ZYL4 71 aa8.46□□□□□ -1.06
HERC3-214ENST00000601319 NDUFS5O43920 106 aa8.45□□□□□ -1.06
HERC3-214ENST00000601319 Q8N9L7 120 aa8.45□□□□□ -1.06
HERC3-214ENST00000601319 UBL5Q9BZL1 73 aa8.45□□□□□ -1.06
HERC3-214ENST00000601319 LINC00846Q9NV44 126 aa8.45□□□□□ -1.06
HERC3-214ENST00000601319 MT2AP02795 61 aa8.43□□□□□ -1.06
HERC3-214ENST00000601319 CASC2Q6XLA1 102 aa8.43□□□□□ -1.06
HERC3-214ENST00000601319 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
HERC3-214ENST00000601319 F8W1H4 67 aa8.4□□□□□ -1.06
HERC3-214ENST00000601319 Q5W150 140 aa8.37□□□□□ -1.07
HERC3-214ENST00000601319 HCG22E2RYF7 251 aa8.36□□□□□ -1.07
HERC3-214ENST00000601319 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
HERC3-214ENST00000601319 MT1FP04733 61 aa8.35□□□□□ -1.07
HERC3-214ENST00000601319 CXCL6P80162 114 aa8.35□□□□□ -1.07
HERC3-214ENST00000601319 ETDBQ3ZM63 59 aa8.34□□□□□ -1.07
HERC3-214ENST00000601319 IGKV2D-30A0A075B6S6 120 aa8.33□□□□□ -1.08
HERC3-214ENST00000601319 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
HERC3-214ENST00000601319 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
HERC3-214ENST00000601319 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
HERC3-214ENST00000601319 KRTAP4-9Q9BYQ8 210 aa8.27□□□□□ -1.09
HERC3-214ENST00000601319 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
HERC3-214ENST00000601319 USH2AO75445 5202 aa8.23□□□□□ -1.09
HERC3-214ENST00000601319 KRTAP4-2Q9BYR5 136 aa8.22□□□□□ -1.09
HERC3-214ENST00000601319 TP53AIP1Q9HCN2 124 aa8.22□□□□□ -1.09
HERC3-214ENST00000601319 ACYP1P07311 99 aa8.2□□□□□ -1.1
HERC3-214ENST00000601319 FAM240AA0A1B0GVK7 77 aa8.18□□□□□ -1.1
HERC3-214ENST00000601319 C4orf26Q17RF5 130 aa8.18□□□□□ -1.1
HERC3-214ENST00000601319 SSPOA2VEC9 5147 aa8.15□□□□□ -1.11
HERC3-214ENST00000601319 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
HERC3-214ENST00000601319 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
HERC3-214ENST00000601319 C1orf64Q8NEQ6 169 aa8.05□□□□□ -1.12
HERC3-214ENST00000601319 TRAV22A0A0B4J277 110 aa8.04□□□□□ -1.12
HERC3-214ENST00000601319 S4R3F8 94 aa8.02□□□□□ -1.13
HERC3-214ENST00000601319 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
HERC3-214ENST00000601319 LOC101927531A0A1B0GV80 90 aa8□□□□□ -1.13
HERC3-214ENST00000601319 HIST1H4AP62805 103 aaKnown RBP8□□□□□ -1.13
HERC3-214ENST00000601319 FCGBPQ9Y6R7 5405 aaPredicted RBP7.98□□□□□ -1.13
HERC3-214ENST00000601319 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
HERC3-214ENST00000601319 LINC00643Q86TS7 51 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms