RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 KRTDAPP60985 99 aa5.74□□□□□ -1.49
NEDD4L-227ENST00000590020 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
NEDD4L-227ENST00000590020 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
NEDD4L-227ENST00000590020 A0A1B0GVX0 72 aa5.72□□□□□ -1.49
NEDD4L-227ENST00000590020 FABP2P12104 132 aa5.72□□□□□ -1.49
NEDD4L-227ENST00000590020 C8orf87E5RJ46 101 aa5.71□□□□□ -1.5
NEDD4L-227ENST00000590020 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
NEDD4L-227ENST00000590020 TRBV7-4A0A0J9YYF1 115 aa5.69□□□□□ -1.5
NEDD4L-227ENST00000590020 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
NEDD4L-227ENST00000590020 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
NEDD4L-227ENST00000590020 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
NEDD4L-227ENST00000590020 LYRM7Q5U5X0 104 aa5.68□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BKO60814 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BJP06899 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BOP23527 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BBP33778 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BDP58876 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BCP62807 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST2H2BEQ16778 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BHQ93079 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BNQ99877 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 HIST1H2BMQ99879 126 aa5.67□□□□□ -1.5
NEDD4L-227ENST00000590020 SNCGO76070 127 aa5.65□□□□□ -1.5
NEDD4L-227ENST00000590020 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
NEDD4L-227ENST00000590020 SPRR2GQ9BYE4 73 aa5.63□□□□□ -1.51
NEDD4L-227ENST00000590020 TRACP01848 142 aa5.62□□□□□ -1.51
NEDD4L-227ENST00000590020 CCKP06307 115 aa5.62□□□□□ -1.51
NEDD4L-227ENST00000590020 IMUPQ9GZP8 106 aa5.62□□□□□ -1.51
NEDD4L-227ENST00000590020 H0YGX0 51 aa5.61□□□□□ -1.51
NEDD4L-227ENST00000590020 IGKV3D-7A0A0C4DH55 119 aa5.6□□□□□ -1.51
NEDD4L-227ENST00000590020 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
NEDD4L-227ENST00000590020 SPRR2DP22532 72 aa5.59□□□□□ -1.51
NEDD4L-227ENST00000590020 C5orf47Q569G3 176 aa5.59□□□□□ -1.51
NEDD4L-227ENST00000590020 HIST1H4GQ99525 98 aa5.59□□□□□ -1.51
NEDD4L-227ENST00000590020 VPS25Q9BRG1 176 aa5.58□□□□□ -1.52
NEDD4L-227ENST00000590020 DSCR8Q96T75 97 aa5.56□□□□□ -1.52
NEDD4L-227ENST00000590020 C8orf17Q9NRJ1 99 aa5.55□□□□□ -1.52
NEDD4L-227ENST00000590020 SNRPEP62304 92 aaKnown RBP5.53□□□□□ -1.52
NEDD4L-227ENST00000590020 A0A1B0GX51 115 aa5.52□□□□□ -1.53
NEDD4L-227ENST00000590020 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
NEDD4L-227ENST00000590020 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 J3KT08 172 aa5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 NDUFB1O75438 58 aa5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 IGKV2-30P06310 120 aa5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 RBM3P98179 157 aaKnown RBP5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 Q6ZVQ6 151 aa5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 ORMDL1Q9P0S3 153 aa5.5□□□□□ -1.53
NEDD4L-227ENST00000590020 HSBP1L1C9JCN9 74 aa5.48□□□□□ -1.53
NEDD4L-227ENST00000590020 A0A0B4J2C4 111 aa5.47□□□□□ -1.53
NEDD4L-227ENST00000590020 TRIAP1O43715 76 aa5.47□□□□□ -1.53
NEDD4L-227ENST00000590020 C4orf26Q17RF5 130 aa5.47□□□□□ -1.53
NEDD4L-227ENST00000590020 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
NEDD4L-227ENST00000590020 DNAL4O96015 105 aa5.46□□□□□ -1.54
NEDD4L-227ENST00000590020 KLKP1Q107X0 134 aa5.45□□□□□ -1.54
NEDD4L-227ENST00000590020 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
NEDD4L-227ENST00000590020 S100A1P23297 94 aa5.43□□□□□ -1.54
NEDD4L-227ENST00000590020 C2orf91Q6ZV80 131 aa5.43□□□□□ -1.54
NEDD4L-227ENST00000590020 NDUFS5O43920 106 aa5.42□□□□□ -1.54
NEDD4L-227ENST00000590020 Q6ZQT0 140 aa5.42□□□□□ -1.54
NEDD4L-227ENST00000590020 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
NEDD4L-227ENST00000590020 C7orf65Q6ZTY9 151 aa5.41□□□□□ -1.54
NEDD4L-227ENST00000590020 MRPL34Q9BQ48 92 aaKnown RBP5.41□□□□□ -1.54
NEDD4L-227ENST00000590020 PRO1854Q9UHT4 67 aa5.41□□□□□ -1.54
NEDD4L-227ENST00000590020 S4R3F8 94 aa5.41□□□□□ -1.54
NEDD4L-227ENST00000590020 Q5W150 140 aa5.4□□□□□ -1.54
NEDD4L-227ENST00000590020 H3BQ85 93 aa5.39□□□□□ -1.55
NEDD4L-227ENST00000590020 COX8AP10176 69 aa5.39□□□□□ -1.55
NEDD4L-227ENST00000590020 UBE2V1Q13404 147 aa5.39□□□□□ -1.55
NEDD4L-227ENST00000590020 LCA10Q71F78 164 aa5.39□□□□□ -1.55
NEDD4L-227ENST00000590020 MMP24-AS1A0A0U1RRL7 71 aa5.38□□□□□ -1.55
NEDD4L-227ENST00000590020 TMEM254Q8TBM7 123 aa5.38□□□□□ -1.55
NEDD4L-227ENST00000590020 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
NEDD4L-227ENST00000590020 CEND1Q8N111 149 aa5.36□□□□□ -1.55
NEDD4L-227ENST00000590020 MT1XP80297 61 aa5.35□□□□□ -1.55
NEDD4L-227ENST00000590020 HIST3H2BBQ8N257 126 aa5.35□□□□□ -1.55
NEDD4L-227ENST00000590020 C14orf144Q96I85 54 aa5.35□□□□□ -1.55
NEDD4L-227ENST00000590020 HIST1H2BLQ99880 126 aa5.35□□□□□ -1.55
NEDD4L-227ENST00000590020 C9JAW5 83 aa5.34□□□□□ -1.55
NEDD4L-227ENST00000590020 PSMB2P49721 201 aa5.34□□□□□ -1.55
NEDD4L-227ENST00000590020 DLEU1O43261 78 aa5.33□□□□□ -1.56
NEDD4L-227ENST00000590020 S100A2P29034 98 aa5.33□□□□□ -1.56
NEDD4L-227ENST00000590020 hDV103S1A0JD37 113 aa5.32□□□□□ -1.56
NEDD4L-227ENST00000590020 FXYD2P54710 66 aa5.32□□□□□ -1.56
NEDD4L-227ENST00000590020 C21orf62-AS1Q17RA5 79 aa5.31□□□□□ -1.56
NEDD4L-227ENST00000590020 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
NEDD4L-227ENST00000590020 HIGD1BQ9P298 99 aa5.31□□□□□ -1.56
NEDD4L-227ENST00000590020 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
NEDD4L-227ENST00000590020 K7EQZ3 153 aa5.29□□□□□ -1.56
NEDD4L-227ENST00000590020 K7ERJ3 54 aa5.29□□□□□ -1.56
NEDD4L-227ENST00000590020 S100A6P06703 90 aa5.28□□□□□ -1.56
NEDD4L-227ENST00000590020 CRIPTQ9P021 101 aa5.28□□□□□ -1.56
NEDD4L-227ENST00000590020 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
NEDD4L-227ENST00000590020 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
NEDD4L-227ENST00000590020 COX6CP09669 75 aa5.25□□□□□ -1.57
NEDD4L-227ENST00000590020 BAALC-AS2P0C853 105 aa5.23□□□□□ -1.57
NEDD4L-227ENST00000590020 PAM16Q9Y3D7 125 aa5.23□□□□□ -1.57
NEDD4L-227ENST00000590020 NREPQ16612 68 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms