RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
DDX39A-212ENST00000590260 A0A1W2PPM0 123 aa9.38□□□□□ -0.91
DDX39A-212ENST00000590260 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
DDX39A-212ENST00000590260 MTURNQ8N3F0 131 aa9.36□□□□□ -0.91
DDX39A-212ENST00000590260 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
DDX39A-212ENST00000590260 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
DDX39A-212ENST00000590260 C21orf62-AS1Q17RA5 79 aa9.33□□□□□ -0.92
DDX39A-212ENST00000590260 COX6B2Q6YFQ2 88 aa9.33□□□□□ -0.92
DDX39A-212ENST00000590260 A0A1B0GW54 56 aa9.31□□□□□ -0.92
DDX39A-212ENST00000590260 C8orf87E5RJ46 101 aa9.31□□□□□ -0.92
DDX39A-212ENST00000590260 H3BT86 120 aa9.31□□□□□ -0.92
DDX39A-212ENST00000590260 PDE6GP18545 87 aa9.31□□□□□ -0.92
DDX39A-212ENST00000590260 J3KT08 172 aa9.3□□□□□ -0.92
DDX39A-212ENST00000590260 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
DDX39A-212ENST00000590260 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
DDX39A-212ENST00000590260 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
DDX39A-212ENST00000590260 A8MWP4 228 aa9.25□□□□□ -0.93
DDX39A-212ENST00000590260 HRES1P13985 223 aa9.24□□□□□ -0.93
DDX39A-212ENST00000590260 SPCS1Q9Y6A9 102 aa9.24□□□□□ -0.93
DDX39A-212ENST00000590260 MPLKIPQ8TAP9 179 aa9.23□□□□□ -0.93
DDX39A-212ENST00000590260 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
DDX39A-212ENST00000590260 M0R2T5 61 aa9.22□□□□□ -0.93
DDX39A-212ENST00000590260 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
DDX39A-212ENST00000590260 NREPQ16612 68 aa9.2□□□□□ -0.94
DDX39A-212ENST00000590260 NDUFB1O75438 58 aa9.19□□□□□ -0.94
DDX39A-212ENST00000590260 PRO0461Q9UI25 63 aa9.19□□□□□ -0.94
DDX39A-212ENST00000590260 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
DDX39A-212ENST00000590260 PRR15Q8IV56 129 aa9.18□□□□□ -0.94
DDX39A-212ENST00000590260 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
DDX39A-212ENST00000590260 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.94
DDX39A-212ENST00000590260 K7EQZ3 153 aa9.14□□□□□ -0.95
DDX39A-212ENST00000590260 KRTAP9-6A0A140TA67 174 aa9.13□□□□□ -0.95
DDX39A-212ENST00000590260 Q6ZVQ6 151 aa9.13□□□□□ -0.95
DDX39A-212ENST00000590260 K7EP34 96 aa9.12□□□□□ -0.95
DDX39A-212ENST00000590260 SPINK7P58062 85 aa9.08□□□□□ -0.96
DDX39A-212ENST00000590260 KRTAP9-8Q9BYQ0 159 aa9.08□□□□□ -0.96
DDX39A-212ENST00000590260 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
DDX39A-212ENST00000590260 PCP4L1A6NKN8 68 aa9.06□□□□□ -0.96
DDX39A-212ENST00000590260 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
DDX39A-212ENST00000590260 BPY2O14599 106 aa9.04□□□□□ -0.96
DDX39A-212ENST00000590260 Q8N9L7 120 aa9.04□□□□□ -0.96
DDX39A-212ENST00000590260 FAM236DA0A1B0GTK5 79 aa9.03□□□□□ -0.96
DDX39A-212ENST00000590260 FAM236CP0DP71 79 aa9.03□□□□□ -0.96
DDX39A-212ENST00000590260 RBM12B-AS1Q9P1G2 102 aa9.03□□□□□ -0.96
DDX39A-212ENST00000590260 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
DDX39A-212ENST00000590260 LINC00846Q9NV44 126 aa9.02□□□□□ -0.97
DDX39A-212ENST00000590260 CRCT1Q9UGL9 99 aa8.98□□□□□ -0.97
DDX39A-212ENST00000590260 Q5W150 140 aa8.96□□□□□ -0.98
DDX39A-212ENST00000590260 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.98
DDX39A-212ENST00000590260 WFDC13Q8IUB5 93 aa8.95□□□□□ -0.98
DDX39A-212ENST00000590260 MT2AP02795 61 aa8.94□□□□□ -0.98
DDX39A-212ENST00000590260 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
DDX39A-212ENST00000590260 NDUFS5O43920 106 aa8.92□□□□□ -0.98
DDX39A-212ENST00000590260 F8W1H4 67 aa8.91□□□□□ -0.98
DDX39A-212ENST00000590260 ETDBQ3ZM63 59 aa8.91□□□□□ -0.98
DDX39A-212ENST00000590260 CASC2Q6XLA1 102 aa8.91□□□□□ -0.98
DDX39A-212ENST00000590260 MT1FP04733 61 aa8.89□□□□□ -0.99
DDX39A-212ENST00000590260 UBL5Q9BZL1 73 aa8.89□□□□□ -0.99
DDX39A-212ENST00000590260 HCG22E2RYF7 251 aa8.86□□□□□ -0.99
DDX39A-212ENST00000590260 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
DDX39A-212ENST00000590260 IGKV2-30P06310 120 aa8.81□□□□□ -1
DDX39A-212ENST00000590260 USH2AO75445 5202 aa8.8□□□□□ -1
DDX39A-212ENST00000590260 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
DDX39A-212ENST00000590260 C7orf65Q6ZTY9 151 aa8.77□□□□□ -1.01
DDX39A-212ENST00000590260 CXCL6P80162 114 aa8.76□□□□□ -1.01
DDX39A-212ENST00000590260 LCE2BO14633 110 aa8.74□□□□□ -1.01
DDX39A-212ENST00000590260 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
DDX39A-212ENST00000590260 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
DDX39A-212ENST00000590260 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
DDX39A-212ENST00000590260 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
DDX39A-212ENST00000590260 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
DDX39A-212ENST00000590260 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
DDX39A-212ENST00000590260 ACYP1P07311 99 aa8.63□□□□□ -1.03
DDX39A-212ENST00000590260 A0A1B0GV90 55 aa8.62□□□□□ -1.03
DDX39A-212ENST00000590260 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
DDX39A-212ENST00000590260 ATP5EP2Q5VTU8 51 aa8.52□□□□□ -1.05
DDX39A-212ENST00000590260 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
DDX39A-212ENST00000590260 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
DDX39A-212ENST00000590260 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
DDX39A-212ENST00000590260 A0A087WVE0 104 aa8.48□□□□□ -1.05
DDX39A-212ENST00000590260 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
DDX39A-212ENST00000590260 TRAV22A0A0B4J277 110 aa8.46□□□□□ -1.06
DDX39A-212ENST00000590260 FCGBPQ9Y6R7 5405 aaPredicted RBP8.46□□□□□ -1.06
DDX39A-212ENST00000590260 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
DDX39A-212ENST00000590260 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
DDX39A-212ENST00000590260 LCA10Q71F78 164 aa8.44□□□□□ -1.06
DDX39A-212ENST00000590260 S4R3F8 94 aa8.43□□□□□ -1.06
DDX39A-212ENST00000590260 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
DDX39A-212ENST00000590260 LOC101927531A0A1B0GV80 90 aa8.4□□□□□ -1.06
DDX39A-212ENST00000590260 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.39□□□□□ -1.07
DDX39A-212ENST00000590260 UQCRQO14949 82 aa8.39□□□□□ -1.07
DDX39A-212ENST00000590260 H0Y9P7 68 aa8.37□□□□□ -1.07
DDX39A-212ENST00000590260 KRTAP19-6Q3LI70 58 aa8.37□□□□□ -1.07
DDX39A-212ENST00000590260 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
DDX39A-212ENST00000590260 OCR1Q9BZK8 76 aa8.32□□□□□ -1.08
DDX39A-212ENST00000590260 ATOX1O00244 68 aa8.29□□□□□ -1.08
DDX39A-212ENST00000590260 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
DDX39A-212ENST00000590260 FAM236AA0A1B0GUQ0 79 aa8.24□□□□□ -1.09
DDX39A-212ENST00000590260 FAM236BA0A1B0GV22 79 aa8.24□□□□□ -1.09
DDX39A-212ENST00000590260 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms