RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 Q5XG85 94 aa10.89□□□□□ -0.67
PNKP-207ENST00000596014 UBR4Q5T4S7 5183 aa10.83□□□□□ -0.68
PNKP-207ENST00000596014 CCDC179H3BU77 68 aa10.82□□□□□ -0.68
PNKP-207ENST00000596014 BPY2O14599 106 aa10.82□□□□□ -0.68
PNKP-207ENST00000596014 TPRXLQ17RH7 258 aa10.81□□□□□ -0.68
PNKP-207ENST00000596014 C1orf195Q5TG92 126 aa10.79□□□□□ -0.68
PNKP-207ENST00000596014 IGKV4-1P06312 121 aa10.79□□□□□ -0.68
PNKP-207ENST00000596014 ASB16-AS1Q495Z4 193 aa10.77□□□□□ -0.69
PNKP-207ENST00000596014 A0A087WSZ3 146 aa10.76□□□□□ -0.69
PNKP-207ENST00000596014 COX7CP15954 63 aa10.76□□□□□ -0.69
PNKP-207ENST00000596014 KRTAP13-3Q3SY46 172 aa10.76□□□□□ -0.69
PNKP-207ENST00000596014 Q8N9L7 120 aa10.76□□□□□ -0.69
PNKP-207ENST00000596014 UQCRQO14949 82 aa10.75□□□□□ -0.69
PNKP-207ENST00000596014 SERP2Q8N6R1 65 aa10.73□□□□□ -0.69
PNKP-207ENST00000596014 SS18L2Q9UHA2 77 aa10.73□□□□□ -0.69
PNKP-207ENST00000596014 DSCR10P59022 87 aa10.69□□□□□ -0.7
PNKP-207ENST00000596014 SMIM20Q8N5G0 67 aa10.66□□□□□ -0.7
PNKP-207ENST00000596014 K7EQZ3 153 aa10.65□□□□□ -0.7
PNKP-207ENST00000596014 TRAV7A0A075B6U4 112 aa10.63□□□□□ -0.71
PNKP-207ENST00000596014 Q96NJ1 140 aa10.62□□□□□ -0.71
PNKP-207ENST00000596014 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
PNKP-207ENST00000596014 DEFB116Q30KQ4 102 aa10.6□□□□□ -0.71
PNKP-207ENST00000596014 LINC00472Q9H8W2 130 aa10.59□□□□□ -0.71
PNKP-207ENST00000596014 MUC17Q685J3 4493 aa10.58□□□□□ -0.72
PNKP-207ENST00000596014 XP32Q5T750 250 aa10.57□□□□□ -0.72
PNKP-207ENST00000596014 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
PNKP-207ENST00000596014 HCG22E2RYF7 251 aa10.55□□□□□ -0.72
PNKP-207ENST00000596014 J3KT08 172 aa10.53□□□□□ -0.72
PNKP-207ENST00000596014 A8MWP4 228 aa10.53□□□□□ -0.72
PNKP-207ENST00000596014 OCR1Q9BZK8 76 aa10.53□□□□□ -0.72
PNKP-207ENST00000596014 CYSTM1Q9H1C7 97 aa10.52□□□□□ -0.73
PNKP-207ENST00000596014 C20orf197Q8N268 126 aa10.5□□□□□ -0.73
PNKP-207ENST00000596014 PRR15Q8IV56 129 aa10.49□□□□□ -0.73
PNKP-207ENST00000596014 MUC2Q02817 5179 aa10.47□□□□□ -0.73
PNKP-207ENST00000596014 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
PNKP-207ENST00000596014 SEC61BP60468 96 aaKnown RBP10.46□□□□□ -0.74
PNKP-207ENST00000596014 KLKP1Q107X0 134 aa10.44□□□□□ -0.74
PNKP-207ENST00000596014 NDUFB1O75438 58 aa10.42□□□□□ -0.74
PNKP-207ENST00000596014 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
PNKP-207ENST00000596014 TMEM258P61165 79 aa10.41□□□□□ -0.74
PNKP-207ENST00000596014 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
PNKP-207ENST00000596014 TMEM254Q8TBM7 123 aa10.41□□□□□ -0.74
PNKP-207ENST00000596014 SNURFQ9Y675 71 aa10.4□□□□□ -0.74
PNKP-207ENST00000596014 RPL37P61927 97 aaKnown RBP10.39□□□□□ -0.75
PNKP-207ENST00000596014 LINC00313P59037 77 aa10.38□□□□□ -0.75
PNKP-207ENST00000596014 IGHV6-1A0A0B4J1U7 121 aa10.37□□□□□ -0.75
PNKP-207ENST00000596014 A0A1B0GVX0 72 aa10.37□□□□□ -0.75
PNKP-207ENST00000596014 A0A0U1RQV1 116 aa10.36□□□□□ -0.75
PNKP-207ENST00000596014 RPS28P62857 69 aaKnown RBP10.36□□□□□ -0.75
PNKP-207ENST00000596014 PCOTHQ58A44 107 aa10.36□□□□□ -0.75
PNKP-207ENST00000596014 NOTCH2NLQ7Z3S9 236 aa10.35□□□□□ -0.75
PNKP-207ENST00000596014 H7BZZ5 65 aa10.34□□□□□ -0.75
PNKP-207ENST00000596014 Q75L30 129 aa10.34□□□□□ -0.75
PNKP-207ENST00000596014 C8orf17Q9NRJ1 99 aa10.34□□□□□ -0.75
PNKP-207ENST00000596014 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
PNKP-207ENST00000596014 NDUFC1O43677 76 aa10.31□□□□□ -0.76
PNKP-207ENST00000596014 C20orf166-AS1Q96NR2 134 aa10.31□□□□□ -0.76
PNKP-207ENST00000596014 KRTAP4-1Q9BYQ7 146 aa10.31□□□□□ -0.76
PNKP-207ENST00000596014 KRTAP16-1A8MUX0 517 aa10.3□□□□□ -0.76
PNKP-207ENST00000596014 C8orf87E5RJ46 101 aa10.3□□□□□ -0.76
PNKP-207ENST00000596014 A8MUU9 505 aa10.29□□□□□ -0.76
PNKP-207ENST00000596014 C5orf47Q569G3 176 aa10.28□□□□□ -0.76
PNKP-207ENST00000596014 FAM236DA0A1B0GTK5 79 aa10.28□□□□□ -0.76
PNKP-207ENST00000596014 FAM236CP0DP71 79 aa10.28□□□□□ -0.76
PNKP-207ENST00000596014 ATP11AUNQ6ZP68 121 aa10.25□□□□□ -0.77
PNKP-207ENST00000596014 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
PNKP-207ENST00000596014 MP68P56378 58 aa10.22□□□□□ -0.77
PNKP-207ENST00000596014 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
PNKP-207ENST00000596014 H0Y9P7 68 aa10.21□□□□□ -0.78
PNKP-207ENST00000596014 SVIPQ8NHG7 77 aa10.21□□□□□ -0.78
PNKP-207ENST00000596014 ATP5EP56381 51 aaPredicted RBP10.19□□□□□ -0.78
PNKP-207ENST00000596014 TP53AIP1Q9HCN2 124 aa10.18□□□□□ -0.78
PNKP-207ENST00000596014 H3BPC8 53 aa10.18□□□□□ -0.78
PNKP-207ENST00000596014 TRAV22A0A0B4J277 110 aa10.17□□□□□ -0.78
PNKP-207ENST00000596014 NDUFS5O43920 106 aa10.15□□□□□ -0.79
PNKP-207ENST00000596014 FAT4Q6V0I7 4981 aa10.15□□□□□ -0.79
PNKP-207ENST00000596014 LINC00208Q96KT6 92 aa10.14□□□□□ -0.79
PNKP-207ENST00000596014 Q8N9P0 234 aaPredicted RBP10.12□□□□□ -0.79
PNKP-207ENST00000596014 C1orf64Q8NEQ6 169 aa10.08□□□□□ -0.8
PNKP-207ENST00000596014 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
PNKP-207ENST00000596014 KRTAP19-2Q3LHN2 52 aa10□□□□□ -0.81
PNKP-207ENST00000596014 LCE2CQ5TA81 110 aa9.96□□□□□ -0.81
PNKP-207ENST00000596014 CYP4F30PQ9H0H9 118 aa9.96□□□□□ -0.81
PNKP-207ENST00000596014 Q5W150 140 aa9.96□□□□□ -0.82
PNKP-207ENST00000596014 SPANXA2-OT1Q8N9U9 137 aa9.96□□□□□ -0.82
PNKP-207ENST00000596014 LOC101927531A0A1B0GV80 90 aa9.93□□□□□ -0.82
PNKP-207ENST00000596014 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
PNKP-207ENST00000596014 SMIM26A0A096LP01 95 aa9.88□□□□□ -0.83
PNKP-207ENST00000596014 SPINK7P58062 85 aa9.88□□□□□ -0.83
PNKP-207ENST00000596014 COX6B2Q6YFQ2 88 aa9.88□□□□□ -0.83
PNKP-207ENST00000596014 HRES1P13985 223 aa9.85□□□□□ -0.83
PNKP-207ENST00000596014 FLGP20930 4061 aaPredicted RBP9.82□□□□□ -0.84
PNKP-207ENST00000596014 IGKV2-30P06310 120 aa9.8□□□□□ -0.84
PNKP-207ENST00000596014 MT1HP80294 61 aa9.8□□□□□ -0.84
PNKP-207ENST00000596014 MPLKIPQ8TAP9 179 aa9.8□□□□□ -0.84
PNKP-207ENST00000596014 RBM12B-AS1Q9P1G2 102 aa9.77□□□□□ -0.85
PNKP-207ENST00000596014 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
PNKP-207ENST00000596014 IGKV2D-30A0A075B6S6 120 aa9.73□□□□□ -0.85
PNKP-207ENST00000596014 C7orf65Q6ZTY9 151 aa9.7□□□□□ -0.86
PNKP-207ENST00000596014 COA5Q86WW8 74 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms