RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 HIST3H2BBQ8N257 126 aa7.04□□□□□ -1.28
IFT20-216ENST00000588477 VPS25Q9BRG1 176 aa7.04□□□□□ -1.28
IFT20-216ENST00000588477 S100A2P29034 98 aa7.03□□□□□ -1.28
IFT20-216ENST00000588477 TMEM256-PLSCR3K7ERE1 68 aa7.02□□□□□ -1.29
IFT20-216ENST00000588477 TRIAP1O43715 76 aa7.02□□□□□ -1.29
IFT20-216ENST00000588477 PRO1854Q9UHT4 67 aa7.02□□□□□ -1.29
IFT20-216ENST00000588477 H3BQ85 93 aa7.01□□□□□ -1.29
IFT20-216ENST00000588477 DLEU1O43261 78 aa7.01□□□□□ -1.29
IFT20-216ENST00000588477 J3KT08 172 aa7□□□□□ -1.29
IFT20-216ENST00000588477 C14orf144Q96I85 54 aa6.98□□□□□ -1.29
IFT20-216ENST00000588477 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
IFT20-216ENST00000588477 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
IFT20-216ENST00000588477 NDUFB1O75438 58 aa6.97□□□□□ -1.29
IFT20-216ENST00000588477 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
IFT20-216ENST00000588477 MT1BP07438 61 aa6.96□□□□□ -1.3
IFT20-216ENST00000588477 CEND1Q8N111 149 aa6.96□□□□□ -1.3
IFT20-216ENST00000588477 DSCR8Q96T75 97 aa6.96□□□□□ -1.3
IFT20-216ENST00000588477 C8orf17Q9NRJ1 99 aa6.96□□□□□ -1.3
IFT20-216ENST00000588477 UBE2V1Q13404 147 aa6.95□□□□□ -1.3
IFT20-216ENST00000588477 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
IFT20-216ENST00000588477 A6NJY4 79 aa6.93□□□□□ -1.3
IFT20-216ENST00000588477 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
IFT20-216ENST00000588477 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
IFT20-216ENST00000588477 PSMB2P49721 201 aa6.92□□□□□ -1.3
IFT20-216ENST00000588477 Q5VV11 94 aa6.92□□□□□ -1.3
IFT20-216ENST00000588477 FXYD2P54710 66 aa6.91□□□□□ -1.3
IFT20-216ENST00000588477 Q6ZVQ6 151 aa6.91□□□□□ -1.3
IFT20-216ENST00000588477 MDN1Q9NU22 5596 aa6.91□□□□□ -1.3
IFT20-216ENST00000588477 KRTAP10-5P60370 271 aa6.9□□□□□ -1.3
IFT20-216ENST00000588477 Q6ZQT0 140 aa6.9□□□□□ -1.3
IFT20-216ENST00000588477 KMT2DO14686 5537 aa6.9□□□□□ -1.31
IFT20-216ENST00000588477 FAM236AA0A1B0GUQ0 79 aa6.89□□□□□ -1.31
IFT20-216ENST00000588477 FAM236BA0A1B0GV22 79 aa6.89□□□□□ -1.31
IFT20-216ENST00000588477 KRTAP2-3P0C7H8 128 aa6.89□□□□□ -1.31
IFT20-216ENST00000588477 KRTAP2-4Q9BYR9 128 aa6.89□□□□□ -1.31
IFT20-216ENST00000588477 C21orf62-AS1Q17RA5 79 aa6.88□□□□□ -1.31
IFT20-216ENST00000588477 PAM16Q9Y3D7 125 aa6.88□□□□□ -1.31
IFT20-216ENST00000588477 COX6CP09669 75 aa6.87□□□□□ -1.31
IFT20-216ENST00000588477 SPATA45Q537H7 98 aa6.87□□□□□ -1.31
IFT20-216ENST00000588477 C9JAW5 83 aa6.86□□□□□ -1.31
IFT20-216ENST00000588477 S100A6P06703 90 aa6.86□□□□□ -1.31
IFT20-216ENST00000588477 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
IFT20-216ENST00000588477 IGKV2D-30A0A075B6S6 120 aa6.82□□□□□ -1.32
IFT20-216ENST00000588477 K7ERJ3 54 aa6.82□□□□□ -1.32
IFT20-216ENST00000588477 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
IFT20-216ENST00000588477 C5orf47Q569G3 176 aa6.82□□□□□ -1.32
IFT20-216ENST00000588477 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
IFT20-216ENST00000588477 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
IFT20-216ENST00000588477 TMEM254Q8TBM7 123 aa6.8□□□□□ -1.32
IFT20-216ENST00000588477 NDUFS5O43920 106 aa6.79□□□□□ -1.32
IFT20-216ENST00000588477 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
IFT20-216ENST00000588477 VAMP8Q9BV40 100 aa6.79□□□□□ -1.32
IFT20-216ENST00000588477 MMP24-AS1A0A0U1RRL7 71 aa6.78□□□□□ -1.32
IFT20-216ENST00000588477 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
IFT20-216ENST00000588477 BAALC-AS2P0C853 105 aa6.76□□□□□ -1.33
IFT20-216ENST00000588477 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
IFT20-216ENST00000588477 SCGB1C2P0DMR2 95 aa6.74□□□□□ -1.33
IFT20-216ENST00000588477 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
IFT20-216ENST00000588477 S100A1P23297 94 aa6.73□□□□□ -1.33
IFT20-216ENST00000588477 Q5W150 140 aa6.73□□□□□ -1.33
IFT20-216ENST00000588477 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
IFT20-216ENST00000588477 A0A1B0GW54 56 aa6.72□□□□□ -1.33
IFT20-216ENST00000588477 HSD52Q0P140 79 aa6.72□□□□□ -1.33
IFT20-216ENST00000588477 SPRR2EP22531 72 aa6.7□□□□□ -1.34
IFT20-216ENST00000588477 SPRR2BP35325 72 aa6.7□□□□□ -1.34
IFT20-216ENST00000588477 SPRR2AP35326 72 aa6.7□□□□□ -1.34
IFT20-216ENST00000588477 NREPQ16612 68 aa6.69□□□□□ -1.34
IFT20-216ENST00000588477 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
IFT20-216ENST00000588477 CSAG1Q6PB30 78 aa6.68□□□□□ -1.34
IFT20-216ENST00000588477 S4R3F8 94 aa6.68□□□□□ -1.34
IFT20-216ENST00000588477 LOC110117498A0A087WWA1 95 aa6.67□□□□□ -1.34
IFT20-216ENST00000588477 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
IFT20-216ENST00000588477 K7EQZ3 153 aa6.67□□□□□ -1.34
IFT20-216ENST00000588477 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
IFT20-216ENST00000588477 LCA10Q71F78 164 aa6.64□□□□□ -1.35
IFT20-216ENST00000588477 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
IFT20-216ENST00000588477 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
IFT20-216ENST00000588477 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
IFT20-216ENST00000588477 PDE6GP18545 87 aa6.63□□□□□ -1.35
IFT20-216ENST00000588477 C14orf132Q9NPU4 83 aa6.63□□□□□ -1.35
IFT20-216ENST00000588477 HCG22E2RYF7 251 aa6.57□□□□□ -1.36
IFT20-216ENST00000588477 ATXN8Q156A1 80 aa6.57□□□□□ -1.36
IFT20-216ENST00000588477 C1orf64Q8NEQ6 169 aa6.56□□□□□ -1.36
IFT20-216ENST00000588477 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
IFT20-216ENST00000588477 CASC2Q6XLA1 102 aa6.53□□□□□ -1.36
IFT20-216ENST00000588477 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
IFT20-216ENST00000588477 BPY2O14599 106 aa6.51□□□□□ -1.37
IFT20-216ENST00000588477 CXCL6P80162 114 aa6.51□□□□□ -1.37
IFT20-216ENST00000588477 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
IFT20-216ENST00000588477 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
IFT20-216ENST00000588477 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
IFT20-216ENST00000588477 Q8N9L7 120 aa6.49□□□□□ -1.37
IFT20-216ENST00000588477 NAA38Q9BRA0 125 aaKnown RBP6.49□□□□□ -1.37
IFT20-216ENST00000588477 UQCR10Q9UDW1 63 aa6.49□□□□□ -1.37
IFT20-216ENST00000588477 SPRR2DP22532 72 aa6.48□□□□□ -1.37
IFT20-216ENST00000588477 PYY3Q5JQD4 70 aa6.47□□□□□ -1.37
IFT20-216ENST00000588477 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
IFT20-216ENST00000588477 MT1XP80297 61 aa6.41□□□□□ -1.38
IFT20-216ENST00000588477 A0A087WVE0 104 aa6.37□□□□□ -1.39
IFT20-216ENST00000588477 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms