RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 IGKV4-1P06312 121 aa5.73□□□□□ -1.49
BRCA1-225ENST00000586385 FABP2P12104 132 aa5.73□□□□□ -1.49
BRCA1-225ENST00000586385 GTF2H5Q6ZYL4 71 aa5.73□□□□□ -1.49
BRCA1-225ENST00000586385 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
BRCA1-225ENST00000586385 H0YGX0 51 aa5.72□□□□□ -1.49
BRCA1-225ENST00000586385 PSMB2P49721 201 aa5.72□□□□□ -1.49
BRCA1-225ENST00000586385 LINC00846Q9NV44 126 aa5.72□□□□□ -1.49
BRCA1-225ENST00000586385 SCGB1C2P0DMR2 95 aa5.71□□□□□ -1.5
BRCA1-225ENST00000586385 DEFB116Q30KQ4 102 aa5.71□□□□□ -1.5
BRCA1-225ENST00000586385 LINC00472Q9H8W2 130 aa5.71□□□□□ -1.5
BRCA1-225ENST00000586385 A0A1B0GX51 115 aa5.69□□□□□ -1.5
BRCA1-225ENST00000586385 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
BRCA1-225ENST00000586385 TRBV7-4A0A0J9YYF1 115 aa5.67□□□□□ -1.5
BRCA1-225ENST00000586385 A0A1W2PPM0 123 aa5.67□□□□□ -1.5
BRCA1-225ENST00000586385 TAX1BP3O14907 124 aa5.67□□□□□ -1.5
BRCA1-225ENST00000586385 ATXN8Q156A1 80 aa5.67□□□□□ -1.5
BRCA1-225ENST00000586385 DNAL4O96015 105 aa5.66□□□□□ -1.5
BRCA1-225ENST00000586385 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-225ENST00000586385 SPINK7P58062 85 aa5.65□□□□□ -1.5
BRCA1-225ENST00000586385 C21orf62-AS1Q17RA5 79 aa5.65□□□□□ -1.5
BRCA1-225ENST00000586385 A0A1B0GV72 72 aa5.64□□□□□ -1.51
BRCA1-225ENST00000586385 A8MWP4 228 aa5.64□□□□□ -1.51
BRCA1-225ENST00000586385 K7ERJ3 54 aa5.64□□□□□ -1.51
BRCA1-225ENST00000586385 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
BRCA1-225ENST00000586385 SPCS1Q9Y6A9 102 aa5.64□□□□□ -1.51
BRCA1-225ENST00000586385 TRACP01848 142 aa5.63□□□□□ -1.51
BRCA1-225ENST00000586385 MTURNQ8N3F0 131 aa5.63□□□□□ -1.51
BRCA1-225ENST00000586385 ANKRD29Q8N6D5 301 aa5.63□□□□□ -1.51
BRCA1-225ENST00000586385 NEBP20929 6669 aa5.62□□□□□ -1.51
BRCA1-225ENST00000586385 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
BRCA1-225ENST00000586385 F8W1H4 67 aa5.61□□□□□ -1.51
BRCA1-225ENST00000586385 K7EP34 96 aa5.61□□□□□ -1.51
BRCA1-225ENST00000586385 TRIAP1O43715 76 aa5.61□□□□□ -1.51
BRCA1-225ENST00000586385 C8orf87E5RJ46 101 aa5.6□□□□□ -1.51
BRCA1-225ENST00000586385 UBE2V1Q13404 147 aa5.6□□□□□ -1.51
BRCA1-225ENST00000586385 CCKP06307 115 aa5.59□□□□□ -1.51
BRCA1-225ENST00000586385 TMEM256-PLSCR3K7ERE1 68 aa5.58□□□□□ -1.52
BRCA1-225ENST00000586385 WFDC13Q8IUB5 93 aa5.58□□□□□ -1.52
BRCA1-225ENST00000586385 H3BT86 120 aa5.57□□□□□ -1.52
BRCA1-225ENST00000586385 ORMDL1Q9P0S3 153 aa5.57□□□□□ -1.52
BRCA1-225ENST00000586385 A0A1B0GV90 55 aa5.55□□□□□ -1.52
BRCA1-225ENST00000586385 J3QR89 54 aa5.55□□□□□ -1.52
BRCA1-225ENST00000586385 JMJD7-PLA2G4BH0Y9G9 81 aa5.53□□□□□ -1.52
BRCA1-225ENST00000586385 PDE6GP18545 87 aa5.53□□□□□ -1.52
BRCA1-225ENST00000586385 C9JAW5 83 aa5.52□□□□□ -1.53
BRCA1-225ENST00000586385 NAA38Q9BRA0 125 aaKnown RBP5.52□□□□□ -1.53
BRCA1-225ENST00000586385 BAALC-AS2P0C853 105 aa5.51□□□□□ -1.53
BRCA1-225ENST00000586385 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
BRCA1-225ENST00000586385 VPS25Q9BRG1 176 aa5.49□□□□□ -1.53
BRCA1-225ENST00000586385 A0A1B0GW54 56 aa5.47□□□□□ -1.53
BRCA1-225ENST00000586385 J3KT08 172 aa5.47□□□□□ -1.53
BRCA1-225ENST00000586385 H1FX-AS1Q4G0G2 97 aa5.47□□□□□ -1.53
BRCA1-225ENST00000586385 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
BRCA1-225ENST00000586385 K7ERU9 68 aa5.46□□□□□ -1.54
BRCA1-225ENST00000586385 MT1BP07438 61 aa5.46□□□□□ -1.54
BRCA1-225ENST00000586385 Q6ZQT0 140 aa5.46□□□□□ -1.54
BRCA1-225ENST00000586385 DSCR8Q96T75 97 aa5.46□□□□□ -1.54
BRCA1-225ENST00000586385 IGKV3D-7A0A0C4DH55 119 aa5.45□□□□□ -1.54
BRCA1-225ENST00000586385 ACYP1P07311 99 aa5.45□□□□□ -1.54
BRCA1-225ENST00000586385 RBM3P98179 157 aaKnown RBP5.45□□□□□ -1.54
BRCA1-225ENST00000586385 KRTAP20-1Q3LI63 56 aa5.45□□□□□ -1.54
BRCA1-225ENST00000586385 PRO0461Q9UI25 63 aa5.44□□□□□ -1.54
BRCA1-225ENST00000586385 A6NN06 94 aa5.42□□□□□ -1.54
BRCA1-225ENST00000586385 ETDBQ3ZM63 59 aa5.42□□□□□ -1.54
BRCA1-225ENST00000586385 Q6ZVQ6 151 aa5.42□□□□□ -1.54
BRCA1-225ENST00000586385 NDUFB1O75438 58 aa5.41□□□□□ -1.54
BRCA1-225ENST00000586385 FAM240AA0A1B0GVK7 77 aa5.4□□□□□ -1.54
BRCA1-225ENST00000586385 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
BRCA1-225ENST00000586385 KRTAP5-9P26371 169 aa5.39□□□□□ -1.55
BRCA1-225ENST00000586385 MMP24-AS1A0A0U1RRL7 71 aa5.37□□□□□ -1.55
BRCA1-225ENST00000586385 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
BRCA1-225ENST00000586385 PRR15Q8IV56 129 aa5.37□□□□□ -1.55
BRCA1-225ENST00000586385 SMCPP49901 116 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-225ENST00000586385 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
BRCA1-225ENST00000586385 KMT2DO14686 5537 aa5.36□□□□□ -1.55
BRCA1-225ENST00000586385 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
BRCA1-225ENST00000586385 Q5W150 140 aa5.34□□□□□ -1.55
BRCA1-225ENST00000586385 TMEM254Q8TBM7 123 aa5.34□□□□□ -1.55
BRCA1-225ENST00000586385 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
BRCA1-225ENST00000586385 MDN1Q9NU22 5596 aa5.34□□□□□ -1.56
BRCA1-225ENST00000586385 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
BRCA1-225ENST00000586385 C14orf132Q9NPU4 83 aa5.33□□□□□ -1.56
BRCA1-225ENST00000586385 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
BRCA1-225ENST00000586385 IGKV2-30P06310 120 aa5.32□□□□□ -1.56
BRCA1-225ENST00000586385 Q5VV11 94 aa5.32□□□□□ -1.56
BRCA1-225ENST00000586385 ATP5EP2Q5VTU8 51 aa5.31□□□□□ -1.56
BRCA1-225ENST00000586385 C5orf47Q569G3 176 aa5.29□□□□□ -1.56
BRCA1-225ENST00000586385 hDV103S1A0JD37 113 aa5.28□□□□□ -1.56
BRCA1-225ENST00000586385 K7EQZ3 153 aa5.28□□□□□ -1.56
BRCA1-225ENST00000586385 C4orf26Q17RF5 130 aa5.28□□□□□ -1.56
BRCA1-225ENST00000586385 C7orf65Q6ZTY9 151 aa5.28□□□□□ -1.56
BRCA1-225ENST00000586385 NREPQ16612 68 aa5.27□□□□□ -1.57
BRCA1-225ENST00000586385 LINC00643Q86TS7 51 aa5.27□□□□□ -1.57
BRCA1-225ENST00000586385 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
BRCA1-225ENST00000586385 FAM236AA0A1B0GUQ0 79 aa5.26□□□□□ -1.57
BRCA1-225ENST00000586385 FAM236BA0A1B0GV22 79 aa5.26□□□□□ -1.57
BRCA1-225ENST00000586385 NDUFS5O43920 106 aa5.26□□□□□ -1.57
BRCA1-225ENST00000586385 IMUPQ9GZP8 106 aa5.24□□□□□ -1.57
BRCA1-225ENST00000586385 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
BRCA1-225ENST00000586385 CXCL6P80162 114 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms