RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 A0A0G2JQZ4 141 aa10□□□□□ -0.81
CIRBP-235ENST00000591935 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
CIRBP-235ENST00000591935 DSCR10P59022 87 aa9.99□□□□□ -0.81
CIRBP-235ENST00000591935 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
CIRBP-235ENST00000591935 TPRXLQ17RH7 258 aa9.98□□□□□ -0.81
CIRBP-235ENST00000591935 C9orf153Q5TBE3 101 aa9.98□□□□□ -0.81
CIRBP-235ENST00000591935 IGLV9-49A0A0B4J1Y8 123 aa9.95□□□□□ -0.82
CIRBP-235ENST00000591935 J3KT08 172 aa9.95□□□□□ -0.82
CIRBP-235ENST00000591935 Q8N9L7 120 aa9.94□□□□□ -0.82
CIRBP-235ENST00000591935 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
CIRBP-235ENST00000591935 SS18L2Q9UHA2 77 aa9.93□□□□□ -0.82
CIRBP-235ENST00000591935 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
CIRBP-235ENST00000591935 SSBP3-AS1Q7Z2R9 100 aa9.92□□□□□ -0.82
CIRBP-235ENST00000591935 MOBPQ13875 183 aa9.91□□□□□ -0.82
CIRBP-235ENST00000591935 SPINK1P00995 79 aa9.9□□□□□ -0.82
CIRBP-235ENST00000591935 CD164Q04900 197 aa9.9□□□□□ -0.82
CIRBP-235ENST00000591935 K7EQZ3 153 aa9.89□□□□□ -0.83
CIRBP-235ENST00000591935 A8MWP4 228 aa9.87□□□□□ -0.83
CIRBP-235ENST00000591935 OCR1Q9BZK8 76 aa9.86□□□□□ -0.83
CIRBP-235ENST00000591935 HCG22E2RYF7 251 aa9.85□□□□□ -0.83
CIRBP-235ENST00000591935 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
CIRBP-235ENST00000591935 MUC17Q685J3 4493 aa9.85□□□□□ -0.83
CIRBP-235ENST00000591935 RPS29P62273 56 aaKnown RBP9.83□□□□□ -0.84
CIRBP-235ENST00000591935 NDUFB1O75438 58 aa9.82□□□□□ -0.84
CIRBP-235ENST00000591935 DEFB116Q30KQ4 102 aa9.82□□□□□ -0.84
CIRBP-235ENST00000591935 FAT4Q6V0I7 4981 aa9.82□□□□□ -0.84
CIRBP-235ENST00000591935 Q96NJ1 140 aa9.81□□□□□ -0.84
CIRBP-235ENST00000591935 KLKP1Q107X0 134 aa9.8□□□□□ -0.84
CIRBP-235ENST00000591935 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
CIRBP-235ENST00000591935 KRTAP13-3Q3SY46 172 aa9.78□□□□□ -0.84
CIRBP-235ENST00000591935 ASB16-AS1Q495Z4 193 aa9.78□□□□□ -0.84
CIRBP-235ENST00000591935 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
CIRBP-235ENST00000591935 KRTAP9-2Q9BYQ4 174 aa9.77□□□□□ -0.85
CIRBP-235ENST00000591935 NDUFC1O43677 76 aa9.76□□□□□ -0.85
CIRBP-235ENST00000591935 TMEM258P61165 79 aa9.76□□□□□ -0.85
CIRBP-235ENST00000591935 Q5XG85 94 aa9.74□□□□□ -0.85
CIRBP-235ENST00000591935 LCE2AQ5TA79 106 aaPredicted RBP9.73□□□□□ -0.85
CIRBP-235ENST00000591935 CASC2Q6XLA1 102 aa9.73□□□□□ -0.85
CIRBP-235ENST00000591935 TMEM254Q8TBM7 123 aa9.73□□□□□ -0.85
CIRBP-235ENST00000591935 C5orf47Q569G3 176 aa9.72□□□□□ -0.85
CIRBP-235ENST00000591935 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
CIRBP-235ENST00000591935 WFDC13Q8IUB5 93 aa9.71□□□□□ -0.86
CIRBP-235ENST00000591935 MMP24-AS1A0A0U1RRL7 71 aa9.7□□□□□ -0.86
CIRBP-235ENST00000591935 SEC61BP60468 96 aaKnown RBP9.7□□□□□ -0.86
CIRBP-235ENST00000591935 A0A1B0GVX0 72 aa9.69□□□□□ -0.86
CIRBP-235ENST00000591935 H7BZZ5 65 aa9.67□□□□□ -0.86
CIRBP-235ENST00000591935 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
CIRBP-235ENST00000591935 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
CIRBP-235ENST00000591935 LIMD2Q9BT23 127 aa9.66□□□□□ -0.86
CIRBP-235ENST00000591935 SNURFQ9Y675 71 aa9.66□□□□□ -0.86
CIRBP-235ENST00000591935 H3BPC8 53 aa9.63□□□□□ -0.87
CIRBP-235ENST00000591935 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
CIRBP-235ENST00000591935 KRTAP9-6A0A140TA67 174 aa9.62□□□□□ -0.87
CIRBP-235ENST00000591935 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
CIRBP-235ENST00000591935 TP53AIP1Q9HCN2 124 aa9.62□□□□□ -0.87
CIRBP-235ENST00000591935 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
CIRBP-235ENST00000591935 MP68P56378 58 aa9.61□□□□□ -0.87
CIRBP-235ENST00000591935 XP32Q5T750 250 aa9.61□□□□□ -0.87
CIRBP-235ENST00000591935 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
CIRBP-235ENST00000591935 ATP5EP56381 51 aaPredicted RBP9.6□□□□□ -0.87
CIRBP-235ENST00000591935 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
CIRBP-235ENST00000591935 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
CIRBP-235ENST00000591935 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
CIRBP-235ENST00000591935 MRPL34Q9BQ48 92 aaKnown RBP9.57□□□□□ -0.88
CIRBP-235ENST00000591935 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
CIRBP-235ENST00000591935 H0Y9P7 68 aa9.52□□□□□ -0.89
CIRBP-235ENST00000591935 TRAV22A0A0B4J277 110 aa9.49□□□□□ -0.89
CIRBP-235ENST00000591935 NOTCH2NLQ7Z3S9 236 aa9.48□□□□□ -0.89
CIRBP-235ENST00000591935 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
CIRBP-235ENST00000591935 LINC00313P59037 77 aa9.47□□□□□ -0.89
CIRBP-235ENST00000591935 SERP1Q9Y6X1 66 aa9.47□□□□□ -0.89
CIRBP-235ENST00000591935 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
CIRBP-235ENST00000591935 NDUFS5O43920 106 aa9.44□□□□□ -0.9
CIRBP-235ENST00000591935 C1orf64Q8NEQ6 169 aa9.44□□□□□ -0.9
CIRBP-235ENST00000591935 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
CIRBP-235ENST00000591935 Q8N9P0 234 aaPredicted RBP9.4□□□□□ -0.9
CIRBP-235ENST00000591935 SPANXA2-OT1Q8N9U9 137 aa9.4□□□□□ -0.9
CIRBP-235ENST00000591935 LCE2CQ5TA81 110 aa9.39□□□□□ -0.91
CIRBP-235ENST00000591935 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
CIRBP-235ENST00000591935 KRTAP16-1A8MUX0 517 aa9.35□□□□□ -0.91
CIRBP-235ENST00000591935 KRTAP19-2Q3LHN2 52 aa9.35□□□□□ -0.91
CIRBP-235ENST00000591935 LOC101927531A0A1B0GV80 90 aa9.33□□□□□ -0.92
CIRBP-235ENST00000591935 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
CIRBP-235ENST00000591935 LCE2DQ5TA82 110 aaPredicted RBP9.28□□□□□ -0.92
CIRBP-235ENST00000591935 Q5W150 140 aa9.28□□□□□ -0.92
CIRBP-235ENST00000591935 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
CIRBP-235ENST00000591935 MT1HP80294 61 aa9.25□□□□□ -0.93
CIRBP-235ENST00000591935 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
CIRBP-235ENST00000591935 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
CIRBP-235ENST00000591935 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
CIRBP-235ENST00000591935 FSIP2Q5CZC0 6907 aa9.16□□□□□ -0.94
CIRBP-235ENST00000591935 ATP11AUNQ6ZP68 121 aa9.15□□□□□ -0.94
CIRBP-235ENST00000591935 Q75L30 129 aa9.14□□□□□ -0.95
CIRBP-235ENST00000591935 C20orf166-AS1Q96NR2 134 aa9.14□□□□□ -0.95
CIRBP-235ENST00000591935 A8MUU9 505 aa9.13□□□□□ -0.95
CIRBP-235ENST00000591935 M0R2T5 61 aa9.12□□□□□ -0.95
CIRBP-235ENST00000591935 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
CIRBP-235ENST00000591935 KRTAP10-6P60371 365 aaPredicted RBP9.08□□□□□ -0.96
CIRBP-235ENST00000591935 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
CIRBP-235ENST00000591935 HRES1P13985 223 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms