RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 DEFB116Q30KQ4 102 aa9.34□□□□□ -0.91
LTBP4-209ENST00000594116 Q6ZVQ6 151 aa9.34□□□□□ -0.91
LTBP4-209ENST00000594116 ACYP1P07311 99 aa9.33□□□□□ -0.92
LTBP4-209ENST00000594116 SIGMAR1Q99720 223 aa9.33□□□□□ -0.92
LTBP4-209ENST00000594116 SEC61BP60468 96 aaKnown RBP9.32□□□□□ -0.92
LTBP4-209ENST00000594116 UBL5Q9BZL1 73 aa9.31□□□□□ -0.92
LTBP4-209ENST00000594116 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
LTBP4-209ENST00000594116 XP32Q5T750 250 aa9.27□□□□□ -0.93
LTBP4-209ENST00000594116 A8MWP4 228 aa9.26□□□□□ -0.93
LTBP4-209ENST00000594116 A0A1B0GVX0 72 aa9.25□□□□□ -0.93
LTBP4-209ENST00000594116 J3QR89 54 aa9.25□□□□□ -0.93
LTBP4-209ENST00000594116 BPY2O14599 106 aa9.25□□□□□ -0.93
LTBP4-209ENST00000594116 DSCR10P59022 87 aa9.25□□□□□ -0.93
LTBP4-209ENST00000594116 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
LTBP4-209ENST00000594116 IGKV3D-7A0A0C4DH55 119 aa9.23□□□□□ -0.93
LTBP4-209ENST00000594116 NDUFB1O75438 58 aa9.22□□□□□ -0.93
LTBP4-209ENST00000594116 IGHV6-1A0A0B4J1U7 121 aa9.2□□□□□ -0.94
LTBP4-209ENST00000594116 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
LTBP4-209ENST00000594116 PRR15Q8IV56 129 aa9.2□□□□□ -0.94
LTBP4-209ENST00000594116 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
LTBP4-209ENST00000594116 K7EQZ3 153 aa9.18□□□□□ -0.94
LTBP4-209ENST00000594116 LINC00313P59037 77 aa9.18□□□□□ -0.94
LTBP4-209ENST00000594116 CXCL6P80162 114 aa9.18□□□□□ -0.94
LTBP4-209ENST00000594116 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
LTBP4-209ENST00000594116 KRTAP16-1A8MUX0 517 aa9.16□□□□□ -0.94
LTBP4-209ENST00000594116 K7ERU9 68 aa9.15□□□□□ -0.94
LTBP4-209ENST00000594116 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
LTBP4-209ENST00000594116 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
LTBP4-209ENST00000594116 LINC00643Q86TS7 51 aa9.13□□□□□ -0.95
LTBP4-209ENST00000594116 Q8N9L7 120 aa9.13□□□□□ -0.95
LTBP4-209ENST00000594116 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
LTBP4-209ENST00000594116 C20orf166-AS1Q96NR2 134 aa9.11□□□□□ -0.95
LTBP4-209ENST00000594116 RPL37P61927 97 aaKnown RBP9.1□□□□□ -0.95
LTBP4-209ENST00000594116 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
LTBP4-209ENST00000594116 A8MUU9 505 aa9.09□□□□□ -0.95
LTBP4-209ENST00000594116 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
LTBP4-209ENST00000594116 Q75L30 129 aa9.09□□□□□ -0.95
LTBP4-209ENST00000594116 PCOTHQ58A44 107 aa9.07□□□□□ -0.96
LTBP4-209ENST00000594116 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
LTBP4-209ENST00000594116 TMEM254Q8TBM7 123 aa9.05□□□□□ -0.96
LTBP4-209ENST00000594116 hDV103S1A0JD37 113 aa9.04□□□□□ -0.96
LTBP4-209ENST00000594116 Q8N9P0 234 aaPredicted RBP9.04□□□□□ -0.96
LTBP4-209ENST00000594116 HCG22E2RYF7 251 aa9.02□□□□□ -0.97
LTBP4-209ENST00000594116 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
LTBP4-209ENST00000594116 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
LTBP4-209ENST00000594116 WFDC13Q8IUB5 93 aa9□□□□□ -0.97
LTBP4-209ENST00000594116 MT1HP80294 61 aa8.99□□□□□ -0.97
LTBP4-209ENST00000594116 HIST1H4AP62805 103 aaKnown RBP8.97□□□□□ -0.97
LTBP4-209ENST00000594116 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
LTBP4-209ENST00000594116 FSIP2Q5CZC0 6907 aa8.94□□□□□ -0.98
LTBP4-209ENST00000594116 A0A087WVE0 104 aa8.92□□□□□ -0.98
LTBP4-209ENST00000594116 MT-ATP8P03928 68 aa8.91□□□□□ -0.98
LTBP4-209ENST00000594116 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
LTBP4-209ENST00000594116 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
LTBP4-209ENST00000594116 IMUPQ9GZP8 106 aa8.89□□□□□ -0.99
LTBP4-209ENST00000594116 NDUFS5O43920 106 aa8.88□□□□□ -0.99
LTBP4-209ENST00000594116 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
LTBP4-209ENST00000594116 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
LTBP4-209ENST00000594116 COX6B2Q6YFQ2 88 aa8.81□□□□□ -1
LTBP4-209ENST00000594116 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
LTBP4-209ENST00000594116 Q5W150 140 aa8.8□□□□□ -1
LTBP4-209ENST00000594116 FLGP20930 4061 aaPredicted RBP8.79□□□□□ -1
LTBP4-209ENST00000594116 M0R2T5 61 aa8.79□□□□□ -1
LTBP4-209ENST00000594116 UQCRQO14949 82 aa8.72□□□□□ -1.01
LTBP4-209ENST00000594116 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
LTBP4-209ENST00000594116 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
LTBP4-209ENST00000594116 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
LTBP4-209ENST00000594116 SPINK7P58062 85 aa8.7□□□□□ -1.02
LTBP4-209ENST00000594116 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
LTBP4-209ENST00000594116 SCGB1A1P11684 91 aa8.67□□□□□ -1.02
LTBP4-209ENST00000594116 HRES1P13985 223 aa8.66□□□□□ -1.02
LTBP4-209ENST00000594116 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
LTBP4-209ENST00000594116 IGKV2-30P06310 120 aa8.65□□□□□ -1.02
LTBP4-209ENST00000594116 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
LTBP4-209ENST00000594116 H0Y9P7 68 aa8.62□□□□□ -1.03
LTBP4-209ENST00000594116 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
LTBP4-209ENST00000594116 ATOX1O00244 68 aa8.61□□□□□ -1.03
LTBP4-209ENST00000594116 SMIM20Q8N5G0 67 aa8.61□□□□□ -1.03
LTBP4-209ENST00000594116 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
LTBP4-209ENST00000594116 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
LTBP4-209ENST00000594116 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
LTBP4-209ENST00000594116 MP68P56378 58 aa8.55□□□□□ -1.04
LTBP4-209ENST00000594116 CYP4F30PQ9H0H9 118 aa8.55□□□□□ -1.04
LTBP4-209ENST00000594116 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
LTBP4-209ENST00000594116 H3BPC8 53 aa8.53□□□□□ -1.04
LTBP4-209ENST00000594116 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.05
LTBP4-209ENST00000594116 LINC00208Q96KT6 92 aa8.52□□□□□ -1.05
LTBP4-209ENST00000594116 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
LTBP4-209ENST00000594116 KRTAP9-8Q9BYQ0 159 aa8.48□□□□□ -1.05
LTBP4-209ENST00000594116 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
LTBP4-209ENST00000594116 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
LTBP4-209ENST00000594116 C4orf26Q17RF5 130 aa8.44□□□□□ -1.06
LTBP4-209ENST00000594116 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
LTBP4-209ENST00000594116 USH2AO75445 5202 aa8.38□□□□□ -1.07
LTBP4-209ENST00000594116 COX7CP15954 63 aa8.37□□□□□ -1.07
LTBP4-209ENST00000594116 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
LTBP4-209ENST00000594116 SSPOA2VEC9 5147 aa8.34□□□□□ -1.07
LTBP4-209ENST00000594116 MT2AP02795 61 aa8.34□□□□□ -1.07
LTBP4-209ENST00000594116 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
LTBP4-209ENST00000594116 C20orf197Q8N268 126 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms