RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 DEFB116Q30KQ4 102 aa5.48□□□□□ -1.53
VPS25-205ENST00000590339 ASB16-AS1Q495Z4 193 aa5.47□□□□□ -1.53
VPS25-205ENST00000590339 HRCT1Q6UXD1 115 aa5.47□□□□□ -1.53
VPS25-205ENST00000590339 PRR15Q8IV56 129 aa5.47□□□□□ -1.53
VPS25-205ENST00000590339 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.53
VPS25-205ENST00000590339 HCG22E2RYF7 251 aa5.46□□□□□ -1.54
VPS25-205ENST00000590339 Q5XG85 94 aa5.46□□□□□ -1.54
VPS25-205ENST00000590339 OCR1Q9BZK8 76 aa5.45□□□□□ -1.54
VPS25-205ENST00000590339 MMP24-AS1A0A0U1RRL7 71 aa5.43□□□□□ -1.54
VPS25-205ENST00000590339 KRTAP10-8P60410 259 aa5.43□□□□□ -1.54
VPS25-205ENST00000590339 A0A1B0GVX0 72 aa5.41□□□□□ -1.54
VPS25-205ENST00000590339 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.54
VPS25-205ENST00000590339 NDUFB1O75438 58 aa5.4□□□□□ -1.54
VPS25-205ENST00000590339 WFDC13Q8IUB5 93 aa5.4□□□□□ -1.54
VPS25-205ENST00000590339 PRR26Q8N8Z3 221 aa5.4□□□□□ -1.54
VPS25-205ENST00000590339 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
VPS25-205ENST00000590339 KLKP1Q107X0 134 aa5.39□□□□□ -1.55
VPS25-205ENST00000590339 CASC2Q6XLA1 102 aa5.39□□□□□ -1.55
VPS25-205ENST00000590339 TYMSOSQ8TAI1 123 aa5.39□□□□□ -1.55
VPS25-205ENST00000590339 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
VPS25-205ENST00000590339 C8orf17Q9NRJ1 99 aa5.39□□□□□ -1.55
VPS25-205ENST00000590339 RPS29P62273 56 aaKnown RBP5.38□□□□□ -1.55
VPS25-205ENST00000590339 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
VPS25-205ENST00000590339 C20orf197Q8N268 126 aa5.37□□□□□ -1.55
VPS25-205ENST00000590339 TNXBP22105 4242 aa5.37□□□□□ -1.55
VPS25-205ENST00000590339 SPINK1P00995 79 aa5.36□□□□□ -1.55
VPS25-205ENST00000590339 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
VPS25-205ENST00000590339 A0A0U1RQV1 116 aa5.35□□□□□ -1.55
VPS25-205ENST00000590339 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
VPS25-205ENST00000590339 LINC00304Q8N9R0 145 aa5.35□□□□□ -1.55
VPS25-205ENST00000590339 TMEM254Q8TBM7 123 aa5.35□□□□□ -1.55
VPS25-205ENST00000590339 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
VPS25-205ENST00000590339 SPAG11AQ6PDA7 123 aa5.34□□□□□ -1.55
VPS25-205ENST00000590339 C4orf48Q5BLP8 95 aa5.33□□□□□ -1.56
VPS25-205ENST00000590339 NOTCH2NLQ7Z3S9 236 aa5.33□□□□□ -1.56
VPS25-205ENST00000590339 H7BZZ5 65 aa5.32□□□□□ -1.56
VPS25-205ENST00000590339 TMEM258P61165 79 aa5.32□□□□□ -1.56
VPS25-205ENST00000590339 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
VPS25-205ENST00000590339 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
VPS25-205ENST00000590339 C5orf47Q569G3 176 aa5.31□□□□□ -1.56
VPS25-205ENST00000590339 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
VPS25-205ENST00000590339 NDUFC1O43677 76 aa5.3□□□□□ -1.56
VPS25-205ENST00000590339 TP53AIP1Q9HCN2 124 aa5.29□□□□□ -1.56
VPS25-205ENST00000590339 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
VPS25-205ENST00000590339 H3BPC8 53 aa5.28□□□□□ -1.56
VPS25-205ENST00000590339 LRP2P98164 4655 aa5.27□□□□□ -1.57
VPS25-205ENST00000590339 TRAV22A0A0B4J277 110 aa5.27□□□□□ -1.57
VPS25-205ENST00000590339 H0Y9P7 68 aa5.27□□□□□ -1.57
VPS25-205ENST00000590339 PRR4Q16378 134 aa5.27□□□□□ -1.57
VPS25-205ENST00000590339 MP68P56378 58 aa5.26□□□□□ -1.57
VPS25-205ENST00000590339 RNF213Q63HN8 5207 aa5.25□□□□□ -1.57
VPS25-205ENST00000590339 FAM236DA0A1B0GTK5 79 aa5.25□□□□□ -1.57
VPS25-205ENST00000590339 FAM236CP0DP71 79 aa5.25□□□□□ -1.57
VPS25-205ENST00000590339 LINC00313P59037 77 aa5.25□□□□□ -1.57
VPS25-205ENST00000590339 KRTAP13-3Q3SY46 172 aa5.25□□□□□ -1.57
VPS25-205ENST00000590339 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
VPS25-205ENST00000590339 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
VPS25-205ENST00000590339 NDUFS5O43920 106 aa5.22□□□□□ -1.57
VPS25-205ENST00000590339 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
VPS25-205ENST00000590339 LPAP08519 4548 aa5.21□□□□□ -1.58
VPS25-205ENST00000590339 C1orf64Q8NEQ6 169 aa5.2□□□□□ -1.58
VPS25-205ENST00000590339 Q5W150 140 aa5.19□□□□□ -1.58
VPS25-205ENST00000590339 RETNLBQ9BQ08 111 aa5.18□□□□□ -1.58
VPS25-205ENST00000590339 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
VPS25-205ENST00000590339 LOC101927531A0A1B0GV80 90 aa5.16□□□□□ -1.58
VPS25-205ENST00000590339 SPANXA2-OT1Q8N9U9 137 aa5.16□□□□□ -1.58
VPS25-205ENST00000590339 CYP4F30PQ9H0H9 118 aa5.15□□□□□ -1.59
VPS25-205ENST00000590339 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
VPS25-205ENST00000590339 FP248Q71RG6 208 aaPredicted RBP5.14□□□□□ -1.59
VPS25-205ENST00000590339 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
VPS25-205ENST00000590339 A8MUU9 505 aa5.13□□□□□ -1.59
VPS25-205ENST00000590339 IGLV7-46A0A075B6I9 117 aa5.11□□□□□ -1.59
VPS25-205ENST00000590339 IGKV2-30P06310 120 aa5.11□□□□□ -1.59
VPS25-205ENST00000590339 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
VPS25-205ENST00000590339 PCOTHQ58A44 107 aa5.09□□□□□ -1.59
VPS25-205ENST00000590339 Q75L30 129 aa5.07□□□□□ -1.6
VPS25-205ENST00000590339 MUC2Q02817 5179 aa5.05□□□□□ -1.6
VPS25-205ENST00000590339 TPRXLQ17RH7 258 aa5.04□□□□□ -1.6
VPS25-205ENST00000590339 HRES1P13985 223 aa5.03□□□□□ -1.6
VPS25-205ENST00000590339 C7orf65Q6ZTY9 151 aa5.03□□□□□ -1.6
VPS25-205ENST00000590339 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
VPS25-205ENST00000590339 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
VPS25-205ENST00000590339 XP32Q5T750 250 aa5.01□□□□□ -1.61
VPS25-205ENST00000590339 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
VPS25-205ENST00000590339 DMAC1Q96GE9 116 aa5□□□□□ -1.61
VPS25-205ENST00000590339 COA5Q86WW8 74 aa4.99□□□□□ -1.61
VPS25-205ENST00000590339 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
VPS25-205ENST00000590339 SPINK7P58062 85 aa4.93□□□□□ -1.62
VPS25-205ENST00000590339 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
VPS25-205ENST00000590339 ACYP2P14621 99 aa4.92□□□□□ -1.62
VPS25-205ENST00000590339 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
VPS25-205ENST00000590339 ATP11AUNQ6ZP68 121 aa4.92□□□□□ -1.62
VPS25-205ENST00000590339 A8MUN3 132 aa4.91□□□□□ -1.62
VPS25-205ENST00000590339 Q1T7F1 81 aa4.91□□□□□ -1.62
VPS25-205ENST00000590339 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
VPS25-205ENST00000590339 C4orf26Q17RF5 130 aa4.88□□□□□ -1.63
VPS25-205ENST00000590339 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
VPS25-205ENST00000590339 MPLKIPQ8TAP9 179 aa4.87□□□□□ -1.63
VPS25-205ENST00000590339 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
VPS25-205ENST00000590339 V9GYY9 64 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms